RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 MYOM3Q5VTT5 1437 aa24.63■■□□□ 1.53
USHBP1-204ENST00000594190 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
USHBP1-204ENST00000594190 CEP170BQ9Y4F5 1589 aaPredicted RBP24.62■■□□□ 1.53
USHBP1-204ENST00000594190 RNF17Q9BXT8 1623 aaKnown RBP24.61■■□□□ 1.53
USHBP1-204ENST00000594190 KDM5DQ9BY66 1539 aa24.6■■□□□ 1.53
USHBP1-204ENST00000594190 LTBP4Q8N2S1 1624 aa24.58■■□□□ 1.53
USHBP1-204ENST00000594190 CROCC2H7BZ55 1655 aa24.57■■□□□ 1.52
USHBP1-204ENST00000594190 ILDR2Q71H61 639 aa24.57■■□□□ 1.52
USHBP1-204ENST00000594190 PLA2R1Q13018 1463 aa24.57■■□□□ 1.52
USHBP1-204ENST00000594190 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
USHBP1-204ENST00000594190 MROH1Q8NDA8 1641 aa24.56■■□□□ 1.52
USHBP1-204ENST00000594190 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
USHBP1-204ENST00000594190 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
USHBP1-204ENST00000594190 PZPP20742 1482 aa24.55■■□□□ 1.52
USHBP1-204ENST00000594190 TCOF1Q13428 1488 aaKnown RBP24.55■■□□□ 1.52
USHBP1-204ENST00000594190 KIF3BO15066 747 aa24.54■■□□□ 1.52
USHBP1-204ENST00000594190 SOCS7O14512 581 aa24.53■■□□□ 1.52
USHBP1-204ENST00000594190 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
USHBP1-204ENST00000594190 ZC3H13Q5T200 1668 aaKnown RBP24.52■■□□□ 1.52
USHBP1-204ENST00000594190 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
USHBP1-204ENST00000594190 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
USHBP1-204ENST00000594190 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
USHBP1-204ENST00000594190 SHANK2Q9UPX8 1470 aa24.48■■□□□ 1.51
USHBP1-204ENST00000594190 ABCC3O15438 1527 aa24.47■■□□□ 1.51
USHBP1-204ENST00000594190 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
USHBP1-204ENST00000594190 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
USHBP1-204ENST00000594190 IQSEC2Q5JU85 1478 aa24.46■■□□□ 1.51
USHBP1-204ENST00000594190 ABCC5O15440 1437 aa24.46■■□□□ 1.51
USHBP1-204ENST00000594190 FBXO31Q5XUX0 539 aaPredicted RBP24.46■■□□□ 1.51
USHBP1-204ENST00000594190 DUOX2Q9NRD8 1548 aa24.45■■□□□ 1.51
USHBP1-204ENST00000594190 POLR1AO95602 1720 aaPredicted RBP24.45■■□□□ 1.5
USHBP1-204ENST00000594190 CEP152O94986 1710 aa24.44■■□□□ 1.5
USHBP1-204ENST00000594190 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
USHBP1-204ENST00000594190 TNRQ92752 1358 aa24.43■■□□□ 1.5
USHBP1-204ENST00000594190 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
USHBP1-204ENST00000594190 FGD6Q6ZV73 1430 aa24.43■■□□□ 1.5
USHBP1-204ENST00000594190 WASHC2CQ9Y4E1 1318 aa24.42■■□□□ 1.5
USHBP1-204ENST00000594190 PKD2Q13563 968 aa24.41■■□□□ 1.5
USHBP1-204ENST00000594190 DEPDC5O75140 1603 aa24.41■■□□□ 1.5
USHBP1-204ENST00000594190 PRDM15P57071 1507 aaPredicted RBP24.4■■□□□ 1.5
USHBP1-204ENST00000594190 DAPK1P53355 1430 aa24.4■■□□□ 1.5
USHBP1-204ENST00000594190 NLRP1Q9C000 1473 aa24.38■■□□□ 1.49
USHBP1-204ENST00000594190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.37■■□□□ 1.49
USHBP1-204ENST00000594190 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
USHBP1-204ENST00000594190 CFAP65Q6ZU64 1925 aaKnown RBP24.36■■□□□ 1.49
USHBP1-204ENST00000594190 ERVK-7P63135 1459 aa24.35■■□□□ 1.49
USHBP1-204ENST00000594190 KIF15Q9NS87 1388 aa24.35■■□□□ 1.49
USHBP1-204ENST00000594190 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
USHBP1-204ENST00000594190 ZNF335Q9H4Z2 1342 aaPredicted RBP24.33■■□□□ 1.48
USHBP1-204ENST00000594190 VWDEQ8N2E2 1590 aa24.32■■□□□ 1.48
USHBP1-204ENST00000594190 ARHGAP31Q2M1Z3 1444 aa24.31■■□□□ 1.48
USHBP1-204ENST00000594190 MED14O60244 1454 aa24.31■■□□□ 1.48
USHBP1-204ENST00000594190 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
USHBP1-204ENST00000594190 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
USHBP1-204ENST00000594190 ADGRL2O95490 1459 aa24.29■■□□□ 1.48
USHBP1-204ENST00000594190 LMTK2Q8IWU2 1503 aa24.26■■□□□ 1.47
USHBP1-204ENST00000594190 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
USHBP1-204ENST00000594190 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
USHBP1-204ENST00000594190 THEMISQ8N1K5 641 aaPredicted RBP24.22■■□□□ 1.47
USHBP1-204ENST00000594190 ANKRD30AQ9BXX3 1397 aa24.21■■□□□ 1.47
USHBP1-204ENST00000594190 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
USHBP1-204ENST00000594190 ARHGAP23Q9P227 1491 aa24.19■■□□□ 1.46
USHBP1-204ENST00000594190 KDM5AP29375 1690 aaKnown RBP24.18■■□□□ 1.46
USHBP1-204ENST00000594190 ANKLE2Q86XL3 938 aa24.18■■□□□ 1.46
USHBP1-204ENST00000594190 SLIT1O75093 1534 aa24.18■■□□□ 1.46
USHBP1-204ENST00000594190 CPS1P31327 1500 aa24.18■■□□□ 1.46
USHBP1-204ENST00000594190 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
USHBP1-204ENST00000594190 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
USHBP1-204ENST00000594190 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
USHBP1-204ENST00000594190 CHIC2Q9UKJ5 165 aa24.16■■□□□ 1.46
USHBP1-204ENST00000594190 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
USHBP1-204ENST00000594190 SYNMO15061 1565 aa24.15■■□□□ 1.46
USHBP1-204ENST00000594190 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
USHBP1-204ENST00000594190 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
USHBP1-204ENST00000594190 NOS1P29475 1434 aa24.11■■□□□ 1.45
USHBP1-204ENST00000594190 SCAF11Q99590 1463 aaKnown RBP24.09■■□□□ 1.45
USHBP1-204ENST00000594190 KANK1Q14678 1352 aa24.09■■□□□ 1.45
USHBP1-204ENST00000594190 ANKRD50Q9ULJ7 1429 aa24.09■■□□□ 1.45
USHBP1-204ENST00000594190 UNC13BO14795 1591 aa24.08■■□□□ 1.45
USHBP1-204ENST00000594190 TOM1O60784 492 aa24.08■■□□□ 1.45
USHBP1-204ENST00000594190 PIP4K2BP78356 416 aa24.08■■□□□ 1.45
USHBP1-204ENST00000594190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.45
USHBP1-204ENST00000594190 TET3O43151 1660 aa24.07■■□□□ 1.44
USHBP1-204ENST00000594190 LTKP29376 864 aa24.06■■□□□ 1.44
USHBP1-204ENST00000594190 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
USHBP1-204ENST00000594190 HSPA1LP34931 641 aa24.04■■□□□ 1.44
USHBP1-204ENST00000594190 XIRP1Q702N8 1843 aaKnown RBP24.04■■□□□ 1.44
USHBP1-204ENST00000594190 RPRD2Q5VT52 1461 aaKnown RBP24.04■■□□□ 1.44
USHBP1-204ENST00000594190 ROCK1Q13464 1354 aa24.03■■□□□ 1.44
USHBP1-204ENST00000594190 LRRC7Q96NW7 1537 aa24.02■■□□□ 1.44
USHBP1-204ENST00000594190 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
USHBP1-204ENST00000594190 TMEM2Q9UHN6 1383 aa24.02■■□□□ 1.44
USHBP1-204ENST00000594190 IDI1Q13907 227 aa24.01■■□□□ 1.43
USHBP1-204ENST00000594190 ADGRB3O60242 1522 aa24■■□□□ 1.43
USHBP1-204ENST00000594190 MED1Q15648 1581 aaPredicted RBP23.99■■□□□ 1.43
USHBP1-204ENST00000594190 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
USHBP1-204ENST00000594190 E9PCH4 1651 aa23.99■■□□□ 1.43
USHBP1-204ENST00000594190 ITGAEP38570 1179 aa23.98■■□□□ 1.43
USHBP1-204ENST00000594190 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
USHBP1-204ENST00000594190 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms