RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 WASHC2CQ9Y4E1 1318 aa43.16■■■■■ 4.5
SSBP4-206ENST00000599699 EIF2AK4Q9P2K8 1649 aaKnown RBP43.13■■■■■ 4.49
SSBP4-206ENST00000599699 NCOA1Q15788 1441 aa43.13■■■■■ 4.49
SSBP4-206ENST00000599699 ERBINQ96RT1 1412 aa43.11■■■■■ 4.49
SSBP4-206ENST00000599699 KDM5DQ9BY66 1539 aa43.09■■■■■ 4.49
SSBP4-206ENST00000599699 ITGAEP38570 1179 aa43.09■■■■■ 4.49
SSBP4-206ENST00000599699 HSPA2P54652 639 aa43.08■■■■■ 4.49
SSBP4-206ENST00000599699 ADGRL2O95490 1459 aa43.07■■■■■ 4.49
SSBP4-206ENST00000599699 PREX1Q8TCU6 1659 aa43.07■■■■■ 4.49
SSBP4-206ENST00000599699 RNF17Q9BXT8 1623 aaKnown RBP43.07■■■■■ 4.48
SSBP4-206ENST00000599699 UHRF1BP1Q6BDS2 1440 aa43.06■■■■■ 4.48
SSBP4-206ENST00000599699 FAM135AQ9P2D6 1515 aa43.06■■■■■ 4.48
SSBP4-206ENST00000599699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.04■■■■■ 4.483e-9■□□□□ 11.1
SSBP4-206ENST00000599699 NPATQ14207 1427 aa43.04■■■■■ 4.48
SSBP4-206ENST00000599699 PTPRKQ15262 1439 aa43.03■■■■■ 4.48
SSBP4-206ENST00000599699 SETD1BQ9UPS6 1966 aaKnown RBP43.03■■■■■ 4.48
SSBP4-206ENST00000599699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.99■■■■■ 4.47
SSBP4-206ENST00000599699 RRBP1Q9P2E9 1410 aaKnown RBP42.97■■■■■ 4.47
SSBP4-206ENST00000599699 MROH1Q8NDA8 1641 aa42.94■■■■■ 4.46
SSBP4-206ENST00000599699 ABCC3O15438 1527 aa42.93■■■■■ 4.46
SSBP4-206ENST00000599699 ANKRD50Q9ULJ7 1429 aa42.9■■■■■ 4.46
SSBP4-206ENST00000599699 FBXO31Q5XUX0 539 aaPredicted RBP42.9■■■■■ 4.46
SSBP4-206ENST00000599699 ROCK1Q13464 1354 aa42.9■■■■■ 4.46
SSBP4-206ENST00000599699 KANK1Q14678 1352 aa42.9■■■■■ 4.46
SSBP4-206ENST00000599699 PZPP20742 1482 aa42.89■■■■■ 4.46
SSBP4-206ENST00000599699 ZC3H13Q5T200 1668 aaKnown RBP42.89■■■■■ 4.46
SSBP4-206ENST00000599699 PRDM15P57071 1507 aaPredicted RBP42.87■■■■■ 4.45
SSBP4-206ENST00000599699 DEPDC5O75140 1603 aa42.82■■■■■ 4.44
SSBP4-206ENST00000599699 TNRQ92752 1358 aa42.81■■■■■ 4.44
SSBP4-206ENST00000599699 CEP152O94986 1710 aa42.81■■■■■ 4.44
SSBP4-206ENST00000599699 MYO3AQ8NEV4 1616 aa42.78■■■■■ 4.44
SSBP4-206ENST00000599699 CAMSAP1Q5T5Y3 1602 aa42.75■■■■■ 4.43
SSBP4-206ENST00000599699 CEP170BQ9Y4F5 1589 aaPredicted RBP42.69■■■■■ 4.43
SSBP4-206ENST00000599699 VWDEQ8N2E2 1590 aa42.66■■■■■ 4.42
SSBP4-206ENST00000599699 ARHGAP31Q2M1Z3 1444 aa42.66■■■■■ 4.42
SSBP4-206ENST00000599699 A2ML1A8K2U0 1454 aa42.66■■■■■ 4.42
SSBP4-206ENST00000599699 ERVK-7P63135 1459 aa42.66■■■■■ 4.42
SSBP4-206ENST00000599699 ZNF142P52746 1687 aaPredicted RBP42.66■■■■■ 4.42
SSBP4-206ENST00000599699 LMTK2Q8IWU2 1503 aa42.64■■■■■ 4.42
SSBP4-206ENST00000599699 SPATA31D1Q6ZQQ2 1576 aa42.61■■■■■ 4.41
SSBP4-206ENST00000599699 NLRP1Q9C000 1473 aa42.6■■■■■ 4.41
SSBP4-206ENST00000599699 DMRT2Q9Y5R5 561 aa42.59■■■■■ 4.41
SSBP4-206ENST00000599699 CFAP65Q6ZU64 1925 aaKnown RBP42.58■■■■■ 4.41
SSBP4-206ENST00000599699 STRCQ7RTU9 1775 aa42.56■■■■■ 4.4
SSBP4-206ENST00000599699 UNC13BO14795 1591 aa42.56■■■■■ 4.4
SSBP4-206ENST00000599699 EFCAB6Q5THR3 1501 aa42.52■■■■■ 4.4
SSBP4-206ENST00000599699 NUP155O75694 1391 aa42.51■■■■■ 4.4
SSBP4-206ENST00000599699 NCKAP5LQ9HCH0 1330 aa42.5■■■■■ 4.39
SSBP4-206ENST00000599699 NAIPQ13075 1403 aa42.49■■■■■ 4.39
SSBP4-206ENST00000599699 THEMISQ8N1K5 641 aaPredicted RBP42.49■■■■■ 4.39
SSBP4-206ENST00000599699 PLA2R1Q13018 1463 aa42.48■■■■■ 4.39
SSBP4-206ENST00000599699 UGGT1Q9NYU2 1555 aa42.47■■■■■ 4.39
SSBP4-206ENST00000599699 PKD2Q13563 968 aa42.45■■■■■ 4.39
SSBP4-206ENST00000599699 TET3O43151 1660 aa42.43■■■■■ 4.38
SSBP4-206ENST00000599699 HFM1A2PYH4 1435 aa42.43■■■■■ 4.38
SSBP4-206ENST00000599699 PTPRTO14522 1441 aa42.41■■■■■ 4.38
SSBP4-206ENST00000599699 GCC2Q8IWJ2 1684 aa42.4■■■■■ 4.38
SSBP4-206ENST00000599699 IQGAP3Q86VI3 1631 aa42.39■■■■■ 4.38
SSBP4-206ENST00000599699 RPRD2Q5VT52 1461 aaKnown RBP42.39■■■■■ 4.38
SSBP4-206ENST00000599699 NOS1P29475 1434 aa42.36■■■■■ 4.37
SSBP4-206ENST00000599699 STAG3Q9UJ98 1225 aa42.35■■■■■ 4.37
SSBP4-206ENST00000599699 ANKLE2Q86XL3 938 aa42.34■■■■■ 4.37
SSBP4-206ENST00000599699 IDI1Q13907 227 aa42.31■■■■■ 4.36
SSBP4-206ENST00000599699 SYNMO15061 1565 aa42.31■■■■■ 4.36
SSBP4-206ENST00000599699 TRIM52Q96A61 297 aa42.3■■■■■ 4.36
SSBP4-206ENST00000599699 SLC52A1Q9NWF4 448 aa42.28■■■■■ 4.36
SSBP4-206ENST00000599699 UBR1Q8IWV7 1749 aa42.26■■■■■ 4.36
SSBP4-206ENST00000599699 E9PCH4 1651 aa42.25■■■■■ 4.35
SSBP4-206ENST00000599699 PIK3C2BO00750 1634 aa42.25■■■■■ 4.35
SSBP4-206ENST00000599699 POLR1AO95602 1720 aaPredicted RBP42.2■■■■■ 4.35
SSBP4-206ENST00000599699 NEURL4Q96JN8 1562 aa42.15■■■■■ 4.34
SSBP4-206ENST00000599699 EID1Q9Y6B2 187 aa42.14■■■■■ 4.34
SSBP4-206ENST00000599699 TXNDC2Q86VQ3 553 aa42.13■■■■■ 4.33
SSBP4-206ENST00000599699 NPHP4O75161 1426 aaPredicted RBP42.12■■■■■ 4.33
SSBP4-206ENST00000599699 ADGRB3O60242 1522 aa42.11■■■■■ 4.33
SSBP4-206ENST00000599699 CERKQ8TCT0 537 aa42.11■■■■■ 4.33
SSBP4-206ENST00000599699 TMEM2Q9UHN6 1383 aa42.11■■■■■ 4.33
SSBP4-206ENST00000599699 SLIT1O75093 1534 aa42.1■■■■■ 4.33
SSBP4-206ENST00000599699 CHGAP10645 457 aaKnown RBP42.1■■■■■ 4.33
SSBP4-206ENST00000599699 ARHGAP23Q9P227 1491 aa42.1■■■■■ 4.33
SSBP4-206ENST00000599699 SLC4A1APQ9BWU0 796 aaKnown RBP42.09■■■■■ 4.33
SSBP4-206ENST00000599699 SCAF11Q99590 1463 aaKnown RBP42.09■■■■■ 4.33
SSBP4-206ENST00000599699 KDM5AP29375 1690 aaKnown RBP42.09■■■■■ 4.33
SSBP4-206ENST00000599699 LTKP29376 864 aa42.08■■■■■ 4.33
SSBP4-206ENST00000599699 MED14O60244 1454 aa42.08■■■■■ 4.33
SSBP4-206ENST00000599699 ZNF335Q9H4Z2 1342 aaPredicted RBP42.07■■■■■ 4.33
SSBP4-206ENST00000599699 SETD5Q9C0A6 1442 aa42.05■■■■■ 4.32
SSBP4-206ENST00000599699 IQGAP1P46940 1657 aa42■■■■■ 4.31
SSBP4-206ENST00000599699 SPHKAPQ2M3C7 1700 aa41.98■■■■■ 4.31
SSBP4-206ENST00000599699 ILDR1Q86SU0 546 aaPredicted RBP41.97■■■■■ 4.31
SSBP4-206ENST00000599699 LTBP4Q8N2S1 1624 aa41.97■■■■■ 4.31
SSBP4-206ENST00000599699 TMEM131LA2VDJ0 1609 aa41.95■■■■■ 4.31
SSBP4-206ENST00000599699 ACIN1Q9UKV3 1341 aaKnown RBP41.95■■■■■ 4.31
SSBP4-206ENST00000599699 FBXO41Q8TF61 875 aa41.93■■■■■ 4.3
SSBP4-206ENST00000599699 HDGFP51858 240 aaKnown RBP41.92■■■■■ 4.3
SSBP4-206ENST00000599699 RAB3GAP2Q9H2M9 1393 aa41.9■■■■■ 4.3
SSBP4-206ENST00000599699 PPP1R15AO75807 674 aaPredicted RBP41.9■■■■■ 4.3
SSBP4-206ENST00000599699 RIMS2Q9UQ26 1411 aa41.89■■■■■ 4.3
SSBP4-206ENST00000599699 MPHOSPH9Q99550 1183 aa41.89■■■■■ 4.3
SSBP4-206ENST00000599699 MYO5BQ9ULV0 1848 aa41.89■■■■■ 4.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms