RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
CHMP2A-208ENST00000601220 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
CHMP2A-208ENST00000601220 TSPY4P0CV99 314 aa28.58■■■□□ 2.17
CHMP2A-208ENST00000601220 TSPY10P0CW01 314 aa28.58■■■□□ 2.17
CHMP2A-208ENST00000601220 A2ML1A8K2U0 1454 aa28.56■■■□□ 2.16
CHMP2A-208ENST00000601220 FAM135AQ9P2D6 1515 aa28.54■■■□□ 2.16
CHMP2A-208ENST00000601220 KDM5DQ9BY66 1539 aa28.53■■■□□ 2.16
CHMP2A-208ENST00000601220 IQSEC2Q5JU85 1478 aa28.53■■■□□ 2.16
CHMP2A-208ENST00000601220 WASHC2CQ9Y4E1 1318 aa28.53■■■□□ 2.16
CHMP2A-208ENST00000601220 PZPP20742 1482 aa28.53■■■□□ 2.16
CHMP2A-208ENST00000601220 ZNF335Q9H4Z2 1342 aaPredicted RBP28.52■■■□□ 2.16
CHMP2A-208ENST00000601220 TNRQ92752 1358 aa28.51■■■□□ 2.16
CHMP2A-208ENST00000601220 DNMT1P26358 1616 aaKnown RBP28.51■■■□□ 2.15
CHMP2A-208ENST00000601220 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
CHMP2A-208ENST00000601220 MYOM3Q5VTT5 1437 aa28.49■■■□□ 2.15
CHMP2A-208ENST00000601220 MAST1Q9Y2H9 1570 aa28.49■■■□□ 2.15
CHMP2A-208ENST00000601220 RNF17Q9BXT8 1623 aaKnown RBP28.41■■■□□ 2.14
CHMP2A-208ENST00000601220 ABCC3O15438 1527 aa28.38■■■□□ 2.13
CHMP2A-208ENST00000601220 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
CHMP2A-208ENST00000601220 NEURL4Q96JN8 1562 aa28.37■■■□□ 2.13
CHMP2A-208ENST00000601220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.37■■■□□ 2.13
CHMP2A-208ENST00000601220 THEMISQ8N1K5 641 aaPredicted RBP28.36■■■□□ 2.13
CHMP2A-208ENST00000601220 MROH1Q8NDA8 1641 aa28.35■■■□□ 2.13
CHMP2A-208ENST00000601220 EIF2AK4Q9P2K8 1649 aaKnown RBP28.34■■■□□ 2.13
CHMP2A-208ENST00000601220 ABCC5O15440 1437 aa28.34■■■□□ 2.13
CHMP2A-208ENST00000601220 ANKLE2Q86XL3 938 aa28.33■■■□□ 2.13
CHMP2A-208ENST00000601220 SPATA31D1Q6ZQQ2 1576 aa28.32■■■□□ 2.12
CHMP2A-208ENST00000601220 DUOX2Q9NRD8 1548 aa28.31■■■□□ 2.12
CHMP2A-208ENST00000601220 UGGT1Q9NYU2 1555 aa28.31■■■□□ 2.12
CHMP2A-208ENST00000601220 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
CHMP2A-208ENST00000601220 ZC3H13Q5T200 1668 aaKnown RBP28.29■■■□□ 2.12
CHMP2A-208ENST00000601220 MED14O60244 1454 aa28.28■■■□□ 2.12
CHMP2A-208ENST00000601220 ERVK-7P63135 1459 aa28.28■■■□□ 2.12
CHMP2A-208ENST00000601220 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
CHMP2A-208ENST00000601220 KIF15Q9NS87 1388 aa28.27■■■□□ 2.12
CHMP2A-208ENST00000601220 DISP3Q9P2K9 1392 aa28.27■■■□□ 2.12
CHMP2A-208ENST00000601220 POLR1AO95602 1720 aaPredicted RBP28.27■■■□□ 2.12
CHMP2A-208ENST00000601220 APLP2Q06481 763 aa28.26■■■□□ 2.11
CHMP2A-208ENST00000601220 RRP7BPQ9NSQ0 103 aa28.25■■■□□ 2.11
CHMP2A-208ENST00000601220 PTPN23Q9H3S7 1636 aa28.25■■■□□ 2.11
CHMP2A-208ENST00000601220 ILDR2Q71H61 639 aa28.24■■■□□ 2.11
CHMP2A-208ENST00000601220 NPHP4O75161 1426 aaPredicted RBP28.24■■■□□ 2.11
CHMP2A-208ENST00000601220 DAPK1P53355 1430 aa28.24■■■□□ 2.11
CHMP2A-208ENST00000601220 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
CHMP2A-208ENST00000601220 ERBINQ96RT1 1412 aa28.23■■■□□ 2.11
CHMP2A-208ENST00000601220 DEPDC5O75140 1603 aa28.22■■■□□ 2.11
CHMP2A-208ENST00000601220 VWDEQ8N2E2 1590 aa28.22■■■□□ 2.11
CHMP2A-208ENST00000601220 CPS1P31327 1500 aa28.22■■■□□ 2.11
CHMP2A-208ENST00000601220 ARHGAP31Q2M1Z3 1444 aa28.2■■■□□ 2.11
CHMP2A-208ENST00000601220 PRDM15P57071 1507 aaPredicted RBP28.19■■■□□ 2.1
CHMP2A-208ENST00000601220 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
CHMP2A-208ENST00000601220 CEP152O94986 1710 aa28.18■■■□□ 2.1
CHMP2A-208ENST00000601220 CHIC2Q9UKJ5 165 aa28.13■■■□□ 2.09
CHMP2A-208ENST00000601220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.12■■■□□ 2.091e-7■■■■□ 21.9
CHMP2A-208ENST00000601220 ANKRD30AQ9BXX3 1397 aa28.11■■■□□ 2.09
CHMP2A-208ENST00000601220 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
CHMP2A-208ENST00000601220 LTKP29376 864 aa28.1■■■□□ 2.09
CHMP2A-208ENST00000601220 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
CHMP2A-208ENST00000601220 ARHGAP23Q9P227 1491 aa28.09■■■□□ 2.09
CHMP2A-208ENST00000601220 TOM1O60784 492 aa28.09■■■□□ 2.09
CHMP2A-208ENST00000601220 SLIT1O75093 1534 aa28.07■■■□□ 2.08
CHMP2A-208ENST00000601220 LMTK2Q8IWU2 1503 aa28.06■■■□□ 2.08
CHMP2A-208ENST00000601220 HSPA1LP34931 641 aa28.05■■■□□ 2.08
CHMP2A-208ENST00000601220 PIP4K2BP78356 416 aa28.05■■■□□ 2.08
CHMP2A-208ENST00000601220 KANK1Q14678 1352 aa28.05■■■□□ 2.08
CHMP2A-208ENST00000601220 SCAF11Q99590 1463 aaKnown RBP28.05■■■□□ 2.08
CHMP2A-208ENST00000601220 ALKQ9UM73 1620 aa28.05■■■□□ 2.08
CHMP2A-208ENST00000601220 CFAP65Q6ZU64 1925 aaKnown RBP28.04■■■□□ 2.08
CHMP2A-208ENST00000601220 TXNDC2Q86VQ3 553 aa28.04■■■□□ 2.08
CHMP2A-208ENST00000601220 ADGRL2O95490 1459 aa28.03■■■□□ 2.08
CHMP2A-208ENST00000601220 STRCP1A6NGW2 1772 aa28.03■■■□□ 2.08
CHMP2A-208ENST00000601220 LRRC7Q96NW7 1537 aa28.02■■■□□ 2.08
CHMP2A-208ENST00000601220 SOCS7O14512 581 aa28.02■■■□□ 2.08
CHMP2A-208ENST00000601220 IDI1Q13907 227 aa28.01■■■□□ 2.07
CHMP2A-208ENST00000601220 SCAF1Q9H7N4 1312 aaKnown RBP27.99■■■□□ 2.07
CHMP2A-208ENST00000601220 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
CHMP2A-208ENST00000601220 PIK3C2BO00750 1634 aa27.97■■■□□ 2.07
CHMP2A-208ENST00000601220 FAM50AQ14320 339 aaKnown RBP27.97■■■□□ 2.07
CHMP2A-208ENST00000601220 NOS1P29475 1434 aa27.97■■■□□ 2.07
CHMP2A-208ENST00000601220 EID1Q9Y6B2 187 aa27.95■■■□□ 2.06
CHMP2A-208ENST00000601220 SYNMO15061 1565 aa27.93■■■□□ 2.06
CHMP2A-208ENST00000601220 EFCAB6Q5THR3 1501 aa27.92■■■□□ 2.06
CHMP2A-208ENST00000601220 ANKRD50Q9ULJ7 1429 aa27.92■■■□□ 2.06
CHMP2A-208ENST00000601220 STAG3Q9UJ98 1225 aa27.9■■■□□ 2.06
CHMP2A-208ENST00000601220 KDM5AP29375 1690 aaKnown RBP27.89■■■□□ 2.06
CHMP2A-208ENST00000601220 SLC52A1Q9NWF4 448 aa27.87■■■□□ 2.05
CHMP2A-208ENST00000601220 TET3O43151 1660 aa27.84■■■□□ 2.05
CHMP2A-208ENST00000601220 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.05
CHMP2A-208ENST00000601220 ADGRB3O60242 1522 aa27.82■■■□□ 2.04
CHMP2A-208ENST00000601220 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
CHMP2A-208ENST00000601220 KCNA6P17658 529 aa27.8■■■□□ 2.04
CHMP2A-208ENST00000601220 SLC26A8Q96RN1 970 aa27.8■■■□□ 2.04
CHMP2A-208ENST00000601220 ROCK1Q13464 1354 aa27.78■■■□□ 2.04
CHMP2A-208ENST00000601220 XIRP1Q702N8 1843 aaKnown RBP27.77■■■□□ 2.04
CHMP2A-208ENST00000601220 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
CHMP2A-208ENST00000601220 TMEM94Q12767 1356 aa27.75■■■□□ 2.03
CHMP2A-208ENST00000601220 UNC13BO14795 1591 aa27.73■■■□□ 2.03
CHMP2A-208ENST00000601220 SENP3Q9H4L4 574 aaPredicted RBP27.72■■■□□ 2.03
CHMP2A-208ENST00000601220 FAM135BQ49AJ0 1406 aa27.69■■■□□ 2.02
CHMP2A-208ENST00000601220 PROSER2Q86WR7 435 aaPredicted RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms