RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 KIF15Q9NS87 1388 aa25.07■■□□□ 1.6
TMEM143-211ENST00000600816 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
TMEM143-211ENST00000600816 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
TMEM143-211ENST00000600816 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
TMEM143-211ENST00000600816 KDM5DQ9BY66 1539 aa25.04■■□□□ 1.6
TMEM143-211ENST00000600816 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
TMEM143-211ENST00000600816 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
TMEM143-211ENST00000600816 SETD1BQ9UPS6 1966 aaKnown RBP25■■□□□ 1.59
TMEM143-211ENST00000600816 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
TMEM143-211ENST00000600816 ANKRD30AQ9BXX3 1397 aa24.99■■□□□ 1.59
TMEM143-211ENST00000600816 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
TMEM143-211ENST00000600816 FAM135AQ9P2D6 1515 aa24.97■■□□□ 1.59
TMEM143-211ENST00000600816 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
TMEM143-211ENST00000600816 MROH1Q8NDA8 1641 aa24.97■■□□□ 1.59
TMEM143-211ENST00000600816 PZPP20742 1482 aa24.96■■□□□ 1.59
TMEM143-211ENST00000600816 ERBINQ96RT1 1412 aa24.96■■□□□ 1.59
TMEM143-211ENST00000600816 ABCC3O15438 1527 aa24.96■■□□□ 1.59
TMEM143-211ENST00000600816 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
TMEM143-211ENST00000600816 TNRQ92752 1358 aa24.93■■□□□ 1.58
TMEM143-211ENST00000600816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.93■■□□□ 1.589e-6■■■□□ 18.9
TMEM143-211ENST00000600816 ADGRL2O95490 1459 aa24.92■■□□□ 1.58
TMEM143-211ENST00000600816 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
TMEM143-211ENST00000600816 STRCQ7RTU9 1775 aa24.92■■□□□ 1.58
TMEM143-211ENST00000600816 CAMSAP1Q5T5Y3 1602 aa24.9■■□□□ 1.58
TMEM143-211ENST00000600816 CEP170BQ9Y4F5 1589 aaPredicted RBP24.89■■□□□ 1.58
TMEM143-211ENST00000600816 NCKAP5LQ9HCH0 1330 aa24.87■■□□□ 1.57
TMEM143-211ENST00000600816 ITGAEP38570 1179 aa24.87■■□□□ 1.57
TMEM143-211ENST00000600816 DMRT2Q9Y5R5 561 aa24.87■■□□□ 1.57
TMEM143-211ENST00000600816 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
TMEM143-211ENST00000600816 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
TMEM143-211ENST00000600816 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
TMEM143-211ENST00000600816 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
TMEM143-211ENST00000600816 CEP152O94986 1710 aa24.83■■□□□ 1.57
TMEM143-211ENST00000600816 PTPRTO14522 1441 aa24.82■■□□□ 1.56
TMEM143-211ENST00000600816 ANKRD50Q9ULJ7 1429 aa24.82■■□□□ 1.56
TMEM143-211ENST00000600816 ERVK-7P63135 1459 aa24.82■■□□□ 1.56
TMEM143-211ENST00000600816 DEPDC5O75140 1603 aa24.81■■□□□ 1.56
TMEM143-211ENST00000600816 KANK1Q14678 1352 aa24.8■■□□□ 1.56
TMEM143-211ENST00000600816 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
TMEM143-211ENST00000600816 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
TMEM143-211ENST00000600816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.79■■□□□ 1.56
TMEM143-211ENST00000600816 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
TMEM143-211ENST00000600816 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
TMEM143-211ENST00000600816 ROCK1Q13464 1354 aa24.77■■□□□ 1.56
TMEM143-211ENST00000600816 PKD2Q13563 968 aa24.76■■□□□ 1.55
TMEM143-211ENST00000600816 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
TMEM143-211ENST00000600816 CERKQ8TCT0 537 aa24.75■■□□□ 1.55
TMEM143-211ENST00000600816 RRBP1Q9P2E9 1410 aaKnown RBP24.74■■□□□ 1.55
TMEM143-211ENST00000600816 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
TMEM143-211ENST00000600816 FBXO41Q8TF61 875 aa24.73■■□□□ 1.55
TMEM143-211ENST00000600816 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
TMEM143-211ENST00000600816 THEMISQ8N1K5 641 aaPredicted RBP24.72■■□□□ 1.55
TMEM143-211ENST00000600816 ZNF335Q9H4Z2 1342 aaPredicted RBP24.66■■□□□ 1.54
TMEM143-211ENST00000600816 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
TMEM143-211ENST00000600816 EFCAB6Q5THR3 1501 aa24.66■■□□□ 1.54
TMEM143-211ENST00000600816 NEURL4Q96JN8 1562 aa24.64■■□□□ 1.54
TMEM143-211ENST00000600816 CFAP65Q6ZU64 1925 aaKnown RBP24.64■■□□□ 1.53
TMEM143-211ENST00000600816 LTBP4Q8N2S1 1624 aa24.64■■□□□ 1.53
TMEM143-211ENST00000600816 IDI1Q13907 227 aa24.62■■□□□ 1.53
TMEM143-211ENST00000600816 UNC13BO14795 1591 aa24.62■■□□□ 1.53
TMEM143-211ENST00000600816 NOS1P29475 1434 aa24.61■■□□□ 1.53
TMEM143-211ENST00000600816 SYNMO15061 1565 aa24.59■■□□□ 1.53
TMEM143-211ENST00000600816 NUP155O75694 1391 aa24.58■■□□□ 1.53
TMEM143-211ENST00000600816 NPHP4O75161 1426 aaPredicted RBP24.58■■□□□ 1.53
TMEM143-211ENST00000600816 UBR1Q8IWV7 1749 aa24.57■■□□□ 1.52
TMEM143-211ENST00000600816 POLR1AO95602 1720 aaPredicted RBP24.56■■□□□ 1.52
TMEM143-211ENST00000600816 LTKP29376 864 aa24.56■■□□□ 1.52
TMEM143-211ENST00000600816 STAG3Q9UJ98 1225 aa24.56■■□□□ 1.52
TMEM143-211ENST00000600816 PIK3C2BO00750 1634 aa24.56■■□□□ 1.52
TMEM143-211ENST00000600816 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
TMEM143-211ENST00000600816 MED14O60244 1454 aa24.55■■□□□ 1.52
TMEM143-211ENST00000600816 TET3O43151 1660 aa24.55■■□□□ 1.52
TMEM143-211ENST00000600816 NAIPQ13075 1403 aa24.54■■□□□ 1.52
TMEM143-211ENST00000600816 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
TMEM143-211ENST00000600816 TXNDC2Q86VQ3 553 aa24.53■■□□□ 1.52
TMEM143-211ENST00000600816 SLC52A1Q9NWF4 448 aa24.52■■□□□ 1.52
TMEM143-211ENST00000600816 SCAF11Q99590 1463 aaKnown RBP24.51■■□□□ 1.51
TMEM143-211ENST00000600816 SLIT1O75093 1534 aa24.51■■□□□ 1.51
TMEM143-211ENST00000600816 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
TMEM143-211ENST00000600816 TMEM2Q9UHN6 1383 aa24.51■■□□□ 1.51
TMEM143-211ENST00000600816 EID1Q9Y6B2 187 aa24.47■■□□□ 1.51
TMEM143-211ENST00000600816 E9PCH4 1651 aa24.46■■□□□ 1.51
TMEM143-211ENST00000600816 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
TMEM143-211ENST00000600816 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
TMEM143-211ENST00000600816 IQGAP1P46940 1657 aa24.46■■□□□ 1.51
TMEM143-211ENST00000600816 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
TMEM143-211ENST00000600816 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
TMEM143-211ENST00000600816 CHGAP10645 457 aaKnown RBP24.41■■□□□ 1.5
TMEM143-211ENST00000600816 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
TMEM143-211ENST00000600816 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
TMEM143-211ENST00000600816 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
TMEM143-211ENST00000600816 CPS1P31327 1500 aa24.38■■□□□ 1.49
TMEM143-211ENST00000600816 SLC26A8Q96RN1 970 aa24.36■■□□□ 1.49
TMEM143-211ENST00000600816 ZFYVE9O95405 1425 aa24.35■■□□□ 1.49
TMEM143-211ENST00000600816 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
TMEM143-211ENST00000600816 UBAP1LF5GYI3 381 aa24.35■■□□□ 1.49
TMEM143-211ENST00000600816 RIMS2Q9UQ26 1411 aa24.35■■□□□ 1.49
TMEM143-211ENST00000600816 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
TMEM143-211ENST00000600816 BCANQ96GW7 911 aa24.31■■□□□ 1.48
TMEM143-211ENST00000600816 STRCP1A6NGW2 1772 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms