RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
FKRP-220ENST00000600646 ERBINQ96RT1 1412 aa11.66□□□□□ -0.54
FKRP-220ENST00000600646 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
FKRP-220ENST00000600646 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
FKRP-220ENST00000600646 NCOA1Q15788 1441 aa11.65□□□□□ -0.54
FKRP-220ENST00000600646 KANK1Q14678 1352 aa11.65□□□□□ -0.55
FKRP-220ENST00000600646 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
FKRP-220ENST00000600646 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
FKRP-220ENST00000600646 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
FKRP-220ENST00000600646 ROCK1Q13464 1354 aa11.63□□□□□ -0.55
FKRP-220ENST00000600646 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
FKRP-220ENST00000600646 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
FKRP-220ENST00000600646 KDM5DQ9BY66 1539 aa11.61□□□□□ -0.55
FKRP-220ENST00000600646 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
FKRP-220ENST00000600646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
FKRP-220ENST00000600646 ANKRD50Q9ULJ7 1429 aa11.6□□□□□ -0.55
FKRP-220ENST00000600646 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
FKRP-220ENST00000600646 C3P01024 1663 aa11.6□□□□□ -0.55
FKRP-220ENST00000600646 ZC3H13Q5T200 1668 aaKnown RBP11.6□□□□□ -0.55
FKRP-220ENST00000600646 NPATQ14207 1427 aa11.58□□□□□ -0.56
FKRP-220ENST00000600646 UHRF1BP1Q6BDS2 1440 aa11.58□□□□□ -0.56
FKRP-220ENST00000600646 PREX1Q8TCU6 1659 aa11.57□□□□□ -0.56
FKRP-220ENST00000600646 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
FKRP-220ENST00000600646 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
FKRP-220ENST00000600646 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
FKRP-220ENST00000600646 PRDM15P57071 1507 aaPredicted RBP11.55□□□□□ -0.56
FKRP-220ENST00000600646 DEPDC5O75140 1603 aa11.55□□□□□ -0.56
FKRP-220ENST00000600646 PZPP20742 1482 aa11.54□□□□□ -0.56
FKRP-220ENST00000600646 ABCC3O15438 1527 aa11.54□□□□□ -0.56
FKRP-220ENST00000600646 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
FKRP-220ENST00000600646 CEP152O94986 1710 aa11.52□□□□□ -0.56
FKRP-220ENST00000600646 MROH1Q8NDA8 1641 aa11.52□□□□□ -0.57
FKRP-220ENST00000600646 TNRQ92752 1358 aa11.52□□□□□ -0.57
FKRP-220ENST00000600646 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
FKRP-220ENST00000600646 NUP155O75694 1391 aa11.51□□□□□ -0.57
FKRP-220ENST00000600646 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
FKRP-220ENST00000600646 ARHGAP31Q2M1Z3 1444 aa11.51□□□□□ -0.57
FKRP-220ENST00000600646 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
FKRP-220ENST00000600646 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
FKRP-220ENST00000600646 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
FKRP-220ENST00000600646 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
FKRP-220ENST00000600646 UNC13BO14795 1591 aa11.5□□□□□ -0.57
FKRP-220ENST00000600646 TRIM52Q96A61 297 aa11.49□□□□□ -0.57
FKRP-220ENST00000600646 NAIPQ13075 1403 aa11.49□□□□□ -0.57
FKRP-220ENST00000600646 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
FKRP-220ENST00000600646 HSPA2P54652 639 aa11.48□□□□□ -0.57
FKRP-220ENST00000600646 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
FKRP-220ENST00000600646 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
FKRP-220ENST00000600646 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
FKRP-220ENST00000600646 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
FKRP-220ENST00000600646 MYO3AQ8NEV4 1616 aa11.48□□□□□ -0.57
FKRP-220ENST00000600646 TET3O43151 1660 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 CEP170BQ9Y4F5 1589 aaPredicted RBP11.46□□□□□ -0.57
FKRP-220ENST00000600646 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 ERVK-7P63135 1459 aa11.46□□□□□ -0.57
FKRP-220ENST00000600646 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
FKRP-220ENST00000600646 SLC52A1Q9NWF4 448 aa11.45□□□□□ -0.58
FKRP-220ENST00000600646 UGGT1Q9NYU2 1555 aa11.44□□□□□ -0.58
FKRP-220ENST00000600646 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
FKRP-220ENST00000600646 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
FKRP-220ENST00000600646 PKD2Q13563 968 aa11.43□□□□□ -0.58
FKRP-220ENST00000600646 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
FKRP-220ENST00000600646 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
FKRP-220ENST00000600646 ANKLE2Q86XL3 938 aa11.42□□□□□ -0.58
FKRP-220ENST00000600646 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
FKRP-220ENST00000600646 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
FKRP-220ENST00000600646 NOS1P29475 1434 aa11.4□□□□□ -0.58
FKRP-220ENST00000600646 E9PCH4 1651 aa11.4□□□□□ -0.59
FKRP-220ENST00000600646 IDI1Q13907 227 aa11.39□□□□□ -0.59
FKRP-220ENST00000600646 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
FKRP-220ENST00000600646 HRCP23327 699 aa11.38□□□□□ -0.59
FKRP-220ENST00000600646 KDM5AP29375 1690 aaKnown RBP11.38□□□□□ -0.59
FKRP-220ENST00000600646 PTPRTO14522 1441 aa11.37□□□□□ -0.59
FKRP-220ENST00000600646 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
FKRP-220ENST00000600646 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 PIK3C2BO00750 1634 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 UBR1Q8IWV7 1749 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
FKRP-220ENST00000600646 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 SYNMO15061 1565 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
FKRP-220ENST00000600646 POLR1AO95602 1720 aaPredicted RBP11.35□□□□□ -0.59
FKRP-220ENST00000600646 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
FKRP-220ENST00000600646 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
FKRP-220ENST00000600646 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
FKRP-220ENST00000600646 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
FKRP-220ENST00000600646 BCANQ96GW7 911 aa11.34□□□□□ -0.59
FKRP-220ENST00000600646 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
FKRP-220ENST00000600646 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.6
FKRP-220ENST00000600646 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
FKRP-220ENST00000600646 SLIT1O75093 1534 aa11.32□□□□□ -0.6
FKRP-220ENST00000600646 TRPM2O94759 1503 aa11.31□□□□□ -0.6
FKRP-220ENST00000600646 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
FKRP-220ENST00000600646 MED14O60244 1454 aa11.31□□□□□ -0.6
FKRP-220ENST00000600646 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
FKRP-220ENST00000600646 CCDC144AA2RUR9 1427 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms