RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 CPS1P31327 1500 aa26.09■■□□□ 1.77
CAPN12-208ENST00000597740 FBXO31Q5XUX0 539 aaPredicted RBP26.09■■□□□ 1.77
CAPN12-208ENST00000597740 TNRQ92752 1358 aa26.08■■□□□ 1.77
CAPN12-208ENST00000597740 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.77
CAPN12-208ENST00000597740 NEURL4Q96JN8 1562 aa26.08■■□□□ 1.77
CAPN12-208ENST00000597740 SHANK2Q9UPX8 1470 aa26.08■■□□□ 1.77
CAPN12-208ENST00000597740 MBD5Q9P267 1494 aa26.07■■□□□ 1.76
CAPN12-208ENST00000597740 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
CAPN12-208ENST00000597740 TIAM1Q13009 1591 aa26.06■■□□□ 1.76
CAPN12-208ENST00000597740 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
CAPN12-208ENST00000597740 KIF3BO15066 747 aa26.04■■□□□ 1.76
CAPN12-208ENST00000597740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.02■■□□□ 1.76
CAPN12-208ENST00000597740 PZPP20742 1482 aa26.02■■□□□ 1.76
CAPN12-208ENST00000597740 ANKLE2Q86XL3 938 aa26.01■■□□□ 1.75
CAPN12-208ENST00000597740 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
CAPN12-208ENST00000597740 WASHC2CQ9Y4E1 1318 aa25.99■■□□□ 1.75
CAPN12-208ENST00000597740 VWDEQ8N2E2 1590 aa25.99■■□□□ 1.75
CAPN12-208ENST00000597740 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
CAPN12-208ENST00000597740 EHBP1L1Q8N3D4 1523 aa25.98■■□□□ 1.75
CAPN12-208ENST00000597740 THEMISQ8N1K5 641 aaPredicted RBP25.97■■□□□ 1.75
CAPN12-208ENST00000597740 VPS8Q8N3P4 1428 aa25.96■■□□□ 1.75
CAPN12-208ENST00000597740 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.74
CAPN12-208ENST00000597740 NPHP4O75161 1426 aaPredicted RBP25.95■■□□□ 1.74
CAPN12-208ENST00000597740 CCDC141Q6ZP82 1450 aa25.94■■□□□ 1.74
CAPN12-208ENST00000597740 MIA2Q96PC5 1412 aa25.94■■□□□ 1.74
CAPN12-208ENST00000597740 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
CAPN12-208ENST00000597740 NLRP1Q9C000 1473 aa25.93■■□□□ 1.74
CAPN12-208ENST00000597740 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
CAPN12-208ENST00000597740 ALKQ9UM73 1620 aa25.92■■□□□ 1.74
CAPN12-208ENST00000597740 MED14O60244 1454 aa25.91■■□□□ 1.74
CAPN12-208ENST00000597740 DEPDC5O75140 1603 aa25.9■■□□□ 1.74
CAPN12-208ENST00000597740 CAMSAP2Q08AD1 1489 aa25.9■■□□□ 1.74
CAPN12-208ENST00000597740 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
CAPN12-208ENST00000597740 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
CAPN12-208ENST00000597740 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
CAPN12-208ENST00000597740 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.72
CAPN12-208ENST00000597740 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
CAPN12-208ENST00000597740 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
CAPN12-208ENST00000597740 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
CAPN12-208ENST00000597740 RNF17Q9BXT8 1623 aaKnown RBP25.8■■□□□ 1.72
CAPN12-208ENST00000597740 ABCC3O15438 1527 aa25.78■■□□□ 1.72
CAPN12-208ENST00000597740 SYNMO15061 1565 aa25.78■■□□□ 1.72
CAPN12-208ENST00000597740 ARHGEF5Q12774 1597 aa25.78■■□□□ 1.72
CAPN12-208ENST00000597740 ERVK-7P63135 1459 aa25.74■■□□□ 1.71
CAPN12-208ENST00000597740 ZC3H13Q5T200 1668 aaKnown RBP25.74■■□□□ 1.71
CAPN12-208ENST00000597740 SCAF11Q99590 1463 aaKnown RBP25.69■■□□□ 1.7
CAPN12-208ENST00000597740 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
CAPN12-208ENST00000597740 UBR1Q8IWV7 1749 aa25.67■■□□□ 1.7
CAPN12-208ENST00000597740 RGS17Q9UGC6 210 aaPredicted RBP25.67■■□□□ 1.7
CAPN12-208ENST00000597740 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
CAPN12-208ENST00000597740 MAST1Q9Y2H9 1570 aa25.65■■□□□ 1.7
CAPN12-208ENST00000597740 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
CAPN12-208ENST00000597740 CEP152O94986 1710 aa25.64■■□□□ 1.7
CAPN12-208ENST00000597740 LTKP29376 864 aa25.64■■□□□ 1.7
CAPN12-208ENST00000597740 APLP2Q06481 763 aa25.64■■□□□ 1.7
CAPN12-208ENST00000597740 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
CAPN12-208ENST00000597740 ARHGAP23Q9P227 1491 aa25.6■■□□□ 1.69
CAPN12-208ENST00000597740 CFAP65Q6ZU64 1925 aaKnown RBP25.6■■□□□ 1.69
CAPN12-208ENST00000597740 SLIT1O75093 1534 aa25.59■■□□□ 1.69
CAPN12-208ENST00000597740 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
CAPN12-208ENST00000597740 XIRP1Q702N8 1843 aaKnown RBP25.57■■□□□ 1.68
CAPN12-208ENST00000597740 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
CAPN12-208ENST00000597740 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
CAPN12-208ENST00000597740 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
CAPN12-208ENST00000597740 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
CAPN12-208ENST00000597740 ARHGAP31Q2M1Z3 1444 aa25.52■■□□□ 1.68
CAPN12-208ENST00000597740 POTEAQ6S8J7 498 aa25.51■■□□□ 1.67
CAPN12-208ENST00000597740 TMEM94Q12767 1356 aa25.51■■□□□ 1.67
CAPN12-208ENST00000597740 PIK3C2BO00750 1634 aa25.5■■□□□ 1.67
CAPN12-208ENST00000597740 PRDM15P57071 1507 aaPredicted RBP25.5■■□□□ 1.67
CAPN12-208ENST00000597740 TMEM2Q9UHN6 1383 aa25.5■■□□□ 1.67
CAPN12-208ENST00000597740 STAG3Q9UJ98 1225 aa25.5■■□□□ 1.67
CAPN12-208ENST00000597740 MYOM3Q5VTT5 1437 aa25.49■■□□□ 1.67
CAPN12-208ENST00000597740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
CAPN12-208ENST00000597740 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
CAPN12-208ENST00000597740 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
CAPN12-208ENST00000597740 RRP7BPQ9NSQ0 103 aa25.45■■□□□ 1.66
CAPN12-208ENST00000597740 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.66
CAPN12-208ENST00000597740 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
CAPN12-208ENST00000597740 KCNA6P17658 529 aa25.44■■□□□ 1.66
CAPN12-208ENST00000597740 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
CAPN12-208ENST00000597740 SLC26A8Q96RN1 970 aa25.44■■□□□ 1.66
CAPN12-208ENST00000597740 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
CAPN12-208ENST00000597740 EFCAB6Q5THR3 1501 aa25.42■■□□□ 1.66
CAPN12-208ENST00000597740 KANK1Q14678 1352 aa25.41■■□□□ 1.66
CAPN12-208ENST00000597740 IDI1Q13907 227 aa25.39■■□□□ 1.66
CAPN12-208ENST00000597740 ABCC5O15440 1437 aa25.38■■□□□ 1.65
CAPN12-208ENST00000597740 CROCC2H7BZ55 1655 aa25.37■■□□□ 1.65
CAPN12-208ENST00000597740 TET3O43151 1660 aa25.36■■□□□ 1.65
CAPN12-208ENST00000597740 KDM5AP29375 1690 aaKnown RBP25.36■■□□□ 1.65
CAPN12-208ENST00000597740 BCANQ96GW7 911 aa25.34■■□□□ 1.65
CAPN12-208ENST00000597740 NKTRP30414 1462 aaKnown RBP25.34■■□□□ 1.65
CAPN12-208ENST00000597740 MSH6P52701 1360 aa25.33■■□□□ 1.65
CAPN12-208ENST00000597740 SETD1AO15047 1707 aaKnown RBP25.33■■□□□ 1.65
CAPN12-208ENST00000597740 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
CAPN12-208ENST00000597740 DAPK1P53355 1430 aa25.31■■□□□ 1.64
CAPN12-208ENST00000597740 LMTK2Q8IWU2 1503 aa25.31■■□□□ 1.64
CAPN12-208ENST00000597740 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
CAPN12-208ENST00000597740 SLAIN2Q9P270 581 aa25.3■■□□□ 1.64
CAPN12-208ENST00000597740 ADGRB3O60242 1522 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms