RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
TGFB1-204ENST00000600196 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
TGFB1-204ENST00000600196 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
TGFB1-204ENST00000600196 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
TGFB1-204ENST00000600196 DEPDC5O75140 1603 aa18.26■□□□□ 0.51
TGFB1-204ENST00000600196 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
TGFB1-204ENST00000600196 GGT6Q6P531 493 aa18.25■□□□□ 0.51
TGFB1-204ENST00000600196 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
TGFB1-204ENST00000600196 UNC13BO14795 1591 aa18.23■□□□□ 0.51
TGFB1-204ENST00000600196 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
TGFB1-204ENST00000600196 ESF1Q9H501 851 aaKnown RBP18.23■□□□□ 0.51
TGFB1-204ENST00000600196 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
TGFB1-204ENST00000600196 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
TGFB1-204ENST00000600196 NUP155O75694 1391 aa18.22■□□□□ 0.51
TGFB1-204ENST00000600196 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
TGFB1-204ENST00000600196 MROH1Q8NDA8 1641 aa18.19■□□□□ 0.5
TGFB1-204ENST00000600196 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
TGFB1-204ENST00000600196 TRIM52Q96A61 297 aa18.18■□□□□ 0.5
TGFB1-204ENST00000600196 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
TGFB1-204ENST00000600196 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
TGFB1-204ENST00000600196 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
TGFB1-204ENST00000600196 RPRD2Q5VT52 1461 aaKnown RBP18.16■□□□□ 0.5
TGFB1-204ENST00000600196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.5
TGFB1-204ENST00000600196 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
TGFB1-204ENST00000600196 ABCC3O15438 1527 aa18.14■□□□□ 0.49
TGFB1-204ENST00000600196 MLECQ14165 292 aa18.14■□□□□ 0.49
TGFB1-204ENST00000600196 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
TGFB1-204ENST00000600196 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
TGFB1-204ENST00000600196 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
TGFB1-204ENST00000600196 TET3O43151 1660 aa18.11■□□□□ 0.49
TGFB1-204ENST00000600196 PZPP20742 1482 aa18.1■□□□□ 0.49
TGFB1-204ENST00000600196 NPATQ14207 1427 aa18.09■□□□□ 0.49
TGFB1-204ENST00000600196 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.48
TGFB1-204ENST00000600196 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
TGFB1-204ENST00000600196 PKD2Q13563 968 aa18.07■□□□□ 0.48
TGFB1-204ENST00000600196 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
TGFB1-204ENST00000600196 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
TGFB1-204ENST00000600196 PTPRTO14522 1441 aa18.06■□□□□ 0.48
TGFB1-204ENST00000600196 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
TGFB1-204ENST00000600196 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
TGFB1-204ENST00000600196 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
TGFB1-204ENST00000600196 NOS1P29475 1434 aa18.04■□□□□ 0.48
TGFB1-204ENST00000600196 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
TGFB1-204ENST00000600196 PTPRMP28827 1452 aa18.03■□□□□ 0.48
TGFB1-204ENST00000600196 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.48
TGFB1-204ENST00000600196 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
TGFB1-204ENST00000600196 CEP152O94986 1710 aa18.01■□□□□ 0.47
TGFB1-204ENST00000600196 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
TGFB1-204ENST00000600196 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
TGFB1-204ENST00000600196 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
TGFB1-204ENST00000600196 E9PCH4 1651 aa17.98■□□□□ 0.47
TGFB1-204ENST00000600196 RIMS1Q86UR5 1692 aaKnown RBP17.97■□□□□ 0.47
TGFB1-204ENST00000600196 NLRP1Q9C000 1473 aa17.97■□□□□ 0.47
TGFB1-204ENST00000600196 C3P01024 1663 aa17.96■□□□□ 0.47
TGFB1-204ENST00000600196 TNRQ92752 1358 aa17.96■□□□□ 0.47
TGFB1-204ENST00000600196 FBXO31Q5XUX0 539 aaPredicted RBP17.95■□□□□ 0.46
TGFB1-204ENST00000600196 TRPM2O94759 1503 aa17.94■□□□□ 0.46
TGFB1-204ENST00000600196 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
TGFB1-204ENST00000600196 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
TGFB1-204ENST00000600196 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
TGFB1-204ENST00000600196 STAC3Q96MF2 364 aa17.93■□□□□ 0.46
TGFB1-204ENST00000600196 NEURL4Q96JN8 1562 aa17.92■□□□□ 0.46
TGFB1-204ENST00000600196 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
TGFB1-204ENST00000600196 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
TGFB1-204ENST00000600196 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
TGFB1-204ENST00000600196 IDI1Q13907 227 aa17.9■□□□□ 0.46
TGFB1-204ENST00000600196 KDM5AP29375 1690 aaKnown RBP17.89■□□□□ 0.45
TGFB1-204ENST00000600196 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
TGFB1-204ENST00000600196 HDGFP51858 240 aaKnown RBP17.88■□□□□ 0.45
TGFB1-204ENST00000600196 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
TGFB1-204ENST00000600196 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
TGFB1-204ENST00000600196 SYNMO15061 1565 aa17.87■□□□□ 0.45
TGFB1-204ENST00000600196 FOXD1Q16676 465 aa17.87■□□□□ 0.45
TGFB1-204ENST00000600196 CCER1Q8TC90 406 aaPredicted RBP17.87■□□□□ 0.45
TGFB1-204ENST00000600196 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
TGFB1-204ENST00000600196 A2ML1A8K2U0 1454 aa17.87■□□□□ 0.45
TGFB1-204ENST00000600196 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
TGFB1-204ENST00000600196 STAG3Q9UJ98 1225 aa17.83■□□□□ 0.44
TGFB1-204ENST00000600196 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
TGFB1-204ENST00000600196 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
TGFB1-204ENST00000600196 UGGT1Q9NYU2 1555 aa17.8■□□□□ 0.44
TGFB1-204ENST00000600196 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
TGFB1-204ENST00000600196 CLTCL1P53675 1640 aa17.8■□□□□ 0.44
TGFB1-204ENST00000600196 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
TGFB1-204ENST00000600196 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
TGFB1-204ENST00000600196 CEP170BQ9Y4F5 1589 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-204ENST00000600196 KIF1BO60333 1816 aa17.78■□□□□ 0.44
TGFB1-204ENST00000600196 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
TGFB1-204ENST00000600196 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
TGFB1-204ENST00000600196 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.44
TGFB1-204ENST00000600196 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.43
TGFB1-204ENST00000600196 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
TGFB1-204ENST00000600196 SLIT1O75093 1534 aa17.76■□□□□ 0.43
TGFB1-204ENST00000600196 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
TGFB1-204ENST00000600196 EID1Q9Y6B2 187 aa17.75■□□□□ 0.43
TGFB1-204ENST00000600196 CHGAP10645 457 aaKnown RBP17.74■□□□□ 0.43
TGFB1-204ENST00000600196 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
TGFB1-204ENST00000600196 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
TGFB1-204ENST00000600196 SIN3AQ96ST3 1273 aa17.74■□□□□ 0.43
TGFB1-204ENST00000600196 UBR1Q8IWV7 1749 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms