RNA–Protein interactions for RNA: ENST00000595476.1

SAMD4B-203, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 3

Gene SAMD4B, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-203ENST00000595476 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.71
SAMD4B-203ENST00000595476 ESF1Q9H501 851 aaKnown RBP25.69■■□□□ 1.7
SAMD4B-203ENST00000595476 CNTLNQ9NXG0 1405 aa25.68■■□□□ 1.7
SAMD4B-203ENST00000595476 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
SAMD4B-203ENST00000595476 CLTCQ00610 1675 aaKnown RBP25.66■■□□□ 1.7
SAMD4B-203ENST00000595476 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
SAMD4B-203ENST00000595476 MROH2AA6NES4 1674 aa25.64■■□□□ 1.7
SAMD4B-203ENST00000595476 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
SAMD4B-203ENST00000595476 CEBPAP49715 358 aaPredicted RBP25.63■■□□□ 1.69
SAMD4B-203ENST00000595476 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
SAMD4B-203ENST00000595476 C3P01024 1663 aa25.62■■□□□ 1.69
SAMD4B-203ENST00000595476 ZMYM3Q14202 1370 aa25.61■■□□□ 1.69
SAMD4B-203ENST00000595476 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
SAMD4B-203ENST00000595476 KDM5DQ9BY66 1539 aa25.6■■□□□ 1.69
SAMD4B-203ENST00000595476 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
SAMD4B-203ENST00000595476 PRDM15P57071 1507 aaPredicted RBP25.59■■□□□ 1.69
SAMD4B-203ENST00000595476 NAIPQ13075 1403 aa25.56■■□□□ 1.68
SAMD4B-203ENST00000595476 ZC3H13Q5T200 1668 aaKnown RBP25.56■■□□□ 1.68
SAMD4B-203ENST00000595476 ABCC3O15438 1527 aa25.56■■□□□ 1.68
SAMD4B-203ENST00000595476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.55■■□□□ 1.68
SAMD4B-203ENST00000595476 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
SAMD4B-203ENST00000595476 CEP152O94986 1710 aa25.54■■□□□ 1.68
SAMD4B-203ENST00000595476 HFM1A2PYH4 1435 aa25.54■■□□□ 1.68
SAMD4B-203ENST00000595476 VWDEQ8N2E2 1590 aa25.53■■□□□ 1.68
SAMD4B-203ENST00000595476 KANK1Q14678 1352 aa25.52■■□□□ 1.68
SAMD4B-203ENST00000595476 UNC13BO14795 1591 aa25.51■■□□□ 1.67
SAMD4B-203ENST00000595476 SETD1BQ9UPS6 1966 aaKnown RBP25.49■■□□□ 1.67
SAMD4B-203ENST00000595476 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
SAMD4B-203ENST00000595476 NPATQ14207 1427 aa25.48■■□□□ 1.67
SAMD4B-203ENST00000595476 LMTK2Q8IWU2 1503 aa25.47■■□□□ 1.67
SAMD4B-203ENST00000595476 PZPP20742 1482 aa25.47■■□□□ 1.67
SAMD4B-203ENST00000595476 FBXO31Q5XUX0 539 aaPredicted RBP25.44■■□□□ 1.66
SAMD4B-203ENST00000595476 ARHGAP31Q2M1Z3 1444 aa25.44■■□□□ 1.66
SAMD4B-203ENST00000595476 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
SAMD4B-203ENST00000595476 NUP155O75694 1391 aa25.41■■□□□ 1.66
SAMD4B-203ENST00000595476 IQGAP3Q86VI3 1631 aa25.41■■□□□ 1.66
SAMD4B-203ENST00000595476 LMTK3Q96Q04 1460 aa25.4■■□□□ 1.66
SAMD4B-203ENST00000595476 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.65
SAMD4B-203ENST00000595476 TET3O43151 1660 aa25.38■■□□□ 1.65
SAMD4B-203ENST00000595476 EFCAB6Q5THR3 1501 aa25.37■■□□□ 1.65
SAMD4B-203ENST00000595476 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
SAMD4B-203ENST00000595476 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
SAMD4B-203ENST00000595476 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
SAMD4B-203ENST00000595476 ERVK-7P63135 1459 aa25.35■■□□□ 1.65
SAMD4B-203ENST00000595476 TNRQ92752 1358 aa25.35■■□□□ 1.65
SAMD4B-203ENST00000595476 MYO3AQ8NEV4 1616 aa25.34■■□□□ 1.65
SAMD4B-203ENST00000595476 RPRD2Q5VT52 1461 aaKnown RBP25.31■■□□□ 1.64
SAMD4B-203ENST00000595476 E9PCH4 1651 aa25.3■■□□□ 1.64
SAMD4B-203ENST00000595476 TRIM52Q96A61 297 aa25.3■■□□□ 1.64
SAMD4B-203ENST00000595476 HSPA2P54652 639 aa25.28■■□□□ 1.64
SAMD4B-203ENST00000595476 ZNF142P52746 1687 aaPredicted RBP25.28■■□□□ 1.64
SAMD4B-203ENST00000595476 NOS1P29475 1434 aa25.27■■□□□ 1.64
SAMD4B-203ENST00000595476 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
SAMD4B-203ENST00000595476 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
SAMD4B-203ENST00000595476 A2ML1A8K2U0 1454 aa25.26■■□□□ 1.63
SAMD4B-203ENST00000595476 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
SAMD4B-203ENST00000595476 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
SAMD4B-203ENST00000595476 SYNMO15061 1565 aa25.23■■□□□ 1.63
SAMD4B-203ENST00000595476 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
SAMD4B-203ENST00000595476 HRCP23327 699 aa25.21■■□□□ 1.63
SAMD4B-203ENST00000595476 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
SAMD4B-203ENST00000595476 IDI1Q13907 227 aa25.18■■□□□ 1.62
SAMD4B-203ENST00000595476 PKD2Q13563 968 aa25.17■■□□□ 1.62
SAMD4B-203ENST00000595476 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
SAMD4B-203ENST00000595476 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
SAMD4B-203ENST00000595476 MPHOSPH9Q99550 1183 aa25.16■■□□□ 1.62
SAMD4B-203ENST00000595476 PTPRTO14522 1441 aa25.15■■□□□ 1.62
SAMD4B-203ENST00000595476 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
SAMD4B-203ENST00000595476 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
SAMD4B-203ENST00000595476 STRCQ7RTU9 1775 aa25.14■■□□□ 1.62
SAMD4B-203ENST00000595476 THEMISQ8N1K5 641 aaPredicted RBP25.14■■□□□ 1.62
SAMD4B-203ENST00000595476 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.61
SAMD4B-203ENST00000595476 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
SAMD4B-203ENST00000595476 PLA2R1Q13018 1463 aa25.11■■□□□ 1.61
SAMD4B-203ENST00000595476 FOXD1Q16676 465 aa25.07■■□□□ 1.6
SAMD4B-203ENST00000595476 TRPM2O94759 1503 aa25.07■■□□□ 1.6
SAMD4B-203ENST00000595476 ADGRB3O60242 1522 aa25.06■■□□□ 1.6
SAMD4B-203ENST00000595476 STAG3Q9UJ98 1225 aa25.05■■□□□ 1.6
SAMD4B-203ENST00000595476 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
SAMD4B-203ENST00000595476 TMEM131LA2VDJ0 1609 aa25.04■■□□□ 1.6
SAMD4B-203ENST00000595476 MYO5BQ9ULV0 1848 aa25.02■■□□□ 1.6
SAMD4B-203ENST00000595476 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
SAMD4B-203ENST00000595476 SLIT1O75093 1534 aa25.02■■□□□ 1.6
SAMD4B-203ENST00000595476 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
SAMD4B-203ENST00000595476 ANKLE2Q86XL3 938 aa25.01■■□□□ 1.59
SAMD4B-203ENST00000595476 DMRT2Q9Y5R5 561 aa25.01■■□□□ 1.59
SAMD4B-203ENST00000595476 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
SAMD4B-203ENST00000595476 TMEM2Q9UHN6 1383 aa25■■□□□ 1.59
SAMD4B-203ENST00000595476 CHGAP10645 457 aaKnown RBP24.98■■□□□ 1.59
SAMD4B-203ENST00000595476 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
SAMD4B-203ENST00000595476 LTKP29376 864 aa24.95■■□□□ 1.58
SAMD4B-203ENST00000595476 TXNDC2Q86VQ3 553 aa24.95■■□□□ 1.58
SAMD4B-203ENST00000595476 KIF1BO60333 1816 aa24.95■■□□□ 1.58
SAMD4B-203ENST00000595476 MED14O60244 1454 aa24.95■■□□□ 1.58
SAMD4B-203ENST00000595476 EID1Q9Y6B2 187 aa24.93■■□□□ 1.58
SAMD4B-203ENST00000595476 SCAF11Q99590 1463 aaKnown RBP24.92■■□□□ 1.58
SAMD4B-203ENST00000595476 CCDC144AA2RUR9 1427 aa24.91■■□□□ 1.58
SAMD4B-203ENST00000595476 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
SAMD4B-203ENST00000595476 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
SAMD4B-203ENST00000595476 NPHP4O75161 1426 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms