RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
PSMC4-205ENST00000601194 CLTCQ00610 1675 aaKnown RBP21.93■■□□□ 1.1
PSMC4-205ENST00000601194 ZMYM3Q14202 1370 aa21.93■■□□□ 1.1
PSMC4-205ENST00000601194 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
PSMC4-205ENST00000601194 ERBINQ96RT1 1412 aa21.93■■□□□ 1.1
PSMC4-205ENST00000601194 RNF17Q9BXT8 1623 aaKnown RBP21.93■■□□□ 1.1
PSMC4-205ENST00000601194 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
PSMC4-205ENST00000601194 PTPRKQ15262 1439 aa21.92■■□□□ 1.1
PSMC4-205ENST00000601194 RRBP1Q9P2E9 1410 aaKnown RBP21.91■■□□□ 1.1
PSMC4-205ENST00000601194 KDM5DQ9BY66 1539 aa21.9■■□□□ 1.1
PSMC4-205ENST00000601194 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.09
PSMC4-205ENST00000601194 NPATQ14207 1427 aa21.87■■□□□ 1.09
PSMC4-205ENST00000601194 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
PSMC4-205ENST00000601194 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
PSMC4-205ENST00000601194 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
PSMC4-205ENST00000601194 ABCC3O15438 1527 aa21.84■■□□□ 1.09
PSMC4-205ENST00000601194 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
PSMC4-205ENST00000601194 UHRF1BP1Q6BDS2 1440 aa21.82■■□□□ 1.08
PSMC4-205ENST00000601194 SETD1BQ9UPS6 1966 aaKnown RBP21.82■■□□□ 1.08
PSMC4-205ENST00000601194 DEPDC5O75140 1603 aa21.82■■□□□ 1.08
PSMC4-205ENST00000601194 ITGAEP38570 1179 aa21.81■■□□□ 1.08
PSMC4-205ENST00000601194 PZPP20742 1482 aa21.81■■□□□ 1.08
PSMC4-205ENST00000601194 ZC3H13Q5T200 1668 aaKnown RBP21.81■■□□□ 1.08
PSMC4-205ENST00000601194 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
PSMC4-205ENST00000601194 HSPA2P54652 639 aa21.79■■□□□ 1.08
PSMC4-205ENST00000601194 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
PSMC4-205ENST00000601194 FBXO31Q5XUX0 539 aaPredicted RBP21.75■■□□□ 1.07
PSMC4-205ENST00000601194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
PSMC4-205ENST00000601194 CEP152O94986 1710 aa21.75■■□□□ 1.07
PSMC4-205ENST00000601194 KANK1Q14678 1352 aa21.74■■□□□ 1.07
PSMC4-205ENST00000601194 CAMSAP1Q5T5Y3 1602 aa21.73■■□□□ 1.07
PSMC4-205ENST00000601194 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
PSMC4-205ENST00000601194 TNRQ92752 1358 aa21.72■■□□□ 1.07
PSMC4-205ENST00000601194 LMTK2Q8IWU2 1503 aa21.71■■□□□ 1.07
PSMC4-205ENST00000601194 ARHGAP31Q2M1Z3 1444 aa21.71■■□□□ 1.07
PSMC4-205ENST00000601194 ZNF142P52746 1687 aaPredicted RBP21.69■■□□□ 1.06
PSMC4-205ENST00000601194 ERVK-7P63135 1459 aa21.69■■□□□ 1.06
PSMC4-205ENST00000601194 SPATA31D1Q6ZQQ2 1576 aa21.69■■□□□ 1.06
PSMC4-205ENST00000601194 CEP170BQ9Y4F5 1589 aaPredicted RBP21.69■■□□□ 1.06
PSMC4-205ENST00000601194 UNC13BO14795 1591 aa21.68■■□□□ 1.06
PSMC4-205ENST00000601194 A2ML1A8K2U0 1454 aa21.66■■□□□ 1.06
PSMC4-205ENST00000601194 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
PSMC4-205ENST00000601194 NAIPQ13075 1403 aa21.64■■□□□ 1.06
PSMC4-205ENST00000601194 NLRP1Q9C000 1473 aa21.64■■□□□ 1.05
PSMC4-205ENST00000601194 HFM1A2PYH4 1435 aa21.62■■□□□ 1.05
PSMC4-205ENST00000601194 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
PSMC4-205ENST00000601194 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
PSMC4-205ENST00000601194 TET3O43151 1660 aa21.59■■□□□ 1.05
PSMC4-205ENST00000601194 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.05
PSMC4-205ENST00000601194 PLA2R1Q13018 1463 aa21.58■■□□□ 1.05
PSMC4-205ENST00000601194 NUP155O75694 1391 aa21.58■■□□□ 1.04
PSMC4-205ENST00000601194 RPRD2Q5VT52 1461 aaKnown RBP21.58■■□□□ 1.04
PSMC4-205ENST00000601194 NOS1P29475 1434 aa21.55■■□□□ 1.04
PSMC4-205ENST00000601194 CFAP65Q6ZU64 1925 aaKnown RBP21.55■■□□□ 1.04
PSMC4-205ENST00000601194 UGGT1Q9NYU2 1555 aa21.55■■□□□ 1.04
PSMC4-205ENST00000601194 SYNMO15061 1565 aa21.53■■□□□ 1.04
PSMC4-205ENST00000601194 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
PSMC4-205ENST00000601194 PTPRTO14522 1441 aa21.52■■□□□ 1.04
PSMC4-205ENST00000601194 THEMISQ8N1K5 641 aaPredicted RBP21.51■■□□□ 1.03
PSMC4-205ENST00000601194 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
PSMC4-205ENST00000601194 PKD2Q13563 968 aa21.5■■□□□ 1.03
PSMC4-205ENST00000601194 E9PCH4 1651 aa21.5■■□□□ 1.03
PSMC4-205ENST00000601194 UBR1Q8IWV7 1749 aa21.48■■□□□ 1.03
PSMC4-205ENST00000601194 IDI1Q13907 227 aa21.47■■□□□ 1.03
PSMC4-205ENST00000601194 PIK3C2BO00750 1634 aa21.47■■□□□ 1.03
PSMC4-205ENST00000601194 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
PSMC4-205ENST00000601194 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
PSMC4-205ENST00000601194 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
PSMC4-205ENST00000601194 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
PSMC4-205ENST00000601194 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
PSMC4-205ENST00000601194 ARHGAP23Q9P227 1491 aa21.42■■□□□ 1.02
PSMC4-205ENST00000601194 ADGRB3O60242 1522 aa21.41■■□□□ 1.02
PSMC4-205ENST00000601194 SLIT1O75093 1534 aa21.41■■□□□ 1.02
PSMC4-205ENST00000601194 TRIM52Q96A61 297 aa21.41■■□□□ 1.02
PSMC4-205ENST00000601194 MED14O60244 1454 aa21.39■■□□□ 1.02
PSMC4-205ENST00000601194 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.01
PSMC4-205ENST00000601194 SETD5Q9C0A6 1442 aa21.38■■□□□ 1.01
PSMC4-205ENST00000601194 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
PSMC4-205ENST00000601194 SCAF11Q99590 1463 aaKnown RBP21.37■■□□□ 1.01
PSMC4-205ENST00000601194 NPHP4O75161 1426 aaPredicted RBP21.37■■□□□ 1.01
PSMC4-205ENST00000601194 LTKP29376 864 aa21.35■■□□□ 1.01
PSMC4-205ENST00000601194 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
PSMC4-205ENST00000601194 SPHKAPQ2M3C7 1700 aa21.35■■□□□ 1.01
PSMC4-205ENST00000601194 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
PSMC4-205ENST00000601194 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1.01
PSMC4-205ENST00000601194 IQGAP1P46940 1657 aa21.32■■□□□ 1
PSMC4-205ENST00000601194 EID1Q9Y6B2 187 aa21.32■■□□□ 1
PSMC4-205ENST00000601194 TRPM2O94759 1503 aa21.32■■□□□ 1
PSMC4-205ENST00000601194 LTBP4Q8N2S1 1624 aa21.32■■□□□ 1
PSMC4-205ENST00000601194 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
PSMC4-205ENST00000601194 ZNF335Q9H4Z2 1342 aaPredicted RBP21.3■■□□□ 1
PSMC4-205ENST00000601194 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
PSMC4-205ENST00000601194 ZFYVE9O95405 1425 aa21.29■■□□□ 1
PSMC4-205ENST00000601194 CERKQ8TCT0 537 aa21.29■■□□□ 1
PSMC4-205ENST00000601194 MYO5BQ9ULV0 1848 aa21.27■■□□□ 1
PSMC4-205ENST00000601194 CLTCL1P53675 1640 aa21.27■■□□□ 1
PSMC4-205ENST00000601194 CHGAP10645 457 aaKnown RBP21.27■■□□□ 1
PSMC4-205ENST00000601194 MPHOSPH9Q99550 1183 aa21.27■■□□□ 1
PSMC4-205ENST00000601194 RIMS2Q9UQ26 1411 aa21.26■□□□□ 0.99
PSMC4-205ENST00000601194 FOXD1Q16676 465 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms