RNA–Protein interactions for RNA: ENST00000594258.1

ARHGEF1-207, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-207ENST00000594258 EIF2AK4Q9P2K8 1649 aaKnown RBP30.69■■■□□ 2.5
ARHGEF1-207ENST00000594258 RNF17Q9BXT8 1623 aaKnown RBP30.68■■■□□ 2.5
ARHGEF1-207ENST00000594258 DAPK1P53355 1430 aa30.66■■■□□ 2.5
ARHGEF1-207ENST00000594258 STRCQ7RTU9 1775 aa30.64■■■□□ 2.5
ARHGEF1-207ENST00000594258 DUOX2Q9NRD8 1548 aa30.64■■■□□ 2.5
ARHGEF1-207ENST00000594258 MYO3AQ8NEV4 1616 aa30.64■■■□□ 2.5
ARHGEF1-207ENST00000594258 ZNF142P52746 1687 aaPredicted RBP30.62■■■□□ 2.49
ARHGEF1-207ENST00000594258 PZPP20742 1482 aa30.59■■■□□ 2.49
ARHGEF1-207ENST00000594258 MROH1Q8NDA8 1641 aa30.58■■■□□ 2.49
ARHGEF1-207ENST00000594258 KIF15Q9NS87 1388 aa30.58■■■□□ 2.49
ARHGEF1-207ENST00000594258 WASHC2CQ9Y4E1 1318 aa30.58■■■□□ 2.49
ARHGEF1-207ENST00000594258 ZC3H13Q5T200 1668 aaKnown RBP30.58■■■□□ 2.49
ARHGEF1-207ENST00000594258 CEP170BQ9Y4F5 1589 aaPredicted RBP30.57■■■□□ 2.48
ARHGEF1-207ENST00000594258 ERBINQ96RT1 1412 aa30.56■■■□□ 2.48
ARHGEF1-207ENST00000594258 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
ARHGEF1-207ENST00000594258 NCOA1Q15788 1441 aa30.55■■■□□ 2.48
ARHGEF1-207ENST00000594258 ABCC3O15438 1527 aa30.54■■■□□ 2.48
ARHGEF1-207ENST00000594258 CAMSAP1Q5T5Y3 1602 aa30.52■■■□□ 2.48
ARHGEF1-207ENST00000594258 DMRT2Q9Y5R5 561 aa30.52■■■□□ 2.48
ARHGEF1-207ENST00000594258 PTPRTO14522 1441 aa30.5■■■□□ 2.47
ARHGEF1-207ENST00000594258 PRDM15P57071 1507 aaPredicted RBP30.5■■■□□ 2.47
ARHGEF1-207ENST00000594258 RRP7BPQ9NSQ0 103 aa30.49■■■□□ 2.47
ARHGEF1-207ENST00000594258 ANKRD30AQ9BXX3 1397 aa30.49■■■□□ 2.47
ARHGEF1-207ENST00000594258 A2ML1A8K2U0 1454 aa30.49■■■□□ 2.47
ARHGEF1-207ENST00000594258 TNRQ92752 1358 aa30.48■■■□□ 2.47
ARHGEF1-207ENST00000594258 ADGRL2O95490 1459 aa30.48■■■□□ 2.47
ARHGEF1-207ENST00000594258 PLA2R1Q13018 1463 aa30.47■■■□□ 2.47
ARHGEF1-207ENST00000594258 FBXO31Q5XUX0 539 aaPredicted RBP30.47■■■□□ 2.47
ARHGEF1-207ENST00000594258 DEPDC5O75140 1603 aa30.46■■■□□ 2.47
ARHGEF1-207ENST00000594258 FAM50AQ14320 339 aaKnown RBP30.45■■■□□ 2.47
ARHGEF1-207ENST00000594258 CEP152O94986 1710 aa30.44■■■□□ 2.46
ARHGEF1-207ENST00000594258 CHIC2Q9UKJ5 165 aa30.43■■■□□ 2.46
ARHGEF1-207ENST00000594258 SPATA31D1Q6ZQQ2 1576 aa30.41■■■□□ 2.46
ARHGEF1-207ENST00000594258 NLRP1Q9C000 1473 aa30.4■■■□□ 2.46
ARHGEF1-207ENST00000594258 FBXO41Q8TF61 875 aa30.39■■■□□ 2.46
ARHGEF1-207ENST00000594258 ERVK-7P63135 1459 aa30.37■■■□□ 2.45
ARHGEF1-207ENST00000594258 ARHGAP31Q2M1Z3 1444 aa30.35■■■□□ 2.45
ARHGEF1-207ENST00000594258 PKD2Q13563 968 aa30.34■■■□□ 2.45
ARHGEF1-207ENST00000594258 VWDEQ8N2E2 1590 aa30.33■■■□□ 2.45
ARHGEF1-207ENST00000594258 NCKAP5LQ9HCH0 1330 aa30.33■■■□□ 2.45
ARHGEF1-207ENST00000594258 CERKQ8TCT0 537 aa30.33■■■□□ 2.45
ARHGEF1-207ENST00000594258 LMTK2Q8IWU2 1503 aa30.32■■■□□ 2.44
ARHGEF1-207ENST00000594258 KANK1Q14678 1352 aa30.31■■■□□ 2.44
ARHGEF1-207ENST00000594258 UGGT1Q9NYU2 1555 aa30.3■■■□□ 2.44
ARHGEF1-207ENST00000594258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.29■■■□□ 2.44
ARHGEF1-207ENST00000594258 ANKRD50Q9ULJ7 1429 aa30.29■■■□□ 2.44
ARHGEF1-207ENST00000594258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.28■■■□□ 2.449e-7■■□□□ 13.6
ARHGEF1-207ENST00000594258 PPARGC1BQ86YN6 1023 aaKnown RBP30.27■■■□□ 2.44
ARHGEF1-207ENST00000594258 POLR1AO95602 1720 aaPredicted RBP30.27■■■□□ 2.44
ARHGEF1-207ENST00000594258 LTBP4Q8N2S1 1624 aa30.26■■■□□ 2.44
ARHGEF1-207ENST00000594258 ROCK1Q13464 1354 aa30.26■■■□□ 2.43
ARHGEF1-207ENST00000594258 NEURL4Q96JN8 1562 aa30.24■■■□□ 2.43
ARHGEF1-207ENST00000594258 THEMISQ8N1K5 641 aaPredicted RBP30.23■■■□□ 2.43
ARHGEF1-207ENST00000594258 EFCAB6Q5THR3 1501 aa30.2■■■□□ 2.42
ARHGEF1-207ENST00000594258 CFAP65Q6ZU64 1925 aaKnown RBP30.2■■■□□ 2.42
ARHGEF1-207ENST00000594258 UBR1Q8IWV7 1749 aa30.17■■■□□ 2.42
ARHGEF1-207ENST00000594258 UNC13BO14795 1591 aa30.17■■■□□ 2.42
ARHGEF1-207ENST00000594258 RRBP1Q9P2E9 1410 aaKnown RBP30.16■■■□□ 2.42
ARHGEF1-207ENST00000594258 ANKLE2Q86XL3 938 aa30.15■■■□□ 2.42
ARHGEF1-207ENST00000594258 MED14O60244 1454 aa30.14■■■□□ 2.42
ARHGEF1-207ENST00000594258 IQSEC2Q5JU85 1478 aa30.13■■■□□ 2.41
ARHGEF1-207ENST00000594258 ZNF335Q9H4Z2 1342 aaPredicted RBP30.13■■■□□ 2.41
ARHGEF1-207ENST00000594258 NOS1P29475 1434 aa30.11■■■□□ 2.41
ARHGEF1-207ENST00000594258 RPRD2Q5VT52 1461 aaKnown RBP30.11■■■□□ 2.41
ARHGEF1-207ENST00000594258 SYNMO15061 1565 aa30.11■■■□□ 2.41
ARHGEF1-207ENST00000594258 TET3O43151 1660 aa30.11■■■□□ 2.41
ARHGEF1-207ENST00000594258 PIK3C2BO00750 1634 aa30.1■■■□□ 2.41
ARHGEF1-207ENST00000594258 NPHP4O75161 1426 aaPredicted RBP30.08■■■□□ 2.41
ARHGEF1-207ENST00000594258 ITGAEP38570 1179 aa30.08■■■□□ 2.41
ARHGEF1-207ENST00000594258 KDM5AP29375 1690 aaKnown RBP30.07■■■□□ 2.41
ARHGEF1-207ENST00000594258 SLIT1O75093 1534 aa30.07■■■□□ 2.4
ARHGEF1-207ENST00000594258 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
ARHGEF1-207ENST00000594258 IQGAP1P46940 1657 aa30.06■■■□□ 2.4
ARHGEF1-207ENST00000594258 GCC2Q8IWJ2 1684 aa30.06■■■□□ 2.4
ARHGEF1-207ENST00000594258 IQGAP3Q86VI3 1631 aa30.04■■■□□ 2.4
ARHGEF1-207ENST00000594258 SCAF11Q99590 1463 aaKnown RBP30.02■■■□□ 2.4
ARHGEF1-207ENST00000594258 IDI1Q13907 227 aa29.99■■■□□ 2.39
ARHGEF1-207ENST00000594258 ADGRB3O60242 1522 aa29.98■■■□□ 2.39
ARHGEF1-207ENST00000594258 CPS1P31327 1500 aa29.97■■■□□ 2.39
ARHGEF1-207ENST00000594258 TMEM2Q9UHN6 1383 aa29.97■■■□□ 2.39
ARHGEF1-207ENST00000594258 E9PCH4 1651 aa29.97■■■□□ 2.39
ARHGEF1-207ENST00000594258 SLC52A1Q9NWF4 448 aa29.95■■■□□ 2.39
ARHGEF1-207ENST00000594258 STAG3Q9UJ98 1225 aa29.94■■■□□ 2.38
ARHGEF1-207ENST00000594258 NUP155O75694 1391 aa29.93■■■□□ 2.38
ARHGEF1-207ENST00000594258 LTKP29376 864 aa29.93■■■□□ 2.38
ARHGEF1-207ENST00000594258 TXNDC2Q86VQ3 553 aa29.92■■■□□ 2.38
ARHGEF1-207ENST00000594258 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
ARHGEF1-207ENST00000594258 NAIPQ13075 1403 aa29.89■■■□□ 2.38
ARHGEF1-207ENST00000594258 HFM1A2PYH4 1435 aa29.84■■■□□ 2.37
ARHGEF1-207ENST00000594258 TMEM131LA2VDJ0 1609 aa29.84■■■□□ 2.37
ARHGEF1-207ENST00000594258 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
ARHGEF1-207ENST00000594258 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
ARHGEF1-207ENST00000594258 ZFYVE9O95405 1425 aa29.79■■■□□ 2.36
ARHGEF1-207ENST00000594258 UBAP1LF5GYI3 381 aa29.77■■■□□ 2.36
ARHGEF1-207ENST00000594258 SPHKAPQ2M3C7 1700 aa29.76■■■□□ 2.35
ARHGEF1-207ENST00000594258 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.35
ARHGEF1-207ENST00000594258 RIMS2Q9UQ26 1411 aa29.73■■■□□ 2.35
ARHGEF1-207ENST00000594258 PLEKHG1Q9ULL1 1385 aa29.69■■■□□ 2.34
ARHGEF1-207ENST00000594258 CHGAP10645 457 aaKnown RBP29.67■■■□□ 2.34
ARHGEF1-207ENST00000594258 HDGFP51858 240 aaKnown RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms