RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 PTPRKQ15262 1439 aa35.01■■■■□ 3.2
IRF3-220ENST00000598108 WASHC2CQ9Y4E1 1318 aa35.01■■■■□ 3.19
IRF3-220ENST00000598108 CLTCQ00610 1675 aaKnown RBP34.99■■■■□ 3.19
IRF3-220ENST00000598108 MROH2AA6NES4 1674 aa34.95■■■■□ 3.18
IRF3-220ENST00000598108 ADGRL2O95490 1459 aa34.94■■■■□ 3.18
IRF3-220ENST00000598108 ERBINQ96RT1 1412 aa34.93■■■■□ 3.18
IRF3-220ENST00000598108 NPATQ14207 1427 aa34.92■■■■□ 3.18
IRF3-220ENST00000598108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.92■■■■□ 3.183e-6■□□□□ 11.3
IRF3-220ENST00000598108 ITGAEP38570 1179 aa34.92■■■■□ 3.18
IRF3-220ENST00000598108 UHRF1BP1Q6BDS2 1440 aa34.9■■■■□ 3.18
IRF3-220ENST00000598108 FBXO31Q5XUX0 539 aaPredicted RBP34.9■■■■□ 3.18
IRF3-220ENST00000598108 RNF17Q9BXT8 1623 aaKnown RBP34.9■■■■□ 3.18
IRF3-220ENST00000598108 EIF2AK4Q9P2K8 1649 aaKnown RBP34.9■■■■□ 3.18
IRF3-220ENST00000598108 KDM5DQ9BY66 1539 aa34.9■■■■□ 3.18
IRF3-220ENST00000598108 SETD1BQ9UPS6 1966 aaKnown RBP34.87■■■■□ 3.17
IRF3-220ENST00000598108 MROH1Q8NDA8 1641 aa34.86■■■■□ 3.17
IRF3-220ENST00000598108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.86■■■■□ 3.175e-6■■■□□ 18.6
IRF3-220ENST00000598108 RRBP1Q9P2E9 1410 aaKnown RBP34.86■■■■□ 3.17
IRF3-220ENST00000598108 FAM135AQ9P2D6 1515 aa34.86■■■■□ 3.17
IRF3-220ENST00000598108 PREX1Q8TCU6 1659 aa34.84■■■■□ 3.17
IRF3-220ENST00000598108 ABCC3O15438 1527 aa34.83■■■■□ 3.17
IRF3-220ENST00000598108 PZPP20742 1482 aa34.8■■■■□ 3.16
IRF3-220ENST00000598108 ROCK1Q13464 1354 aa34.8■■■■□ 3.16
IRF3-220ENST00000598108 ANKRD50Q9ULJ7 1429 aa34.8■■■■□ 3.16
IRF3-220ENST00000598108 PRDM15P57071 1507 aaPredicted RBP34.74■■■■□ 3.15
IRF3-220ENST00000598108 TNRQ92752 1358 aa34.74■■■■□ 3.15
IRF3-220ENST00000598108 KANK1Q14678 1352 aa34.7■■■■□ 3.15
IRF3-220ENST00000598108 DEPDC5O75140 1603 aa34.69■■■■□ 3.14
IRF3-220ENST00000598108 ZC3H13Q5T200 1668 aaKnown RBP34.66■■■■□ 3.14
IRF3-220ENST00000598108 CEP152O94986 1710 aa34.64■■■■□ 3.14
IRF3-220ENST00000598108 MYO3AQ8NEV4 1616 aa34.63■■■■□ 3.13
IRF3-220ENST00000598108 VWDEQ8N2E2 1590 aa34.63■■■■□ 3.13
IRF3-220ENST00000598108 ARHGAP31Q2M1Z3 1444 aa34.63■■■■□ 3.13
IRF3-220ENST00000598108 ERVK-7P63135 1459 aa34.61■■■■□ 3.13
IRF3-220ENST00000598108 A2ML1A8K2U0 1454 aa34.6■■■■□ 3.13
IRF3-220ENST00000598108 CAMSAP1Q5T5Y3 1602 aa34.6■■■■□ 3.13
IRF3-220ENST00000598108 CEP170BQ9Y4F5 1589 aaPredicted RBP34.6■■■■□ 3.13
IRF3-220ENST00000598108 LMTK2Q8IWU2 1503 aa34.59■■■■□ 3.13
IRF3-220ENST00000598108 SPATA31D1Q6ZQQ2 1576 aa34.57■■■■□ 3.13
IRF3-220ENST00000598108 STRCQ7RTU9 1775 aa34.55■■■■□ 3.12
IRF3-220ENST00000598108 NCKAP5LQ9HCH0 1330 aa34.55■■■■□ 3.12
IRF3-220ENST00000598108 NLRP1Q9C000 1473 aa34.53■■■■□ 3.12
IRF3-220ENST00000598108 DMRT2Q9Y5R5 561 aa34.53■■■■□ 3.12
IRF3-220ENST00000598108 ZNF142P52746 1687 aaPredicted RBP34.53■■■■□ 3.12
IRF3-220ENST00000598108 NAIPQ13075 1403 aa34.49■■■■□ 3.11
IRF3-220ENST00000598108 NUP155O75694 1391 aa34.48■■■■□ 3.11
IRF3-220ENST00000598108 PLA2R1Q13018 1463 aa34.46■■■■□ 3.11
IRF3-220ENST00000598108 UNC13BO14795 1591 aa34.46■■■■□ 3.11
IRF3-220ENST00000598108 THEMISQ8N1K5 641 aaPredicted RBP34.46■■■■□ 3.11
IRF3-220ENST00000598108 EFCAB6Q5THR3 1501 aa34.45■■■■□ 3.11
IRF3-220ENST00000598108 PKD2Q13563 968 aa34.45■■■■□ 3.11
IRF3-220ENST00000598108 CFAP65Q6ZU64 1925 aaKnown RBP34.45■■■■□ 3.11
IRF3-220ENST00000598108 PTPRTO14522 1441 aa34.44■■■■□ 3.1
IRF3-220ENST00000598108 UGGT1Q9NYU2 1555 aa34.42■■■■□ 3.1
IRF3-220ENST00000598108 NOS1P29475 1434 aa34.41■■■■□ 3.1
IRF3-220ENST00000598108 HFM1A2PYH4 1435 aa34.4■■■■□ 3.1
IRF3-220ENST00000598108 IDI1Q13907 227 aa34.4■■■■□ 3.1
IRF3-220ENST00000598108 RPRD2Q5VT52 1461 aaKnown RBP34.36■■■■□ 3.09
IRF3-220ENST00000598108 ANKLE2Q86XL3 938 aa34.35■■■■□ 3.09
IRF3-220ENST00000598108 TET3O43151 1660 aa34.35■■■■□ 3.09
IRF3-220ENST00000598108 IQGAP3Q86VI3 1631 aa34.33■■■■□ 3.09
IRF3-220ENST00000598108 SYNMO15061 1565 aa34.32■■■■□ 3.09
IRF3-220ENST00000598108 SLC52A1Q9NWF4 448 aa34.3■■■■□ 3.08
IRF3-220ENST00000598108 STAG3Q9UJ98 1225 aa34.27■■■■□ 3.08
IRF3-220ENST00000598108 GCC2Q8IWJ2 1684 aa34.27■■■■□ 3.08
IRF3-220ENST00000598108 TRIM52Q96A61 297 aa34.26■■■■□ 3.08
IRF3-220ENST00000598108 UBR1Q8IWV7 1749 aa34.24■■■■□ 3.07
IRF3-220ENST00000598108 PIK3C2BO00750 1634 aa34.23■■■■□ 3.07
IRF3-220ENST00000598108 E9PCH4 1651 aa34.23■■■■□ 3.07
IRF3-220ENST00000598108 LTKP29376 864 aa34.23■■■■□ 3.07
IRF3-220ENST00000598108 CERKQ8TCT0 537 aa34.23■■■■□ 3.07
IRF3-220ENST00000598108 NEURL4Q96JN8 1562 aa34.23■■■■□ 3.07
IRF3-220ENST00000598108 TXNDC2Q86VQ3 553 aa34.21■■■■□ 3.07
IRF3-220ENST00000598108 ZNF335Q9H4Z2 1342 aaPredicted RBP34.2■■■■□ 3.07
IRF3-220ENST00000598108 ARHGAP23Q9P227 1491 aa34.2■■■■□ 3.06
IRF3-220ENST00000598108 TMEM2Q9UHN6 1383 aa34.19■■■■□ 3.06
IRF3-220ENST00000598108 ILDR1Q86SU0 546 aaPredicted RBP34.18■■■■□ 3.06
IRF3-220ENST00000598108 NPHP4O75161 1426 aaPredicted RBP34.18■■■■□ 3.06
IRF3-220ENST00000598108 MED14O60244 1454 aa34.17■■■■□ 3.06
IRF3-220ENST00000598108 SLIT1O75093 1534 aa34.16■■■■□ 3.06
IRF3-220ENST00000598108 EID1Q9Y6B2 187 aa34.14■■■■□ 3.06
IRF3-220ENST00000598108 SCAF11Q99590 1463 aaKnown RBP34.14■■■■□ 3.06
IRF3-220ENST00000598108 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
IRF3-220ENST00000598108 SLC4A1APQ9BWU0 796 aaKnown RBP34.12■■■■□ 3.05
IRF3-220ENST00000598108 ADGRB3O60242 1522 aa34.11■■■■□ 3.05
IRF3-220ENST00000598108 POLR1AO95602 1720 aaPredicted RBP34.11■■■■□ 3.05
IRF3-220ENST00000598108 CHGAP10645 457 aaKnown RBP34.11■■■■□ 3.05
IRF3-220ENST00000598108 SETD5Q9C0A6 1442 aa34.1■■■■□ 3.05
IRF3-220ENST00000598108 FBXO41Q8TF61 875 aa34.07■■■■□ 3.04
IRF3-220ENST00000598108 KDM5AP29375 1690 aaKnown RBP34.06■■■■□ 3.04
IRF3-220ENST00000598108 TMEM131LA2VDJ0 1609 aa34.02■■■■□ 3.04
IRF3-220ENST00000598108 FOXD1Q16676 465 aa34.02■■■■□ 3.04
IRF3-220ENST00000598108 MPHOSPH9Q99550 1183 aa34.01■■■■□ 3.03
IRF3-220ENST00000598108 IQGAP1P46940 1657 aa34■■■■□ 3.03
IRF3-220ENST00000598108 RAB3GAP2Q9H2M9 1393 aa33.99■■■■□ 3.03
IRF3-220ENST00000598108 ZFYVE9O95405 1425 aa33.99■■■■□ 3.03
IRF3-220ENST00000598108 RIMS2Q9UQ26 1411 aa33.98■■■■□ 3.03
IRF3-220ENST00000598108 NUTM2DQ5VT03 806 aaPredicted RBP33.96■■■■□ 3.03
IRF3-220ENST00000598108 SENP3Q9H4L4 574 aaPredicted RBP33.96■■■■□ 3.03
IRF3-220ENST00000598108 SPHKAPQ2M3C7 1700 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms