RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
CALM3-212ENST00000599839 ROCK1Q13464 1354 aa24.02■■□□□ 1.43
CALM3-212ENST00000599839 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
CALM3-212ENST00000599839 GGT6Q6P531 493 aa24■■□□□ 1.43
CALM3-212ENST00000599839 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
CALM3-212ENST00000599839 CEP152O94986 1710 aa23.99■■□□□ 1.43
CALM3-212ENST00000599839 PRDM15P57071 1507 aaPredicted RBP23.98■■□□□ 1.43
CALM3-212ENST00000599839 KDM5DQ9BY66 1539 aa23.96■■□□□ 1.43
CALM3-212ENST00000599839 ANKRD50Q9ULJ7 1429 aa23.96■■□□□ 1.43
CALM3-212ENST00000599839 ZC3H13Q5T200 1668 aaKnown RBP23.95■■□□□ 1.42
CALM3-212ENST00000599839 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CALM3-212ENST00000599839 ABCC3O15438 1527 aa23.93■■□□□ 1.42
CALM3-212ENST00000599839 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
CALM3-212ENST00000599839 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
CALM3-212ENST00000599839 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
CALM3-212ENST00000599839 UNC13BO14795 1591 aa23.92■■□□□ 1.42
CALM3-212ENST00000599839 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
CALM3-212ENST00000599839 CEBPAP49715 358 aaPredicted RBP23.91■■□□□ 1.42
CALM3-212ENST00000599839 NAIPQ13075 1403 aa23.89■■□□□ 1.42
CALM3-212ENST00000599839 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.42
CALM3-212ENST00000599839 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
CALM3-212ENST00000599839 ZMYM3Q14202 1370 aa23.86■■□□□ 1.41
CALM3-212ENST00000599839 HFM1A2PYH4 1435 aa23.85■■□□□ 1.41
CALM3-212ENST00000599839 PPP6R1Q9UPN7 881 aa23.85■■□□□ 1.41
CALM3-212ENST00000599839 WASHC2CQ9Y4E1 1318 aa23.83■■□□□ 1.41
CALM3-212ENST00000599839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.83■■□□□ 1.414e-7■■□□□ 13.6
CALM3-212ENST00000599839 PREX1Q8TCU6 1659 aa23.82■■□□□ 1.4
CALM3-212ENST00000599839 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
CALM3-212ENST00000599839 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
CALM3-212ENST00000599839 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
CALM3-212ENST00000599839 PZPP20742 1482 aa23.8■■□□□ 1.4
CALM3-212ENST00000599839 MYO3AQ8NEV4 1616 aa23.78■■□□□ 1.4
CALM3-212ENST00000599839 TET3O43151 1660 aa23.77■■□□□ 1.4
CALM3-212ENST00000599839 EFCAB6Q5THR3 1501 aa23.77■■□□□ 1.4
CALM3-212ENST00000599839 LMTK3Q96Q04 1460 aa23.77■■□□□ 1.4
CALM3-212ENST00000599839 KANK1Q14678 1352 aa23.76■■□□□ 1.39
CALM3-212ENST00000599839 NPATQ14207 1427 aa23.75■■□□□ 1.39
CALM3-212ENST00000599839 SETD1BQ9UPS6 1966 aaKnown RBP23.75■■□□□ 1.39
CALM3-212ENST00000599839 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
CALM3-212ENST00000599839 E9PCH4 1651 aa23.73■■□□□ 1.39
CALM3-212ENST00000599839 FBXO31Q5XUX0 539 aaPredicted RBP23.73■■□□□ 1.39
CALM3-212ENST00000599839 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
CALM3-212ENST00000599839 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
CALM3-212ENST00000599839 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.39
CALM3-212ENST00000599839 NUP155O75694 1391 aa23.69■■□□□ 1.38
CALM3-212ENST00000599839 UHRF1BP1Q6BDS2 1440 aa23.66■■□□□ 1.38
CALM3-212ENST00000599839 SYNMO15061 1565 aa23.66■■□□□ 1.38
CALM3-212ENST00000599839 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
CALM3-212ENST00000599839 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
CALM3-212ENST00000599839 TNRQ92752 1358 aa23.65■■□□□ 1.38
CALM3-212ENST00000599839 RPRD2Q5VT52 1461 aaKnown RBP23.62■■□□□ 1.37
CALM3-212ENST00000599839 RAB3GAP2Q9H2M9 1393 aa23.62■■□□□ 1.37
CALM3-212ENST00000599839 NOS1P29475 1434 aa23.6■■□□□ 1.37
CALM3-212ENST00000599839 HSPA2P54652 639 aa23.6■■□□□ 1.37
CALM3-212ENST00000599839 SPHKAPQ2M3C7 1700 aa23.59■■□□□ 1.37
CALM3-212ENST00000599839 PIK3C2BO00750 1634 aa23.58■■□□□ 1.37
CALM3-212ENST00000599839 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
CALM3-212ENST00000599839 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
CALM3-212ENST00000599839 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
CALM3-212ENST00000599839 NLRP1Q9C000 1473 aa23.57■■□□□ 1.36
CALM3-212ENST00000599839 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
CALM3-212ENST00000599839 STRCQ7RTU9 1775 aa23.55■■□□□ 1.36
CALM3-212ENST00000599839 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
CALM3-212ENST00000599839 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
CALM3-212ENST00000599839 SLC4A1APQ9BWU0 796 aaKnown RBP23.48■■□□□ 1.35
CALM3-212ENST00000599839 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
CALM3-212ENST00000599839 KDM5AP29375 1690 aaKnown RBP23.47■■□□□ 1.35
CALM3-212ENST00000599839 POLR1AO95602 1720 aaPredicted RBP23.47■■□□□ 1.35
CALM3-212ENST00000599839 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
CALM3-212ENST00000599839 TRPM2O94759 1503 aa23.47■■□□□ 1.35
CALM3-212ENST00000599839 PTPRTO14522 1441 aa23.46■■□□□ 1.35
CALM3-212ENST00000599839 PLA2R1Q13018 1463 aa23.46■■□□□ 1.35
CALM3-212ENST00000599839 PKD2Q13563 968 aa23.46■■□□□ 1.35
CALM3-212ENST00000599839 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
CALM3-212ENST00000599839 IDI1Q13907 227 aa23.44■■□□□ 1.34
CALM3-212ENST00000599839 FOXD1Q16676 465 aa23.44■■□□□ 1.34
CALM3-212ENST00000599839 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
CALM3-212ENST00000599839 NEURL4Q96JN8 1562 aa23.41■■□□□ 1.34
CALM3-212ENST00000599839 HRCP23327 699 aa23.39■■□□□ 1.33
CALM3-212ENST00000599839 SLC52A1Q9NWF4 448 aa23.38■■□□□ 1.33
CALM3-212ENST00000599839 SLIT1O75093 1534 aa23.37■■□□□ 1.33
CALM3-212ENST00000599839 KIF1BO60333 1816 aa23.37■■□□□ 1.33
CALM3-212ENST00000599839 ARHGAP23Q9P227 1491 aa23.37■■□□□ 1.33
CALM3-212ENST00000599839 NCKAP5LQ9HCH0 1330 aa23.35■■□□□ 1.33
CALM3-212ENST00000599839 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
CALM3-212ENST00000599839 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
CALM3-212ENST00000599839 STAG3Q9UJ98 1225 aa23.31■■□□□ 1.32
CALM3-212ENST00000599839 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
CALM3-212ENST00000599839 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
CALM3-212ENST00000599839 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
CALM3-212ENST00000599839 ZFYVE9O95405 1425 aa23.29■■□□□ 1.32
CALM3-212ENST00000599839 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
CALM3-212ENST00000599839 MED14O60244 1454 aa23.27■■□□□ 1.32
CALM3-212ENST00000599839 LTKP29376 864 aa23.27■■□□□ 1.31
CALM3-212ENST00000599839 CCDC144AA2RUR9 1427 aa23.26■■□□□ 1.31
CALM3-212ENST00000599839 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
CALM3-212ENST00000599839 NEXMIFQ5QGS0 1516 aa23.24■■□□□ 1.31
CALM3-212ENST00000599839 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
CALM3-212ENST00000599839 RIMS2Q9UQ26 1411 aa23.24■■□□□ 1.31
CALM3-212ENST00000599839 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms