RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RNF17Q9BXT8 1623 aaKnown RBP34.7■■■■□ 3.15
PNKP-205ENST00000595081 PLPPR3Q6T4P5 718 aa34.7■■■■□ 3.15
PNKP-205ENST00000595081 ANKRD50Q9ULJ7 1429 aa34.69■■■■□ 3.14
PNKP-205ENST00000595081 CNTLNQ9NXG0 1405 aa34.66■■■■□ 3.14
PNKP-205ENST00000595081 MROH1Q8NDA8 1641 aa34.66■■■■□ 3.14
PNKP-205ENST00000595081 PPP6R1Q9UPN7 881 aa34.65■■■■□ 3.14
PNKP-205ENST00000595081 CLTCQ00610 1675 aaKnown RBP34.64■■■■□ 3.14
PNKP-205ENST00000595081 CEBPAP49715 358 aaPredicted RBP34.63■■■■□ 3.13
PNKP-205ENST00000595081 KDM5DQ9BY66 1539 aa34.6■■■■□ 3.13
PNKP-205ENST00000595081 WASHC2CQ9Y4E1 1318 aa34.6■■■■□ 3.13
PNKP-205ENST00000595081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.6■■■■□ 3.131e-7■■■■□ 24.4
PNKP-205ENST00000595081 DEPDC5O75140 1603 aa34.59■■■■□ 3.13
PNKP-205ENST00000595081 PRDM15P57071 1507 aaPredicted RBP34.58■■■■□ 3.13
PNKP-205ENST00000595081 ZMYM3Q14202 1370 aa34.58■■■■□ 3.13
PNKP-205ENST00000595081 MROH2AA6NES4 1674 aa34.57■■■■□ 3.12
PNKP-205ENST00000595081 C3P01024 1663 aa34.57■■■■□ 3.12
PNKP-205ENST00000595081 NAIPQ13075 1403 aa34.56■■■■□ 3.12
PNKP-205ENST00000595081 FAM135AQ9P2D6 1515 aa34.56■■■■□ 3.12
PNKP-205ENST00000595081 ABCC3O15438 1527 aa34.55■■■■□ 3.12
PNKP-205ENST00000595081 HFM1A2PYH4 1435 aa34.52■■■■□ 3.12
PNKP-205ENST00000595081 GCC2Q8IWJ2 1684 aa34.5■■■■□ 3.11
PNKP-205ENST00000595081 KANK1Q14678 1352 aa34.49■■■■□ 3.11
PNKP-205ENST00000595081 ZC3H13Q5T200 1668 aaKnown RBP34.49■■■■□ 3.11
PNKP-205ENST00000595081 CEP152O94986 1710 aa34.49■■■■□ 3.11
PNKP-205ENST00000595081 UNC13BO14795 1591 aa34.46■■■■□ 3.11
PNKP-205ENST00000595081 VWDEQ8N2E2 1590 aa34.45■■■■□ 3.11
PNKP-205ENST00000595081 CAMSAP1Q5T5Y3 1602 aa34.41■■■■□ 3.1
PNKP-205ENST00000595081 PZPP20742 1482 aa34.4■■■■□ 3.1
PNKP-205ENST00000595081 FBXO31Q5XUX0 539 aaPredicted RBP34.39■■■■□ 3.1
PNKP-205ENST00000595081 LMTK2Q8IWU2 1503 aa34.39■■■■□ 3.1
PNKP-205ENST00000595081 NPATQ14207 1427 aa34.38■■■■□ 3.09
PNKP-205ENST00000595081 NUP155O75694 1391 aa34.36■■■■□ 3.09
PNKP-205ENST00000595081 ARHGAP31Q2M1Z3 1444 aa34.31■■■■□ 3.08
PNKP-205ENST00000595081 IQGAP3Q86VI3 1631 aa34.31■■■■□ 3.08
PNKP-205ENST00000595081 LMTK3Q96Q04 1460 aa34.3■■■■□ 3.08
PNKP-205ENST00000595081 EFCAB6Q5THR3 1501 aa34.3■■■■□ 3.08
PNKP-205ENST00000595081 PREX1Q8TCU6 1659 aa34.29■■■■□ 3.08
PNKP-205ENST00000595081 SETD5Q9C0A6 1442 aa34.29■■■■□ 3.08
PNKP-205ENST00000595081 SETD1BQ9UPS6 1966 aaKnown RBP34.28■■■■□ 3.08
PNKP-205ENST00000595081 TET3O43151 1660 aa34.27■■■■□ 3.08
PNKP-205ENST00000595081 UHRF1BP1Q6BDS2 1440 aa34.27■■■■□ 3.08
PNKP-205ENST00000595081 ERVK-7P63135 1459 aa34.27■■■■□ 3.08
PNKP-205ENST00000595081 TNRQ92752 1358 aa34.26■■■■□ 3.08
PNKP-205ENST00000595081 TRIM52Q96A61 297 aa34.25■■■■□ 3.07
PNKP-205ENST00000595081 SPATA31D1Q6ZQQ2 1576 aa34.23■■■■□ 3.07
PNKP-205ENST00000595081 CFAP65Q6ZU64 1925 aaKnown RBP34.23■■■■□ 3.07
PNKP-205ENST00000595081 MYO3AQ8NEV4 1616 aa34.22■■■■□ 3.07
PNKP-205ENST00000595081 RAB3GAP2Q9H2M9 1393 aa34.2■■■■□ 3.07
PNKP-205ENST00000595081 HSPA2P54652 639 aa34.18■■■■□ 3.06
PNKP-205ENST00000595081 E9PCH4 1651 aa34.16■■■■□ 3.06
PNKP-205ENST00000595081 RPRD2Q5VT52 1461 aaKnown RBP34.16■■■■□ 3.06
PNKP-205ENST00000595081 TRIM26Q12899 539 aaPredicted RBP34.14■■■■□ 3.06
PNKP-205ENST00000595081 CEP170BQ9Y4F5 1589 aaPredicted RBP34.13■■■■□ 3.05
PNKP-205ENST00000595081 NOS1P29475 1434 aa34.13■■■■□ 3.05
PNKP-205ENST00000595081 ZNF142P52746 1687 aaPredicted RBP34.1■■■■□ 3.05
PNKP-205ENST00000595081 A2ML1A8K2U0 1454 aa34.1■■■■□ 3.05
PNKP-205ENST00000595081 NLRP1Q9C000 1473 aa34.1■■■■□ 3.05
PNKP-205ENST00000595081 SYNMO15061 1565 aa34.1■■■■□ 3.05
PNKP-205ENST00000595081 SLC4A1APQ9BWU0 796 aaKnown RBP34.09■■■■□ 3.05
PNKP-205ENST00000595081 PKD2Q13563 968 aa34.05■■■■□ 3.04
PNKP-205ENST00000595081 ACIN1Q9UKV3 1341 aaKnown RBP34.02■■■■□ 3.04
PNKP-205ENST00000595081 MPHOSPH9Q99550 1183 aa34.01■■■■□ 3.03
PNKP-205ENST00000595081 IDI1Q13907 227 aa34■■■■□ 3.03
PNKP-205ENST00000595081 UGGT1Q9NYU2 1555 aa33.99■■■■□ 3.03
PNKP-205ENST00000595081 HRCP23327 699 aa33.98■■■■□ 3.03
PNKP-205ENST00000595081 PIK3C2BO00750 1634 aa33.97■■■■□ 3.03
PNKP-205ENST00000595081 FOXD1Q16676 465 aa33.96■■■■□ 3.03
PNKP-205ENST00000595081 PTPRTO14522 1441 aa33.96■■■■□ 3.03
PNKP-205ENST00000595081 SLC52A1Q9NWF4 448 aa33.95■■■■□ 3.03
PNKP-205ENST00000595081 SPHKAPQ2M3C7 1700 aa33.95■■■■□ 3.03
PNKP-205ENST00000595081 UBR1Q8IWV7 1749 aa33.92■■■■□ 3.02
PNKP-205ENST00000595081 THEMISQ8N1K5 641 aaPredicted RBP33.91■■■■□ 3.02
PNKP-205ENST00000595081 PLA2R1Q13018 1463 aa33.9■■■■□ 3.02
PNKP-205ENST00000595081 STAG3Q9UJ98 1225 aa33.89■■■■□ 3.02
PNKP-205ENST00000595081 TRPM2O94759 1503 aa33.88■■■■□ 3.01
PNKP-205ENST00000595081 ADGRB3O60242 1522 aa33.87■■■■□ 3.01
PNKP-205ENST00000595081 STRCQ7RTU9 1775 aa33.87■■■■□ 3.01
PNKP-205ENST00000595081 NCKAP5LQ9HCH0 1330 aa33.84■■■■□ 3.01
PNKP-205ENST00000595081 CHGAP10645 457 aaKnown RBP33.82■■■■□ 3
PNKP-205ENST00000595081 CLTCL1P53675 1640 aa33.82■■■■□ 3
PNKP-205ENST00000595081 KDM5AP29375 1690 aaKnown RBP33.81■■■■□ 3
PNKP-205ENST00000595081 TMEM131LA2VDJ0 1609 aa33.79■■■■□ 3
PNKP-205ENST00000595081 TMEM2Q9UHN6 1383 aa33.77■■■■□ 3
PNKP-205ENST00000595081 ANKLE2Q86XL3 938 aa33.77■■■■□ 3
PNKP-205ENST00000595081 ARHGAP23Q9P227 1491 aa33.76■■■■□ 3
PNKP-205ENST00000595081 SLIT1O75093 1534 aa33.76■■■■□ 3
PNKP-205ENST00000595081 MYO5BQ9ULV0 1848 aa33.76■■■□□ 2.99
PNKP-205ENST00000595081 PCGF6Q9BYE7 350 aa33.73■■■□□ 2.99
PNKP-205ENST00000595081 POLR1AO95602 1720 aaPredicted RBP33.72■■■□□ 2.99
PNKP-205ENST00000595081 NEURL4Q96JN8 1562 aa33.72■■■□□ 2.99
PNKP-205ENST00000595081 LTKP29376 864 aa33.71■■■□□ 2.99
PNKP-205ENST00000595081 TXNDC2Q86VQ3 553 aa33.7■■■□□ 2.99
PNKP-205ENST00000595081 CCDC144AA2RUR9 1427 aa33.7■■■□□ 2.98
PNKP-205ENST00000595081 SCAF11Q99590 1463 aaKnown RBP33.69■■■□□ 2.98
PNKP-205ENST00000595081 DMRT2Q9Y5R5 561 aa33.69■■■□□ 2.98
PNKP-205ENST00000595081 EID1Q9Y6B2 187 aa33.67■■■□□ 2.98
PNKP-205ENST00000595081 RIMS2Q9UQ26 1411 aa33.66■■■□□ 2.98
PNKP-205ENST00000595081 ZFYVE9O95405 1425 aa33.65■■■□□ 2.98
PNKP-205ENST00000595081 ANKRD30BQ9BXX2 1392 aa33.65■■■□□ 2.98
PNKP-205ENST00000595081 KIF1BO60333 1816 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms