RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 DIP2CQ9Y2E4 1556 aa7.63□□□□□ -1.19
HERC3-213ENST00000598772 AGLP35573 1532 aa7.63□□□□□ -1.19
HERC3-213ENST00000598772 A2ML1A8K2U0 1454 aa7.63□□□□□ -1.19
HERC3-213ENST00000598772 LHX8Q68G74 356 aa7.63□□□□□ -1.19
HERC3-213ENST00000598772 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
HERC3-213ENST00000598772 AFF2P51816 1311 aa7.62□□□□□ -1.19
HERC3-213ENST00000598772 NUP153P49790 1475 aaKnown RBP7.62□□□□□ -1.19
HERC3-213ENST00000598772 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
HERC3-213ENST00000598772 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
HERC3-213ENST00000598772 RBM6P78332 1123 aaKnown RBP7.61□□□□□ -1.19
HERC3-213ENST00000598772 PROSER2Q86WR7 435 aaPredicted RBP7.61□□□□□ -1.19
HERC3-213ENST00000598772 ZNF142P52746 1687 aaPredicted RBP7.6□□□□□ -1.19
HERC3-213ENST00000598772 CLTCQ00610 1675 aaKnown RBP7.6□□□□□ -1.19
HERC3-213ENST00000598772 ATAD2Q6PL18 1390 aa7.6□□□□□ -1.19
HERC3-213ENST00000598772 ABCA6Q8N139 1617 aa7.6□□□□□ -1.19
HERC3-213ENST00000598772 NEURL4Q96JN8 1562 aa7.6□□□□□ -1.19
HERC3-213ENST00000598772 HAX1O00165 279 aa7.6□□□□□ -1.19
HERC3-213ENST00000598772 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
HERC3-213ENST00000598772 U3KPZ7 1027 aaPredicted RBP7.6□□□□□ -1.19
HERC3-213ENST00000598772 POLR1AO95602 1720 aaPredicted RBP7.6□□□□□ -1.19
HERC3-213ENST00000598772 TNRQ92752 1358 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 ARHGAP5Q13017 1502 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 PSDA5PKW4 1024 aaPredicted RBP7.59□□□□□ -1.19
HERC3-213ENST00000598772 ABCB7O75027 752 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 EVX2Q03828 476 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 C8orf37Q96NL8 207 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 SLAIN2Q9P270 581 aa7.59□□□□□ -1.19
HERC3-213ENST00000598772 STRCP1A6NGW2 1772 aa7.59□□□□□ -1.2
HERC3-213ENST00000598772 SPATA31A6Q5VVP1 1343 aa7.58□□□□□ -1.2
HERC3-213ENST00000598772 ABCC1P33527 1531 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 MROH2AA6NES4 1674 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 MLH3Q9UHC1 1453 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 LRP6O75581 1613 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 NGLY1Q96IV0 654 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 RGS12O14924 1447 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
HERC3-213ENST00000598772 CDK12Q9NYV4 1490 aaPredicted RBP7.56□□□□□ -1.2
HERC3-213ENST00000598772 SPAG9O60271 1321 aaKnown RBP7.56□□□□□ -1.2
HERC3-213ENST00000598772 REREQ9P2R6 1566 aa7.56□□□□□ -1.2
HERC3-213ENST00000598772 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
HERC3-213ENST00000598772 FAM135AQ9P2D6 1515 aa7.56□□□□□ -1.2
HERC3-213ENST00000598772 TMEM94Q12767 1356 aa7.56□□□□□ -1.2
HERC3-213ENST00000598772 PHLPP1O60346 1717 aa7.55□□□□□ -1.2
HERC3-213ENST00000598772 DEFB132Q7Z7B7 95 aa7.55□□□□□ -1.2
HERC3-213ENST00000598772 TXNDC2Q86VQ3 553 aa7.55□□□□□ -1.2
HERC3-213ENST00000598772 KDM5CP41229 1560 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 CDK13Q14004 1512 aaKnown RBP7.54□□□□□ -1.2
HERC3-213ENST00000598772 HNRNPMP52272 730 aaKnown RBP eCLIP7.54□□□□□ -1.2
HERC3-213ENST00000598772 C14orf37Q86TY3 774 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 BCANQ96GW7 911 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 IQGAP1P46940 1657 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 ITSN2Q9NZM3 1697 aa7.54□□□□□ -1.2
HERC3-213ENST00000598772 MYO5CQ9NQX4 1742 aa7.53□□□□□ -1.2
HERC3-213ENST00000598772 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
HERC3-213ENST00000598772 MED14O60244 1454 aa7.53□□□□□ -1.2
HERC3-213ENST00000598772 SYNMO15061 1565 aa7.53□□□□□ -1.2
HERC3-213ENST00000598772 ADAMTS2O95450 1211 aa7.52□□□□□ -1.21
HERC3-213ENST00000598772 HRCP23327 699 aa7.52□□□□□ -1.21
HERC3-213ENST00000598772 RBM42Q9BTD8 480 aaKnown RBP7.52□□□□□ -1.21
HERC3-213ENST00000598772 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.21
HERC3-213ENST00000598772 UGGT1Q9NYU2 1555 aa7.51□□□□□ -1.21
HERC3-213ENST00000598772 MSH6P52701 1360 aa7.51□□□□□ -1.21
HERC3-213ENST00000598772 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
HERC3-213ENST00000598772 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
HERC3-213ENST00000598772 LTKP29376 864 aa7.5□□□□□ -1.21
HERC3-213ENST00000598772 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
HERC3-213ENST00000598772 MIA2Q96PC5 1412 aa7.5□□□□□ -1.21
HERC3-213ENST00000598772 KIDINS220Q9ULH0 1771 aa7.49□□□□□ -1.21
HERC3-213ENST00000598772 KIF3BO15066 747 aa7.49□□□□□ -1.21
HERC3-213ENST00000598772 KCNA6P17658 529 aa7.49□□□□□ -1.21
HERC3-213ENST00000598772 DEPDC5O75140 1603 aa7.49□□□□□ -1.21
HERC3-213ENST00000598772 KDM5DQ9BY66 1539 aa7.48□□□□□ -1.21
HERC3-213ENST00000598772 XIRP1Q702N8 1843 aaKnown RBP7.48□□□□□ -1.21
HERC3-213ENST00000598772 C1QTNF8P60827 252 aa7.48□□□□□ -1.21
HERC3-213ENST00000598772 USP21Q9UK80 565 aa7.48□□□□□ -1.21
HERC3-213ENST00000598772 A2MP01023 1474 aa7.48□□□□□ -1.21
HERC3-213ENST00000598772 LRRC9Q6ZRR7 1453 aa7.48□□□□□ -1.21
HERC3-213ENST00000598772 STAG3Q9UJ98 1225 aa7.47□□□□□ -1.21
HERC3-213ENST00000598772 FGD6Q6ZV73 1430 aa7.46□□□□□ -1.21
HERC3-213ENST00000598772 ATF3P18847 181 aa7.46□□□□□ -1.22
HERC3-213ENST00000598772 R3HDM1Q15032 1099 aaKnown RBP7.46□□□□□ -1.22
HERC3-213ENST00000598772 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
HERC3-213ENST00000598772 TRPC5Q9UL62 973 aaPredicted RBP7.46□□□□□ -1.22
HERC3-213ENST00000598772 EP400Q96L91 3159 aa7.46□□□□□ -1.22
HERC3-213ENST00000598772 KIF14Q15058 1648 aa7.45□□□□□ -1.22
HERC3-213ENST00000598772 CLIP1P30622 1438 aa7.45□□□□□ -1.22
HERC3-213ENST00000598772 NLRP1Q9C000 1473 aa7.45□□□□□ -1.22
HERC3-213ENST00000598772 PPP1R1BQ9UD71 204 aaPredicted RBP7.45□□□□□ -1.22
HERC3-213ENST00000598772 SAMD9Q5K651 1589 aa7.45□□□□□ -1.22
HERC3-213ENST00000598772 LRP5O75197 1615 aa7.45□□□□□ -1.22
HERC3-213ENST00000598772 COL16A1Q07092 1604 aaPredicted RBP7.44□□□□□ -1.22
HERC3-213ENST00000598772 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
HERC3-213ENST00000598772 PZPP20742 1482 aa7.43□□□□□ -1.22
HERC3-213ENST00000598772 SAMD9LQ8IVG5 1584 aa7.42□□□□□ -1.22
HERC3-213ENST00000598772 LRRC59Q96AG4 307 aaKnown RBP7.42□□□□□ -1.22
HERC3-213ENST00000598772 BLMP54132 1417 aaPredicted RBP7.42□□□□□ -1.22
HERC3-213ENST00000598772 TROQ12816 1431 aaPredicted RBP7.42□□□□□ -1.22
HERC3-213ENST00000598772 PRXQ9BXM0 1461 aa7.42□□□□□ -1.22
HERC3-213ENST00000598772 ATP7AQ04656 1500 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms