RNA–Protein interactions for RNA: ENST00000600667.2

PDE4C-216, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-216ENST00000600667 RSPH4AQ5TD94 716 aa24.57■■□□□ 1.52
PDE4C-216ENST00000600667 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
PDE4C-216ENST00000600667 EHBP1L1Q8N3D4 1523 aa24.56■■□□□ 1.52
PDE4C-216ENST00000600667 WASHC2CQ9Y4E1 1318 aa24.55■■□□□ 1.52
PDE4C-216ENST00000600667 TOM1O60784 492 aa24.53■■□□□ 1.52
PDE4C-216ENST00000600667 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
PDE4C-216ENST00000600667 PZPP20742 1482 aa24.51■■□□□ 1.51
PDE4C-216ENST00000600667 HSPA1LP34931 641 aa24.51■■□□□ 1.51
PDE4C-216ENST00000600667 PIP4K2BP78356 416 aa24.51■■□□□ 1.51
PDE4C-216ENST00000600667 THEMISQ8N1K5 641 aaPredicted RBP24.51■■□□□ 1.51
PDE4C-216ENST00000600667 SCAF1Q9H7N4 1312 aaKnown RBP24.51■■□□□ 1.51
PDE4C-216ENST00000600667 CCDC141Q6ZP82 1450 aa24.51■■□□□ 1.51
PDE4C-216ENST00000600667 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
PDE4C-216ENST00000600667 CPS1P31327 1500 aa24.48■■□□□ 1.51
PDE4C-216ENST00000600667 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
PDE4C-216ENST00000600667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.51
PDE4C-216ENST00000600667 KDM5DQ9BY66 1539 aa24.47■■□□□ 1.51
PDE4C-216ENST00000600667 FAM135AQ9P2D6 1515 aa24.47■■□□□ 1.51
PDE4C-216ENST00000600667 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
PDE4C-216ENST00000600667 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
PDE4C-216ENST00000600667 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
PDE4C-216ENST00000600667 NEURL4Q96JN8 1562 aa24.46■■□□□ 1.51
PDE4C-216ENST00000600667 CAMSAP2Q08AD1 1489 aa24.45■■□□□ 1.5
PDE4C-216ENST00000600667 NLRP1Q9C000 1473 aa24.43■■□□□ 1.5
PDE4C-216ENST00000600667 MED14O60244 1454 aa24.39■■□□□ 1.5
PDE4C-216ENST00000600667 POLR1AO95602 1720 aaPredicted RBP24.39■■□□□ 1.5
PDE4C-216ENST00000600667 UGGT1Q9NYU2 1555 aa24.39■■□□□ 1.5
PDE4C-216ENST00000600667 NPHP4O75161 1426 aaPredicted RBP24.39■■□□□ 1.5
PDE4C-216ENST00000600667 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
PDE4C-216ENST00000600667 ARHGEF5Q12774 1597 aa24.36■■□□□ 1.49
PDE4C-216ENST00000600667 MED1Q15648 1581 aaPredicted RBP24.33■■□□□ 1.48
PDE4C-216ENST00000600667 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
PDE4C-216ENST00000600667 ABCC3O15438 1527 aa24.29■■□□□ 1.48
PDE4C-216ENST00000600667 ALKQ9UM73 1620 aa24.27■■□□□ 1.48
PDE4C-216ENST00000600667 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
PDE4C-216ENST00000600667 ERVK-7P63135 1459 aa24.26■■□□□ 1.47
PDE4C-216ENST00000600667 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
PDE4C-216ENST00000600667 LRRC7Q96NW7 1537 aa24.25■■□□□ 1.47
PDE4C-216ENST00000600667 RNF17Q9BXT8 1623 aaKnown RBP24.25■■□□□ 1.47
PDE4C-216ENST00000600667 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
PDE4C-216ENST00000600667 MAST1Q9Y2H9 1570 aa24.23■■□□□ 1.47
PDE4C-216ENST00000600667 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
PDE4C-216ENST00000600667 LTKP29376 864 aa24.2■■□□□ 1.46
PDE4C-216ENST00000600667 TXNDC2Q86VQ3 553 aa24.2■■□□□ 1.46
PDE4C-216ENST00000600667 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
PDE4C-216ENST00000600667 ZC3H13Q5T200 1668 aaKnown RBP24.2■■□□□ 1.46
PDE4C-216ENST00000600667 VPS8Q8N3P4 1428 aa24.19■■□□□ 1.46
PDE4C-216ENST00000600667 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
PDE4C-216ENST00000600667 EIF2AK4Q9P2K8 1649 aaKnown RBP24.17■■□□□ 1.46
PDE4C-216ENST00000600667 STRCP1A6NGW2 1772 aa24.17■■□□□ 1.46
PDE4C-216ENST00000600667 SCAF11Q99590 1463 aaKnown RBP24.17■■□□□ 1.46
PDE4C-216ENST00000600667 MROH1Q8NDA8 1641 aa24.16■■□□□ 1.46
PDE4C-216ENST00000600667 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
PDE4C-216ENST00000600667 EID1Q9Y6B2 187 aa24.14■■□□□ 1.45
PDE4C-216ENST00000600667 SYNMO15061 1565 aa24.13■■□□□ 1.45
PDE4C-216ENST00000600667 ARHGAP31Q2M1Z3 1444 aa24.13■■□□□ 1.45
PDE4C-216ENST00000600667 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
PDE4C-216ENST00000600667 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
PDE4C-216ENST00000600667 SLIT1O75093 1534 aa24.11■■□□□ 1.45
PDE4C-216ENST00000600667 MAP3K1Q13233 1512 aa24.11■■□□□ 1.45
PDE4C-216ENST00000600667 UBR1Q8IWV7 1749 aa24.11■■□□□ 1.45
PDE4C-216ENST00000600667 RRP7BPQ9NSQ0 103 aa24.11■■□□□ 1.45
PDE4C-216ENST00000600667 KIF15Q9NS87 1388 aa24.11■■□□□ 1.45
PDE4C-216ENST00000600667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.09■■□□□ 1.45
PDE4C-216ENST00000600667 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.45
PDE4C-216ENST00000600667 CEP152O94986 1710 aa24.07■■□□□ 1.44
PDE4C-216ENST00000600667 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
PDE4C-216ENST00000600667 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
PDE4C-216ENST00000600667 RGS17Q9UGC6 210 aaPredicted RBP24.06■■□□□ 1.44
PDE4C-216ENST00000600667 ABCC5O15440 1437 aa24.06■■□□□ 1.44
PDE4C-216ENST00000600667 ERBINQ96RT1 1412 aa24.06■■□□□ 1.44
PDE4C-216ENST00000600667 PRDM15P57071 1507 aaPredicted RBP24.04■■□□□ 1.44
PDE4C-216ENST00000600667 IDI1Q13907 227 aa24.03■■□□□ 1.44
PDE4C-216ENST00000600667 KANK1Q14678 1352 aa24.03■■□□□ 1.44
PDE4C-216ENST00000600667 FAM135BQ49AJ0 1406 aa24.02■■□□□ 1.44
PDE4C-216ENST00000600667 KCNA6P17658 529 aa24.01■■□□□ 1.43
PDE4C-216ENST00000600667 TMEM94Q12767 1356 aa23.99■■□□□ 1.43
PDE4C-216ENST00000600667 SLC26A8Q96RN1 970 aa23.97■■□□□ 1.43
PDE4C-216ENST00000600667 PIK3C2BO00750 1634 aa23.96■■□□□ 1.43
PDE4C-216ENST00000600667 DAPK1P53355 1430 aa23.96■■□□□ 1.43
PDE4C-216ENST00000600667 APLP2Q06481 763 aa23.96■■□□□ 1.43
PDE4C-216ENST00000600667 PROSER2Q86WR7 435 aaPredicted RBP23.96■■□□□ 1.43
PDE4C-216ENST00000600667 CHIC2Q9UKJ5 165 aa23.95■■□□□ 1.42
PDE4C-216ENST00000600667 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
PDE4C-216ENST00000600667 XIRP1Q702N8 1843 aaKnown RBP23.94■■□□□ 1.42
PDE4C-216ENST00000600667 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
PDE4C-216ENST00000600667 LMTK2Q8IWU2 1503 aa23.93■■□□□ 1.42
PDE4C-216ENST00000600667 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
PDE4C-216ENST00000600667 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
PDE4C-216ENST00000600667 SLC52A1Q9NWF4 448 aa23.92■■□□□ 1.42
PDE4C-216ENST00000600667 TET3O43151 1660 aa23.9■■□□□ 1.42
PDE4C-216ENST00000600667 POTEAQ6S8J7 498 aa23.9■■□□□ 1.42
PDE4C-216ENST00000600667 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
PDE4C-216ENST00000600667 NOS1P29475 1434 aa23.89■■□□□ 1.41
PDE4C-216ENST00000600667 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.41
PDE4C-216ENST00000600667 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.41
PDE4C-216ENST00000600667 BCANQ96GW7 911 aa23.88■■□□□ 1.41
PDE4C-216ENST00000600667 SLAIN2Q9P270 581 aa23.84■■□□□ 1.41
PDE4C-216ENST00000600667 MSH6P52701 1360 aa23.83■■□□□ 1.41
PDE4C-216ENST00000600667 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms