RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
SYMPK-211ENST00000598364 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
SYMPK-211ENST00000598364 DHX29Q7Z478 1369 aaKnown RBP23.97■■□□□ 1.43
SYMPK-211ENST00000598364 TNRQ92752 1358 aa23.97■■□□□ 1.43
SYMPK-211ENST00000598364 ALKQ9UM73 1620 aa23.97■■□□□ 1.43
SYMPK-211ENST00000598364 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
SYMPK-211ENST00000598364 RTEL1-TNFRSF6BF6WH68 1400 aa23.96■■□□□ 1.43
SYMPK-211ENST00000598364 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.42
SYMPK-211ENST00000598364 PZPP20742 1482 aa23.93■■□□□ 1.42
SYMPK-211ENST00000598364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.42
SYMPK-211ENST00000598364 TIAM1Q13009 1591 aa23.92■■□□□ 1.42
SYMPK-211ENST00000598364 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
SYMPK-211ENST00000598364 ANKLE2Q86XL3 938 aa23.9■■□□□ 1.42
SYMPK-211ENST00000598364 KIF3BO15066 747 aa23.89■■□□□ 1.41
SYMPK-211ENST00000598364 MED14O60244 1454 aa23.88■■□□□ 1.41
SYMPK-211ENST00000598364 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
SYMPK-211ENST00000598364 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
SYMPK-211ENST00000598364 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-211ENST00000598364 NPHP4O75161 1426 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-211ENST00000598364 FAM135AQ9P2D6 1515 aa23.85■■□□□ 1.41
SYMPK-211ENST00000598364 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
SYMPK-211ENST00000598364 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
SYMPK-211ENST00000598364 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
SYMPK-211ENST00000598364 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
SYMPK-211ENST00000598364 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
SYMPK-211ENST00000598364 CEP162Q5TB80 1403 aa23.81■■□□□ 1.4
SYMPK-211ENST00000598364 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
SYMPK-211ENST00000598364 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
SYMPK-211ENST00000598364 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
SYMPK-211ENST00000598364 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
SYMPK-211ENST00000598364 IQGAP1P46940 1657 aa23.76■■□□□ 1.39
SYMPK-211ENST00000598364 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
SYMPK-211ENST00000598364 RSPH4AQ5TD94 716 aa23.74■■□□□ 1.39
SYMPK-211ENST00000598364 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
SYMPK-211ENST00000598364 RGS17Q9UGC6 210 aaPredicted RBP23.74■■□□□ 1.39
SYMPK-211ENST00000598364 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.39
SYMPK-211ENST00000598364 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
SYMPK-211ENST00000598364 SYNMO15061 1565 aa23.69■■□□□ 1.38
SYMPK-211ENST00000598364 ABCC3O15438 1527 aa23.69■■□□□ 1.38
SYMPK-211ENST00000598364 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
SYMPK-211ENST00000598364 ERVK-7P63135 1459 aa23.67■■□□□ 1.38
SYMPK-211ENST00000598364 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
SYMPK-211ENST00000598364 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
SYMPK-211ENST00000598364 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
SYMPK-211ENST00000598364 LTKP29376 864 aa23.62■■□□□ 1.37
SYMPK-211ENST00000598364 MROH1Q8NDA8 1641 aa23.61■■□□□ 1.37
SYMPK-211ENST00000598364 UBR1Q8IWV7 1749 aa23.6■■□□□ 1.37
SYMPK-211ENST00000598364 SCAF11Q99590 1463 aaKnown RBP23.6■■□□□ 1.37
SYMPK-211ENST00000598364 ARHGAP23Q9P227 1491 aa23.59■■□□□ 1.37
SYMPK-211ENST00000598364 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
SYMPK-211ENST00000598364 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
SYMPK-211ENST00000598364 SLIT1O75093 1534 aa23.56■■□□□ 1.36
SYMPK-211ENST00000598364 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
SYMPK-211ENST00000598364 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
SYMPK-211ENST00000598364 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
SYMPK-211ENST00000598364 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
SYMPK-211ENST00000598364 CEP152O94986 1710 aa23.51■■□□□ 1.35
SYMPK-211ENST00000598364 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
SYMPK-211ENST00000598364 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
SYMPK-211ENST00000598364 TMEM94Q12767 1356 aa23.45■■□□□ 1.34
SYMPK-211ENST00000598364 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
SYMPK-211ENST00000598364 TMEM2Q9UHN6 1383 aa23.44■■□□□ 1.34
SYMPK-211ENST00000598364 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
SYMPK-211ENST00000598364 DUOX2Q9NRD8 1548 aa23.43■■□□□ 1.34
SYMPK-211ENST00000598364 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
SYMPK-211ENST00000598364 PRDM15P57071 1507 aaPredicted RBP23.42■■□□□ 1.34
SYMPK-211ENST00000598364 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
SYMPK-211ENST00000598364 KCNA6P17658 529 aa23.41■■□□□ 1.34
SYMPK-211ENST00000598364 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
SYMPK-211ENST00000598364 ROBO1Q9Y6N7 1651 aa23.4■■□□□ 1.34
SYMPK-211ENST00000598364 TET3O43151 1660 aa23.38■■□□□ 1.33
SYMPK-211ENST00000598364 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
SYMPK-211ENST00000598364 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
SYMPK-211ENST00000598364 IDI1Q13907 227 aa23.36■■□□□ 1.33
SYMPK-211ENST00000598364 SLC26A8Q96RN1 970 aa23.36■■□□□ 1.33
SYMPK-211ENST00000598364 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
SYMPK-211ENST00000598364 PROSER2Q86WR7 435 aaPredicted RBP23.35■■□□□ 1.33
SYMPK-211ENST00000598364 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
SYMPK-211ENST00000598364 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
SYMPK-211ENST00000598364 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
SYMPK-211ENST00000598364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
SYMPK-211ENST00000598364 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
SYMPK-211ENST00000598364 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
SYMPK-211ENST00000598364 ABCC5O15440 1437 aa23.32■■□□□ 1.32
SYMPK-211ENST00000598364 SETD1AO15047 1707 aaKnown RBP23.31■■□□□ 1.32
SYMPK-211ENST00000598364 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
SYMPK-211ENST00000598364 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
SYMPK-211ENST00000598364 NKTRP30414 1462 aaKnown RBP23.29■■□□□ 1.32
SYMPK-211ENST00000598364 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
SYMPK-211ENST00000598364 SLAIN2Q9P270 581 aa23.27■■□□□ 1.32
SYMPK-211ENST00000598364 JCADQ9P266 1359 aa23.27■■□□□ 1.31
SYMPK-211ENST00000598364 NOS1P29475 1434 aa23.26■■□□□ 1.31
SYMPK-211ENST00000598364 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
SYMPK-211ENST00000598364 MSH6P52701 1360 aa23.25■■□□□ 1.31
SYMPK-211ENST00000598364 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
SYMPK-211ENST00000598364 KANK1Q14678 1352 aa23.24■■□□□ 1.31
SYMPK-211ENST00000598364 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
SYMPK-211ENST00000598364 DAPK1P53355 1430 aa23.21■■□□□ 1.31
SYMPK-211ENST00000598364 LRP6O75581 1613 aa23.21■■□□□ 1.31
SYMPK-211ENST00000598364 COL16A1Q07092 1604 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms