RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 CNTLNQ9NXG0 1405 aa30.36■■■□□ 2.45
CCDC61-205ENST00000596161 PTPRMP28827 1452 aa30.36■■■□□ 2.45
CCDC61-205ENST00000596161 RNF17Q9BXT8 1623 aaKnown RBP30.34■■■□□ 2.45
CCDC61-205ENST00000596161 FAM135AQ9P2D6 1515 aa30.32■■■□□ 2.44
CCDC61-205ENST00000596161 ANKRD50Q9ULJ7 1429 aa30.32■■■□□ 2.44
CCDC61-205ENST00000596161 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
CCDC61-205ENST00000596161 MROH2AA6NES4 1674 aa30.27■■■□□ 2.44
CCDC61-205ENST00000596161 CLTCQ00610 1675 aaKnown RBP30.25■■■□□ 2.43
CCDC61-205ENST00000596161 MROH1Q8NDA8 1641 aa30.24■■■□□ 2.43
CCDC61-205ENST00000596161 WASHC2CQ9Y4E1 1318 aa30.23■■■□□ 2.43
CCDC61-205ENST00000596161 PRDM15P57071 1507 aaPredicted RBP30.23■■■□□ 2.43
CCDC61-205ENST00000596161 DEPDC5O75140 1603 aa30.23■■■□□ 2.43
CCDC61-205ENST00000596161 ZC3H13Q5T200 1668 aaKnown RBP30.21■■■□□ 2.43
CCDC61-205ENST00000596161 KANK1Q14678 1352 aa30.21■■■□□ 2.43
CCDC61-205ENST00000596161 ZMYM3Q14202 1370 aa30.19■■■□□ 2.42
CCDC61-205ENST00000596161 PLPPR3Q6T4P5 718 aa30.19■■■□□ 2.42
CCDC61-205ENST00000596161 GCC2Q8IWJ2 1684 aa30.19■■■□□ 2.42
CCDC61-205ENST00000596161 HFM1A2PYH4 1435 aa30.19■■■□□ 2.42
CCDC61-205ENST00000596161 C3P01024 1663 aa30.18■■■□□ 2.42
CCDC61-205ENST00000596161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.18■■■□□ 2.42
CCDC61-205ENST00000596161 NAIPQ13075 1403 aa30.18■■■□□ 2.42
CCDC61-205ENST00000596161 ABCC3O15438 1527 aa30.17■■■□□ 2.42
CCDC61-205ENST00000596161 CEBPAP49715 358 aaPredicted RBP30.15■■■□□ 2.42
CCDC61-205ENST00000596161 UNC13BO14795 1591 aa30.13■■■□□ 2.41
CCDC61-205ENST00000596161 VWDEQ8N2E2 1590 aa30.11■■■□□ 2.41
CCDC61-205ENST00000596161 CEP152O94986 1710 aa30.1■■■□□ 2.41
CCDC61-205ENST00000596161 NPATQ14207 1427 aa30.09■■■□□ 2.41
CCDC61-205ENST00000596161 LMTK2Q8IWU2 1503 aa30.08■■■□□ 2.41
CCDC61-205ENST00000596161 PZPP20742 1482 aa30.08■■■□□ 2.41
CCDC61-205ENST00000596161 CAMSAP1Q5T5Y3 1602 aa30.07■■■□□ 2.4
CCDC61-205ENST00000596161 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
CCDC61-205ENST00000596161 NUP155O75694 1391 aa30.02■■■□□ 2.4
CCDC61-205ENST00000596161 IQGAP3Q86VI3 1631 aa30■■■□□ 2.39
CCDC61-205ENST00000596161 SETD1BQ9UPS6 1966 aaKnown RBP29.99■■■□□ 2.39
CCDC61-205ENST00000596161 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
CCDC61-205ENST00000596161 SETD5Q9C0A6 1442 aa29.98■■■□□ 2.39
CCDC61-205ENST00000596161 EFCAB6Q5THR3 1501 aa29.98■■■□□ 2.39
CCDC61-205ENST00000596161 TET3O43151 1660 aa29.98■■■□□ 2.39
CCDC61-205ENST00000596161 UHRF1BP1Q6BDS2 1440 aa29.97■■■□□ 2.39
CCDC61-205ENST00000596161 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
CCDC61-205ENST00000596161 TNRQ92752 1358 aa29.95■■■□□ 2.39
CCDC61-205ENST00000596161 FBXO31Q5XUX0 539 aaPredicted RBP29.95■■■□□ 2.39
CCDC61-205ENST00000596161 ERVK-7P63135 1459 aa29.93■■■□□ 2.38
CCDC61-205ENST00000596161 SPATA31D1Q6ZQQ2 1576 aa29.93■■■□□ 2.38
CCDC61-205ENST00000596161 TRIM52Q96A61 297 aa29.92■■■□□ 2.38
CCDC61-205ENST00000596161 RPRD2Q5VT52 1461 aaKnown RBP29.92■■■□□ 2.38
CCDC61-205ENST00000596161 LMTK3Q96Q04 1460 aa29.92■■■□□ 2.38
CCDC61-205ENST00000596161 MYO3AQ8NEV4 1616 aa29.89■■■□□ 2.37
CCDC61-205ENST00000596161 RAB3GAP2Q9H2M9 1393 aa29.87■■■□□ 2.37
CCDC61-205ENST00000596161 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
CCDC61-205ENST00000596161 NLRP1Q9C000 1473 aa29.85■■■□□ 2.37
CCDC61-205ENST00000596161 CFAP65Q6ZU64 1925 aaKnown RBP29.83■■■□□ 2.37
CCDC61-205ENST00000596161 E9PCH4 1651 aa29.83■■■□□ 2.37
CCDC61-205ENST00000596161 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
CCDC61-205ENST00000596161 CEP170BQ9Y4F5 1589 aaPredicted RBP29.81■■■□□ 2.36
CCDC61-205ENST00000596161 A2ML1A8K2U0 1454 aa29.81■■■□□ 2.36
CCDC61-205ENST00000596161 NOS1P29475 1434 aa29.81■■■□□ 2.36
CCDC61-205ENST00000596161 HRCP23327 699 aa29.79■■■□□ 2.36
CCDC61-205ENST00000596161 SLC4A1APQ9BWU0 796 aaKnown RBP29.79■■■□□ 2.36
CCDC61-205ENST00000596161 HSPA2P54652 639 aa29.76■■■□□ 2.35
CCDC61-205ENST00000596161 SYNMO15061 1565 aa29.75■■■□□ 2.35
CCDC61-205ENST00000596161 PKD2Q13563 968 aa29.73■■■□□ 2.35
CCDC61-205ENST00000596161 SLC52A1Q9NWF4 448 aa29.72■■■□□ 2.35
CCDC61-205ENST00000596161 UGGT1Q9NYU2 1555 aa29.71■■■□□ 2.35
CCDC61-205ENST00000596161 MPHOSPH9Q99550 1183 aa29.7■■■□□ 2.35
CCDC61-205ENST00000596161 PTPRTO14522 1441 aa29.68■■■□□ 2.34
CCDC61-205ENST00000596161 SPHKAPQ2M3C7 1700 aa29.68■■■□□ 2.34
CCDC61-205ENST00000596161 THEMISQ8N1K5 641 aaPredicted RBP29.67■■■□□ 2.34
CCDC61-205ENST00000596161 IDI1Q13907 227 aa29.66■■■□□ 2.34
CCDC61-205ENST00000596161 PIK3C2BO00750 1634 aa29.66■■■□□ 2.34
CCDC61-205ENST00000596161 PLA2R1Q13018 1463 aa29.65■■■□□ 2.34
CCDC61-205ENST00000596161 STAG3Q9UJ98 1225 aa29.64■■■□□ 2.34
CCDC61-205ENST00000596161 KDM5AP29375 1690 aaKnown RBP29.63■■■□□ 2.33
CCDC61-205ENST00000596161 UBR1Q8IWV7 1749 aa29.62■■■□□ 2.33
CCDC61-205ENST00000596161 TRPM2O94759 1503 aa29.62■■■□□ 2.33
CCDC61-205ENST00000596161 ADGRB3O60242 1522 aa29.61■■■□□ 2.33
CCDC61-205ENST00000596161 FOXD1Q16676 465 aa29.55■■■□□ 2.32
CCDC61-205ENST00000596161 STRCQ7RTU9 1775 aa29.54■■■□□ 2.32
CCDC61-205ENST00000596161 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
CCDC61-205ENST00000596161 ANKLE2Q86XL3 938 aa29.53■■■□□ 2.32
CCDC61-205ENST00000596161 DMRT2Q9Y5R5 561 aa29.53■■■□□ 2.32
CCDC61-205ENST00000596161 SLIT1O75093 1534 aa29.52■■■□□ 2.32
CCDC61-205ENST00000596161 TMEM131LA2VDJ0 1609 aa29.52■■■□□ 2.32
CCDC61-205ENST00000596161 CLTCL1P53675 1640 aa29.52■■■□□ 2.32
CCDC61-205ENST00000596161 ARHGAP23Q9P227 1491 aa29.51■■■□□ 2.31
CCDC61-205ENST00000596161 NCKAP5LQ9HCH0 1330 aa29.5■■■□□ 2.31
CCDC61-205ENST00000596161 TMEM2Q9UHN6 1383 aa29.5■■■□□ 2.31
CCDC61-205ENST00000596161 POLR1AO95602 1720 aaPredicted RBP29.49■■■□□ 2.31
CCDC61-205ENST00000596161 CCDC144AA2RUR9 1427 aa29.48■■■□□ 2.31
CCDC61-205ENST00000596161 EID1Q9Y6B2 187 aa29.47■■■□□ 2.31
CCDC61-205ENST00000596161 SCAF11Q99590 1463 aaKnown RBP29.45■■■□□ 2.31
CCDC61-205ENST00000596161 KIF1BO60333 1816 aa29.44■■■□□ 2.3
CCDC61-205ENST00000596161 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
CCDC61-205ENST00000596161 HDGFP51858 240 aaKnown RBP29.43■■■□□ 2.3
CCDC61-205ENST00000596161 TXNDC2Q86VQ3 553 aa29.43■■■□□ 2.3
CCDC61-205ENST00000596161 NEURL4Q96JN8 1562 aa29.42■■■□□ 2.3
CCDC61-205ENST00000596161 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
CCDC61-205ENST00000596161 MED14O60244 1454 aa29.41■■■□□ 2.3
CCDC61-205ENST00000596161 RIMS2Q9UQ26 1411 aa29.4■■■□□ 2.3
CCDC61-205ENST00000596161 ANKRD30BQ9BXX2 1392 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms