RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 ABCC1P33527 1531 aa31.7■■■□□ 2.67
SPTBN4-209ENST00000596411 ATP10AO60312 1499 aa31.7■■■□□ 2.67
SPTBN4-209ENST00000596411 LAMC1P11047 1609 aa31.67■■■□□ 2.66
SPTBN4-209ENST00000596411 TRPM1Q7Z4N2 1603 aa31.65■■■□□ 2.66
SPTBN4-209ENST00000596411 CCDC144AA2RUR9 1427 aa31.65■■■□□ 2.66
SPTBN4-209ENST00000596411 PLA2R1Q13018 1463 aa31.63■■■□□ 2.65
SPTBN4-209ENST00000596411 PRAG1Q86YV5 1406 aa31.61■■■□□ 2.65
SPTBN4-209ENST00000596411 CCDC184Q52MB2 194 aa31.61■■■□□ 2.65
SPTBN4-209ENST00000596411 E9PCH4 1651 aa31.6■■■□□ 2.65
SPTBN4-209ENST00000596411 CARD11Q9BXL7 1154 aa31.59■■■□□ 2.65
SPTBN4-209ENST00000596411 MRS2Q9HD23 443 aa31.59■■■□□ 2.65
SPTBN4-209ENST00000596411 ZNF326Q5BKZ1 582 aaKnown RBP31.59■■■□□ 2.65
SPTBN4-209ENST00000596411 ZBED9Q6R2W3 1325 aa31.59■■■□□ 2.65
SPTBN4-209ENST00000596411 GPRASP1Q5JY77 1395 aa31.58■■■□□ 2.65
SPTBN4-209ENST00000596411 EFCAB2Q5VUJ9 269 aa31.57■■■□□ 2.64
SPTBN4-209ENST00000596411 RTEL1-TNFRSF6BF6WH68 1400 aa31.56■■■□□ 2.64
SPTBN4-209ENST00000596411 EIF2AK4Q9P2K8 1649 aaKnown RBP31.56■■■□□ 2.64
SPTBN4-209ENST00000596411 TSHZ2Q9NRE2 1034 aa31.55■■■□□ 2.64
SPTBN4-209ENST00000596411 KTN1Q86UP2 1357 aaKnown RBP31.53■■■□□ 2.64
SPTBN4-209ENST00000596411 DCAF11Q8TEB1 546 aa31.53■■■□□ 2.64
SPTBN4-209ENST00000596411 A2MP01023 1474 aa31.53■■■□□ 2.64
SPTBN4-209ENST00000596411 ERICH6BQ5W0A0 696 aa31.52■■■□□ 2.64
SPTBN4-209ENST00000596411 PRDM15P57071 1507 aaPredicted RBP31.48■■■□□ 2.63
SPTBN4-209ENST00000596411 ZFYVE16Q7Z3T8 1539 aa31.47■■■□□ 2.63
SPTBN4-209ENST00000596411 BCANQ96GW7 911 aa31.46■■■□□ 2.63
SPTBN4-209ENST00000596411 TRAPPC8Q9Y2L5 1435 aa31.46■■■□□ 2.63
SPTBN4-209ENST00000596411 DEPDC5O75140 1603 aa31.45■■■□□ 2.63
SPTBN4-209ENST00000596411 ABCA9Q8IUA7 1624 aa31.45■■■□□ 2.63
SPTBN4-209ENST00000596411 ST20-MTHFSA0A0A6YYL1 179 aa31.43■■■□□ 2.62
SPTBN4-209ENST00000596411 KDM2AQ9Y2K7 1162 aa31.43■■■□□ 2.62
SPTBN4-209ENST00000596411 WDR7Q9Y4E6 1490 aa31.43■■■□□ 2.62
SPTBN4-209ENST00000596411 FAM9BQ8IZU0 186 aa31.42■■■□□ 2.62
SPTBN4-209ENST00000596411 RNF17Q9BXT8 1623 aaKnown RBP31.42■■■□□ 2.62
SPTBN4-209ENST00000596411 INO80Q9ULG1 1556 aaPredicted RBP31.39■■■□□ 2.62
SPTBN4-209ENST00000596411 TRPM2O94759 1503 aa31.37■■■□□ 2.61
SPTBN4-209ENST00000596411 COL17A1Q9UMD9 1497 aaPredicted RBP31.36■■■□□ 2.61
SPTBN4-209ENST00000596411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.34■■■□□ 2.61
SPTBN4-209ENST00000596411 VWDEQ8N2E2 1590 aa31.34■■■□□ 2.61
SPTBN4-209ENST00000596411 BRD4O60885 1362 aaPredicted RBP31.33■■■□□ 2.61
SPTBN4-209ENST00000596411 SPAG9O60271 1321 aaKnown RBP31.33■■■□□ 2.61
SPTBN4-209ENST00000596411 RALBP1Q15311 655 aa31.33■■■□□ 2.61
SPTBN4-209ENST00000596411 TET3O43151 1660 aa31.33■■■□□ 2.61
SPTBN4-209ENST00000596411 NEURL4Q96JN8 1562 aa31.32■■■□□ 2.6
SPTBN4-209ENST00000596411 PTPRTO14522 1441 aa31.32■■■□□ 2.6
SPTBN4-209ENST00000596411 SMG6Q86US8 1419 aaKnown RBP31.32■■■□□ 2.6
SPTBN4-209ENST00000596411 CEP152O94986 1710 aa31.31■■■□□ 2.6
SPTBN4-209ENST00000596411 ATP7AQ04656 1500 aa31.3■■■□□ 2.6
SPTBN4-209ENST00000596411 SPHKAPQ2M3C7 1700 aa31.3■■■□□ 2.6
SPTBN4-209ENST00000596411 STAC3Q96MF2 364 aa31.29■■■□□ 2.6
SPTBN4-209ENST00000596411 LRPPRCP42704 1394 aaKnown RBP31.28■■■□□ 2.6
SPTBN4-209ENST00000596411 MYT1Q01538 1121 aa31.28■■■□□ 2.6
SPTBN4-209ENST00000596411 POLR3GLQ9BT43 218 aa31.28■■■□□ 2.6
SPTBN4-209ENST00000596411 FANCAO15360 1455 aa31.28■■■□□ 2.6
SPTBN4-209ENST00000596411 MYBBP1AQ9BQG0 1328 aaKnown RBP31.27■■■□□ 2.6
SPTBN4-209ENST00000596411 MADDQ8WXG6 1647 aa31.27■■■□□ 2.6
SPTBN4-209ENST00000596411 PNISRQ8TF01 805 aaKnown RBP31.26■■■□□ 2.59
SPTBN4-209ENST00000596411 WASHC2CQ9Y4E1 1318 aa31.24■■■□□ 2.59
SPTBN4-209ENST00000596411 PARD3Q8TEW0 1356 aa31.23■■■□□ 2.59
SPTBN4-209ENST00000596411 RGL3Q3MIN7 710 aa31.23■■■□□ 2.59
SPTBN4-209ENST00000596411 NBPF1Q3BBV0 1214 aa31.22■■■□□ 2.59
SPTBN4-209ENST00000596411 IQGAP1P46940 1657 aa31.21■■■□□ 2.59
SPTBN4-209ENST00000596411 TESK2Q96S53 571 aa31.21■■■□□ 2.59
SPTBN4-209ENST00000596411 CLTCL1P53675 1640 aa31.18■■■□□ 2.58
SPTBN4-209ENST00000596411 TMC1Q8TDI8 760 aa31.18■■■□□ 2.58
SPTBN4-209ENST00000596411 PPP4R2Q9NY27 417 aa31.18■■■□□ 2.58
SPTBN4-209ENST00000596411 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
SPTBN4-209ENST00000596411 ZMYM4Q5VZL5 1548 aa31.17■■■□□ 2.58
SPTBN4-209ENST00000596411 ADGRL1O94910 1474 aa31.17■■■□□ 2.58
SPTBN4-209ENST00000596411 AFAP1Q8N556 730 aa31.16■■■□□ 2.58
SPTBN4-209ENST00000596411 KIAA1210Q9ULL0 1709 aa31.16■■■□□ 2.58
SPTBN4-209ENST00000596411 INSRP06213 1382 aa31.16■■■□□ 2.58
SPTBN4-209ENST00000596411 MROH1Q8NDA8 1641 aa31.16■■■□□ 2.58
SPTBN4-209ENST00000596411 KANK1Q14678 1352 aa31.15■■■□□ 2.58
SPTBN4-209ENST00000596411 NUDCQ9Y266 331 aa31.14■■■□□ 2.58
SPTBN4-209ENST00000596411 PER1O15534 1290 aaPredicted RBP31.14■■■□□ 2.58
SPTBN4-209ENST00000596411 RNF123Q5XPI4 1314 aa31.13■■■□□ 2.57
SPTBN4-209ENST00000596411 ASXL2Q76L83 1435 aa31.13■■■□□ 2.57
SPTBN4-209ENST00000596411 DISP3Q9P2K9 1392 aa31.12■■■□□ 2.57
SPTBN4-209ENST00000596411 NLRP13Q86W25 1043 aa31.1■■■□□ 2.57
SPTBN4-209ENST00000596411 TMF1P82094 1093 aa31.09■■■□□ 2.57
SPTBN4-209ENST00000596411 CFAP74Q9C0B2 1584 aa31.09■■■□□ 2.57
SPTBN4-209ENST00000596411 LMTK2Q8IWU2 1503 aa31.08■■■□□ 2.57
SPTBN4-209ENST00000596411 KIDINS220Q9ULH0 1771 aa31.07■■■□□ 2.56
SPTBN4-209ENST00000596411 SCAF11Q99590 1463 aaKnown RBP31.05■■■□□ 2.56
SPTBN4-209ENST00000596411 EFCAB6Q5THR3 1501 aa31.05■■■□□ 2.56
SPTBN4-209ENST00000596411 IRX6P78412 446 aaPredicted RBP31.04■■■□□ 2.56
SPTBN4-209ENST00000596411 MYOM2P54296 1465 aa31.04■■■□□ 2.56
SPTBN4-209ENST00000596411 ZNF518AQ6AHZ1 1483 aa31.04■■■□□ 2.56
SPTBN4-209ENST00000596411 SYNMO15061 1565 aa31■■■□□ 2.55
SPTBN4-209ENST00000596411 RBM19Q9Y4C8 960 aaKnown RBP30.99■■■□□ 2.55
SPTBN4-209ENST00000596411 IFT172Q9UG01 1749 aa30.98■■■□□ 2.55
SPTBN4-209ENST00000596411 MAP3K4Q9Y6R4 1608 aa30.97■■■□□ 2.55
SPTBN4-209ENST00000596411 KIF1BO60333 1816 aa30.95■■■□□ 2.55
SPTBN4-209ENST00000596411 CNGB1Q14028 1251 aaPredicted RBP30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 CDCA8Q53HL2 280 aa30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 PPRC1Q5VV67 1664 aaKnown RBP30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 EIF3AQ14152 1382 aaKnown RBP30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 KIF3BO15066 747 aa30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 BLMP54132 1417 aaPredicted RBP30.93■■■□□ 2.54
SPTBN4-209ENST00000596411 PANK3Q9H999 370 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms