RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 SPAG9O60271 1321 aaKnown RBP29.59■■■□□ 2.33
RAB4B-206ENST00000600078 POLR1AO95602 1720 aaPredicted RBP29.57■■■□□ 2.32
RAB4B-206ENST00000600078 A2MP01023 1474 aa29.57■■■□□ 2.32
RAB4B-206ENST00000600078 SCAF1Q9H7N4 1312 aaKnown RBP29.57■■■□□ 2.32
RAB4B-206ENST00000600078 DNMT1P26358 1616 aaKnown RBP29.56■■■□□ 2.32
RAB4B-206ENST00000600078 MIA2Q96PC5 1412 aa29.56■■■□□ 2.32
RAB4B-206ENST00000600078 CPS1P31327 1500 aa29.55■■■□□ 2.32
RAB4B-206ENST00000600078 A2ML1A8K2U0 1454 aa29.55■■■□□ 2.32
RAB4B-206ENST00000600078 PIP4K2BP78356 416 aa29.54■■■□□ 2.32
RAB4B-206ENST00000600078 CAMSAP2Q08AD1 1489 aa29.54■■■□□ 2.32
RAB4B-206ENST00000600078 NEURL4Q96JN8 1562 aa29.53■■■□□ 2.32
RAB4B-206ENST00000600078 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
RAB4B-206ENST00000600078 MBD5Q9P267 1494 aa29.49■■■□□ 2.31
RAB4B-206ENST00000600078 TOM1O60784 492 aa29.49■■■□□ 2.31
RAB4B-206ENST00000600078 ADGBQ8N7X0 1667 aa29.49■■■□□ 2.31
RAB4B-206ENST00000600078 GGT6Q6P531 493 aa29.48■■■□□ 2.31
RAB4B-206ENST00000600078 SHANK2Q9UPX8 1470 aa29.48■■■□□ 2.31
RAB4B-206ENST00000600078 FGD6Q6ZV73 1430 aa29.46■■■□□ 2.31
RAB4B-206ENST00000600078 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
RAB4B-206ENST00000600078 ALKQ9UM73 1620 aa29.44■■■□□ 2.3
RAB4B-206ENST00000600078 PTPN23Q9H3S7 1636 aa29.42■■■□□ 2.3
RAB4B-206ENST00000600078 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
RAB4B-206ENST00000600078 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
RAB4B-206ENST00000600078 CCDC141Q6ZP82 1450 aa29.41■■■□□ 2.3
RAB4B-206ENST00000600078 ARHGEF5Q12774 1597 aa29.4■■■□□ 2.3
RAB4B-206ENST00000600078 TNRQ92752 1358 aa29.35■■■□□ 2.29
RAB4B-206ENST00000600078 TSPY4P0CV99 314 aa29.34■■■□□ 2.29
RAB4B-206ENST00000600078 TSPY10P0CW01 314 aa29.34■■■□□ 2.29
RAB4B-206ENST00000600078 RTEL1-TNFRSF6BF6WH68 1400 aa29.33■■■□□ 2.29
RAB4B-206ENST00000600078 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
RAB4B-206ENST00000600078 PZPP20742 1482 aa29.3■■■□□ 2.28
RAB4B-206ENST00000600078 DEPDC5O75140 1603 aa29.3■■■□□ 2.28
RAB4B-206ENST00000600078 FBXO31Q5XUX0 539 aaPredicted RBP29.29■■■□□ 2.28
RAB4B-206ENST00000600078 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
RAB4B-206ENST00000600078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.28■■■□□ 2.28
RAB4B-206ENST00000600078 MED14O60244 1454 aa29.28■■■□□ 2.28
RAB4B-206ENST00000600078 FAM135AQ9P2D6 1515 aa29.27■■■□□ 2.28
RAB4B-206ENST00000600078 ANKLE2Q86XL3 938 aa29.26■■■□□ 2.27
RAB4B-206ENST00000600078 ABCC5O15440 1437 aa29.26■■■□□ 2.27
RAB4B-206ENST00000600078 NPHP4O75161 1426 aaPredicted RBP29.26■■■□□ 2.27
RAB4B-206ENST00000600078 STRCP1A6NGW2 1772 aa29.26■■■□□ 2.27
RAB4B-206ENST00000600078 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
RAB4B-206ENST00000600078 RNF17Q9BXT8 1623 aaKnown RBP29.25■■■□□ 2.27
RAB4B-206ENST00000600078 DAPK1P53355 1430 aa29.24■■■□□ 2.27
RAB4B-206ENST00000600078 MAST1Q9Y2H9 1570 aa29.24■■■□□ 2.27
RAB4B-206ENST00000600078 DHX29Q7Z478 1369 aaKnown RBP29.24■■■□□ 2.27
RAB4B-206ENST00000600078 UGGT1Q9NYU2 1555 aa29.23■■■□□ 2.27
RAB4B-206ENST00000600078 SYNMO15061 1565 aa29.22■■■□□ 2.27
RAB4B-206ENST00000600078 NLRP1Q9C000 1473 aa29.22■■■□□ 2.27
RAB4B-206ENST00000600078 CROCC2H7BZ55 1655 aa29.2■■■□□ 2.26
RAB4B-206ENST00000600078 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.26
RAB4B-206ENST00000600078 THEMISQ8N1K5 641 aaPredicted RBP29.19■■■□□ 2.26
RAB4B-206ENST00000600078 SENP3Q9H4L4 574 aaPredicted RBP29.18■■■□□ 2.26
RAB4B-206ENST00000600078 KIF3BO15066 747 aa29.16■■■□□ 2.26
RAB4B-206ENST00000600078 RRBP1Q9P2E9 1410 aaKnown RBP29.15■■■□□ 2.26
RAB4B-206ENST00000600078 RGS17Q9UGC6 210 aaPredicted RBP29.12■■■□□ 2.25
RAB4B-206ENST00000600078 CHIC2Q9UKJ5 165 aa29.12■■■□□ 2.25
RAB4B-206ENST00000600078 WASHC2CQ9Y4E1 1318 aa29.11■■■□□ 2.25
RAB4B-206ENST00000600078 ZC3H13Q5T200 1668 aaKnown RBP29.09■■■□□ 2.25
RAB4B-206ENST00000600078 ANKRD30AQ9BXX3 1397 aa29.08■■■□□ 2.25
RAB4B-206ENST00000600078 RRP7BPQ9NSQ0 103 aa29.07■■■□□ 2.24
RAB4B-206ENST00000600078 KIF15Q9NS87 1388 aa29.05■■■□□ 2.24
RAB4B-206ENST00000600078 ITGAEP38570 1179 aa29.05■■■□□ 2.24
RAB4B-206ENST00000600078 DUOX2Q9NRD8 1548 aa29.04■■■□□ 2.24
RAB4B-206ENST00000600078 ADGRL2O95490 1459 aa29.04■■■□□ 2.24
RAB4B-206ENST00000600078 XIRP1Q702N8 1843 aaKnown RBP29.02■■■□□ 2.24
RAB4B-206ENST00000600078 UBR1Q8IWV7 1749 aa28.98■■■□□ 2.23
RAB4B-206ENST00000600078 ABCC3O15438 1527 aa28.98■■■□□ 2.23
RAB4B-206ENST00000600078 ERVK-7P63135 1459 aa28.97■■■□□ 2.23
RAB4B-206ENST00000600078 ROCK1Q13464 1354 aa28.96■■■□□ 2.23
RAB4B-206ENST00000600078 ERBINQ96RT1 1412 aa28.95■■■□□ 2.23
RAB4B-206ENST00000600078 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.23
RAB4B-206ENST00000600078 SCAF11Q99590 1463 aaKnown RBP28.93■■■□□ 2.22
RAB4B-206ENST00000600078 POTEAQ6S8J7 498 aa28.91■■■□□ 2.22
RAB4B-206ENST00000600078 CEP152O94986 1710 aa28.88■■■□□ 2.21
RAB4B-206ENST00000600078 MROH1Q8NDA8 1641 aa28.87■■■□□ 2.21
RAB4B-206ENST00000600078 FAM135BQ49AJ0 1406 aa28.87■■■□□ 2.21
RAB4B-206ENST00000600078 ARHGAP23Q9P227 1491 aa28.87■■■□□ 2.21
RAB4B-206ENST00000600078 SETD1AO15047 1707 aaKnown RBP28.87■■■□□ 2.21
RAB4B-206ENST00000600078 ANKRD50Q9ULJ7 1429 aa28.86■■■□□ 2.21
RAB4B-206ENST00000600078 SLIT1O75093 1534 aa28.86■■■□□ 2.21
RAB4B-206ENST00000600078 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
RAB4B-206ENST00000600078 LTKP29376 864 aa28.82■■■□□ 2.2
RAB4B-206ENST00000600078 ROBO1Q9Y6N7 1651 aa28.82■■■□□ 2.2
RAB4B-206ENST00000600078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.2
RAB4B-206ENST00000600078 TXNDC2Q86VQ3 553 aa28.77■■■□□ 2.2
RAB4B-206ENST00000600078 PRDM15P57071 1507 aaPredicted RBP28.76■■■□□ 2.19
RAB4B-206ENST00000600078 KANK1Q14678 1352 aa28.75■■■□□ 2.19
RAB4B-206ENST00000600078 TMEM94Q12767 1356 aa28.73■■■□□ 2.19
RAB4B-206ENST00000600078 NAIPQ13075 1403 aa28.72■■■□□ 2.19
RAB4B-206ENST00000600078 PIK3C2BO00750 1634 aa28.72■■■□□ 2.19
RAB4B-206ENST00000600078 HFM1A2PYH4 1435 aa28.7■■■□□ 2.19
RAB4B-206ENST00000600078 EID1Q9Y6B2 187 aa28.69■■■□□ 2.18
RAB4B-206ENST00000600078 GCC2Q8IWJ2 1684 aa28.69■■■□□ 2.18
RAB4B-206ENST00000600078 ARHGAP31Q2M1Z3 1444 aa28.68■■■□□ 2.18
RAB4B-206ENST00000600078 TMEM2Q9UHN6 1383 aa28.66■■■□□ 2.18
RAB4B-206ENST00000600078 UNC13BO14795 1591 aa28.66■■■□□ 2.18
RAB4B-206ENST00000600078 PHLPP1O60346 1717 aa28.66■■■□□ 2.18
RAB4B-206ENST00000600078 KDM5AP29375 1690 aaKnown RBP28.64■■■□□ 2.17
RAB4B-206ENST00000600078 LMTK2Q8IWU2 1503 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms