RNA–Protein interactions for RNA: ENST00000601708.1

LINC01233-203, Transcript of long intergenic non-protein coding RNA 1233, humanhuman

TSL 3 BASIC

Gene LINC01233, Length 494 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01233-203ENST00000601708 SHANK2Q9UPX8 1470 aa23.44■■□□□ 1.34
LINC01233-203ENST00000601708 TOM1O60784 492 aa23.44■■□□□ 1.34
LINC01233-203ENST00000601708 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
LINC01233-203ENST00000601708 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
LINC01233-203ENST00000601708 MTUS2Q5JR59 1369 aa23.41■■□□□ 1.34
LINC01233-203ENST00000601708 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
LINC01233-203ENST00000601708 TNRQ92752 1358 aa23.4■■□□□ 1.34
LINC01233-203ENST00000601708 PZPP20742 1482 aa23.4■■□□□ 1.34
LINC01233-203ENST00000601708 PIP4K2BP78356 416 aa23.39■■□□□ 1.33
LINC01233-203ENST00000601708 VWDEQ8N2E2 1590 aa23.38■■□□□ 1.33
LINC01233-203ENST00000601708 KIF3BO15066 747 aa23.36■■□□□ 1.33
LINC01233-203ENST00000601708 ANKLE2Q86XL3 938 aa23.36■■□□□ 1.33
LINC01233-203ENST00000601708 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
LINC01233-203ENST00000601708 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
LINC01233-203ENST00000601708 MED14O60244 1454 aa23.36■■□□□ 1.33
LINC01233-203ENST00000601708 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
LINC01233-203ENST00000601708 DEPDC5O75140 1603 aa23.35■■□□□ 1.33
LINC01233-203ENST00000601708 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
LINC01233-203ENST00000601708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.34■■□□□ 1.33
LINC01233-203ENST00000601708 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
LINC01233-203ENST00000601708 CEP162Q5TB80 1403 aa23.33■■□□□ 1.32
LINC01233-203ENST00000601708 MIA2Q96PC5 1412 aa23.33■■□□□ 1.32
LINC01233-203ENST00000601708 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
LINC01233-203ENST00000601708 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
LINC01233-203ENST00000601708 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
LINC01233-203ENST00000601708 UGGT1Q9NYU2 1555 aa23.3■■□□□ 1.32
LINC01233-203ENST00000601708 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
LINC01233-203ENST00000601708 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
LINC01233-203ENST00000601708 STRCP1A6NGW2 1772 aa23.27■■□□□ 1.32
LINC01233-203ENST00000601708 IQGAP1P46940 1657 aa23.27■■□□□ 1.32
LINC01233-203ENST00000601708 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
LINC01233-203ENST00000601708 LRRC7Q96NW7 1537 aa23.22■■□□□ 1.31
LINC01233-203ENST00000601708 ARHGEF5Q12774 1597 aa23.22■■□□□ 1.31
LINC01233-203ENST00000601708 RNF17Q9BXT8 1623 aaKnown RBP23.2■■□□□ 1.3
LINC01233-203ENST00000601708 NCOA2Q15596 1464 aa23.2■■□□□ 1.3
LINC01233-203ENST00000601708 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
LINC01233-203ENST00000601708 ZC3H13Q5T200 1668 aaKnown RBP23.18■■□□□ 1.3
LINC01233-203ENST00000601708 SYNMO15061 1565 aa23.18■■□□□ 1.3
LINC01233-203ENST00000601708 ABCC3O15438 1527 aa23.16■■□□□ 1.3
LINC01233-203ENST00000601708 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
LINC01233-203ENST00000601708 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
LINC01233-203ENST00000601708 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.29
LINC01233-203ENST00000601708 UBR1Q8IWV7 1749 aa23.13■■□□□ 1.29
LINC01233-203ENST00000601708 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
LINC01233-203ENST00000601708 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
LINC01233-203ENST00000601708 EIF2AK4Q9P2K8 1649 aaKnown RBP23.11■■□□□ 1.29
LINC01233-203ENST00000601708 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
LINC01233-203ENST00000601708 MROH1Q8NDA8 1641 aa23.1■■□□□ 1.29
LINC01233-203ENST00000601708 RGS17Q9UGC6 210 aaPredicted RBP23.09■■□□□ 1.29
LINC01233-203ENST00000601708 SCAF11Q99590 1463 aaKnown RBP23.06■■□□□ 1.28
LINC01233-203ENST00000601708 ARHGAP23Q9P227 1491 aa23.06■■□□□ 1.28
LINC01233-203ENST00000601708 CEP152O94986 1710 aa23.06■■□□□ 1.28
LINC01233-203ENST00000601708 SLIT1O75093 1534 aa23.06■■□□□ 1.28
LINC01233-203ENST00000601708 LTKP29376 864 aa23.04■■□□□ 1.28
LINC01233-203ENST00000601708 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
LINC01233-203ENST00000601708 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
LINC01233-203ENST00000601708 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
LINC01233-203ENST00000601708 FAM135BQ49AJ0 1406 aa22.99■■□□□ 1.27
LINC01233-203ENST00000601708 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
LINC01233-203ENST00000601708 DUOX2Q9NRD8 1548 aa22.97■■□□□ 1.27
LINC01233-203ENST00000601708 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
LINC01233-203ENST00000601708 EID1Q9Y6B2 187 aa22.94■■□□□ 1.26
LINC01233-203ENST00000601708 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
LINC01233-203ENST00000601708 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
LINC01233-203ENST00000601708 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
LINC01233-203ENST00000601708 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
LINC01233-203ENST00000601708 POTEAQ6S8J7 498 aa22.9■■□□□ 1.26
LINC01233-203ENST00000601708 TMEM94Q12767 1356 aa22.89■■□□□ 1.25
LINC01233-203ENST00000601708 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
LINC01233-203ENST00000601708 TET3O43151 1660 aa22.88■■□□□ 1.25
LINC01233-203ENST00000601708 KCNA6P17658 529 aa22.88■■□□□ 1.25
LINC01233-203ENST00000601708 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
LINC01233-203ENST00000601708 ROBO1Q9Y6N7 1651 aa22.87■■□□□ 1.25
LINC01233-203ENST00000601708 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
LINC01233-203ENST00000601708 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
LINC01233-203ENST00000601708 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
LINC01233-203ENST00000601708 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
LINC01233-203ENST00000601708 EFCAB6Q5THR3 1501 aa22.84■■□□□ 1.25
LINC01233-203ENST00000601708 IDI1Q13907 227 aa22.83■■□□□ 1.25
LINC01233-203ENST00000601708 ABCC5O15440 1437 aa22.82■■□□□ 1.24
LINC01233-203ENST00000601708 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
LINC01233-203ENST00000601708 LMTK2Q8IWU2 1503 aa22.81■■□□□ 1.24
LINC01233-203ENST00000601708 PROSER2Q86WR7 435 aaPredicted RBP22.8■■□□□ 1.24
LINC01233-203ENST00000601708 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
LINC01233-203ENST00000601708 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
LINC01233-203ENST00000601708 SLC26A8Q96RN1 970 aa22.79■■□□□ 1.24
LINC01233-203ENST00000601708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.24
LINC01233-203ENST00000601708 NKTRP30414 1462 aaKnown RBP22.78■■□□□ 1.24
LINC01233-203ENST00000601708 KANK1Q14678 1352 aa22.77■■□□□ 1.24
LINC01233-203ENST00000601708 NOS1P29475 1434 aa22.76■■□□□ 1.23
LINC01233-203ENST00000601708 RBM33Q96EV2 1170 aaKnown RBP22.76■■□□□ 1.23
LINC01233-203ENST00000601708 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
LINC01233-203ENST00000601708 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
LINC01233-203ENST00000601708 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
LINC01233-203ENST00000601708 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
LINC01233-203ENST00000601708 DAPK1P53355 1430 aa22.73■■□□□ 1.23
LINC01233-203ENST00000601708 ADGRB3O60242 1522 aa22.72■■□□□ 1.23
LINC01233-203ENST00000601708 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
LINC01233-203ENST00000601708 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
LINC01233-203ENST00000601708 MSH6P52701 1360 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms