RNA–Protein interactions for RNA: ENST00000601138.5

ZNF546-208, Transcript of zinc finger protein 546, humanhuman

TSL 5

Gene ZNF546, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-208ENST00000601138 CLIP1P30622 1438 aa13.93□□□□□ -0.18
ZNF546-208ENST00000601138 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
ZNF546-208ENST00000601138 PREX2Q70Z35 1606 aa13.91□□□□□ -0.18
ZNF546-208ENST00000601138 FOXD1Q16676 465 aa13.91□□□□□ -0.18
ZNF546-208ENST00000601138 TNRQ92752 1358 aa13.91□□□□□ -0.18
ZNF546-208ENST00000601138 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
ZNF546-208ENST00000601138 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
ZNF546-208ENST00000601138 RXRBP28702 533 aa13.9□□□□□ -0.18
ZNF546-208ENST00000601138 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
ZNF546-208ENST00000601138 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
ZNF546-208ENST00000601138 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.19
ZNF546-208ENST00000601138 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
ZNF546-208ENST00000601138 JCADQ9P266 1359 aa13.89□□□□□ -0.19
ZNF546-208ENST00000601138 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
ZNF546-208ENST00000601138 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
ZNF546-208ENST00000601138 GGT6Q6P531 493 aa13.88□□□□□ -0.19
ZNF546-208ENST00000601138 SETBP1Q9Y6X0 1596 aa13.88□□□□□ -0.19
ZNF546-208ENST00000601138 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
ZNF546-208ENST00000601138 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
ZNF546-208ENST00000601138 A2MP01023 1474 aa13.86□□□□□ -0.19
ZNF546-208ENST00000601138 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
ZNF546-208ENST00000601138 LRRC9Q6ZRR7 1453 aa13.85□□□□□ -0.19
ZNF546-208ENST00000601138 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
ZNF546-208ENST00000601138 LRP6O75581 1613 aa13.84□□□□□ -0.19
ZNF546-208ENST00000601138 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
ZNF546-208ENST00000601138 PZPP20742 1482 aa13.83□□□□□ -0.2
ZNF546-208ENST00000601138 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
ZNF546-208ENST00000601138 EP400Q96L91 3159 aa13.83□□□□□ -0.2
ZNF546-208ENST00000601138 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
ZNF546-208ENST00000601138 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
ZNF546-208ENST00000601138 INO80Q9ULG1 1556 aaPredicted RBP13.82□□□□□ -0.2
ZNF546-208ENST00000601138 SPATA31A6Q5VVP1 1343 aa13.82□□□□□ -0.2
ZNF546-208ENST00000601138 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
ZNF546-208ENST00000601138 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
ZNF546-208ENST00000601138 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
ZNF546-208ENST00000601138 MIA2Q96PC5 1412 aa13.8□□□□□ -0.2
ZNF546-208ENST00000601138 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
ZNF546-208ENST00000601138 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
ZNF546-208ENST00000601138 SHPRHQ149N8 1683 aa13.78□□□□□ -0.2
ZNF546-208ENST00000601138 RGS12O14924 1447 aa13.77□□□□□ -0.21
ZNF546-208ENST00000601138 LRP5O75197 1615 aa13.77□□□□□ -0.21
ZNF546-208ENST00000601138 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
ZNF546-208ENST00000601138 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.21
ZNF546-208ENST00000601138 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.21
ZNF546-208ENST00000601138 ZNF777Q9ULD5 760 aaPredicted RBP13.76□□□□□ -0.21
ZNF546-208ENST00000601138 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
ZNF546-208ENST00000601138 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
ZNF546-208ENST00000601138 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
ZNF546-208ENST00000601138 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
ZNF546-208ENST00000601138 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
ZNF546-208ENST00000601138 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
ZNF546-208ENST00000601138 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
ZNF546-208ENST00000601138 NUTM2AQ8IVF1 878 aaPredicted RBP13.74□□□□□ -0.21
ZNF546-208ENST00000601138 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
ZNF546-208ENST00000601138 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
ZNF546-208ENST00000601138 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
ZNF546-208ENST00000601138 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
ZNF546-208ENST00000601138 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
ZNF546-208ENST00000601138 AFF2P51816 1311 aa13.69□□□□□ -0.22
ZNF546-208ENST00000601138 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
ZNF546-208ENST00000601138 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
ZNF546-208ENST00000601138 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
ZNF546-208ENST00000601138 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
ZNF546-208ENST00000601138 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
ZNF546-208ENST00000601138 WASHC2CQ9Y4E1 1318 aa13.67□□□□□ -0.22
ZNF546-208ENST00000601138 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
ZNF546-208ENST00000601138 MSH6P52701 1360 aa13.67□□□□□ -0.22
ZNF546-208ENST00000601138 ABCC3O15438 1527 aa13.66□□□□□ -0.22
ZNF546-208ENST00000601138 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
ZNF546-208ENST00000601138 GPATCH8Q9UKJ3 1502 aaKnown RBP13.66□□□□□ -0.22
ZNF546-208ENST00000601138 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
ZNF546-208ENST00000601138 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
ZNF546-208ENST00000601138 SLIT1O75093 1534 aa13.65□□□□□ -0.22
ZNF546-208ENST00000601138 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
ZNF546-208ENST00000601138 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
ZNF546-208ENST00000601138 ARHGAP23Q9P227 1491 aa13.65□□□□□ -0.22
ZNF546-208ENST00000601138 KCNA6P17658 529 aa13.64□□□□□ -0.23
ZNF546-208ENST00000601138 LTKP29376 864 aa13.64□□□□□ -0.23
ZNF546-208ENST00000601138 TXNDC2Q86VQ3 553 aa13.64□□□□□ -0.23
ZNF546-208ENST00000601138 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
ZNF546-208ENST00000601138 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
ZNF546-208ENST00000601138 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
ZNF546-208ENST00000601138 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
ZNF546-208ENST00000601138 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
ZNF546-208ENST00000601138 KIF3BO15066 747 aa13.62□□□□□ -0.23
ZNF546-208ENST00000601138 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
ZNF546-208ENST00000601138 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
ZNF546-208ENST00000601138 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
ZNF546-208ENST00000601138 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
ZNF546-208ENST00000601138 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
ZNF546-208ENST00000601138 EID1Q9Y6B2 187 aa13.6□□□□□ -0.23
ZNF546-208ENST00000601138 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
ZNF546-208ENST00000601138 YY1P25490 414 aa13.59□□□□□ -0.23
ZNF546-208ENST00000601138 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
ZNF546-208ENST00000601138 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
ZNF546-208ENST00000601138 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
ZNF546-208ENST00000601138 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
ZNF546-208ENST00000601138 TET3O43151 1660 aa13.54□□□□□ -0.24
ZNF546-208ENST00000601138 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
ZNF546-208ENST00000601138 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms