RNA–Protein interactions for RNA: ENST00000594018.5

GTPBP3-205, Transcript of GTP binding protein 3, mitochondrial, human

TSL 5

Gene GTPBP3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-205	ENST00000594018	FAM135A	Q9P2D6	1515 aa		29.02	■■■□□ 2.24
GTPBP3-205	ENST00000594018	RNF17	Q9BXT8	1623 aa	Known RBP	29.02	■■■□□ 2.24
GTPBP3-205	ENST00000594018	DUOX2	Q9NRD8	1548 aa		29.01	■■■□□ 2.23
GTPBP3-205	ENST00000594018	KIF15	Q9NS87	1388 aa		28.98	■■■□□ 2.23
GTPBP3-205	ENST00000594018	FAM50A	Q14320	339 aa	Known RBP	28.97	■■■□□ 2.23
GTPBP3-205	ENST00000594018	PTPRK	Q15262	1439 aa		28.96	■■■□□ 2.23
GTPBP3-205	ENST00000594018	WASHC2C	Q9Y4E1	1318 aa		28.94	■■■□□ 2.22
GTPBP3-205	ENST00000594018	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.93	■■■□□ 2.22
GTPBP3-205	ENST00000594018	RRP7BP	Q9NSQ0	103 aa		28.93	■■■□□ 2.22
GTPBP3-205	ENST00000594018	MROH1	Q8NDA8	1641 aa		28.93	■■■□□ 2.22
GTPBP3-205	ENST00000594018	MYO3A	Q8NEV4	1616 aa		28.93	■■■□□ 2.22
GTPBP3-205	ENST00000594018	CHIC2	Q9UKJ5	165 aa		28.92	■■■□□ 2.22
GTPBP3-205	ENST00000594018	ERBIN	Q96RT1	1412 aa		28.92	■■■□□ 2.22
GTPBP3-205	ENST00000594018	ZC3H13	Q5T200	1668 aa	Known RBP	28.92	■■■□□ 2.22
GTPBP3-205	ENST00000594018	ANKRD30A	Q9BXX3	1397 aa		28.91	■■■□□ 2.22
GTPBP3-205	ENST00000594018	PZP	P20742	1482 aa		28.89	■■■□□ 2.22
GTPBP3-205	ENST00000594018	ZNF142	P52746	1687 aa	Predicted RBP	28.88	■■■□□ 2.21
GTPBP3-205	ENST00000594018	ABCC3	O15438	1527 aa		28.88	■■■□□ 2.21
GTPBP3-205	ENST00000594018	ADGRL2	O95490	1459 aa		28.87	■■■□□ 2.21
GTPBP3-205	ENST00000594018	STRC	Q7RTU9	1775 aa		28.87	■■■□□ 2.21
GTPBP3-205	ENST00000594018	NCOA1	Q15788	1441 aa		28.86	■■■□□ 2.21
GTPBP3-205	ENST00000594018	CEP152	O94986	1710 aa		28.86	■■■□□ 2.21
GTPBP3-205	ENST00000594018	PRDM15	P57071	1507 aa	Predicted RBP	28.84	■■■□□ 2.21
GTPBP3-205	ENST00000594018	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.84	■■■□□ 2.21
GTPBP3-205	ENST00000594018	DEPDC5	O75140	1603 aa		28.83	■■■□□ 2.21
GTPBP3-205	ENST00000594018	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.81	■■■□□ 2.2
GTPBP3-205	ENST00000594018	CAMSAP1	Q5T5Y3	1602 aa		28.8	■■■□□ 2.2
GTPBP3-205	ENST00000594018	TNR	Q92752	1358 aa		28.79	■■■□□ 2.2
GTPBP3-205	ENST00000594018	A2ML1	A8K2U0	1454 aa		28.76	■■■□□ 2.19
GTPBP3-205	ENST00000594018	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.73	■■■□□ 2.19	1e-6	■■■□□ 14.7
GTPBP3-205	ENST00000594018	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
GTPBP3-205	ENST00000594018	SPATA31D1	Q6ZQQ2	1576 aa		28.72	■■■□□ 2.19
GTPBP3-205	ENST00000594018	DMRT2	Q9Y5R5	561 aa		28.72	■■■□□ 2.19
GTPBP3-205	ENST00000594018	KANK1	Q14678	1352 aa		28.72	■■■□□ 2.19
GTPBP3-205	ENST00000594018	ANKRD50	Q9ULJ7	1429 aa		28.71	■■■□□ 2.19
GTPBP3-205	ENST00000594018	CFAP65	Q6ZU64	1925 aa	Known RBP	28.7	■■■□□ 2.18
GTPBP3-205	ENST00000594018	ERVK-7	P63135	1459 aa		28.7	■■■□□ 2.18
GTPBP3-205	ENST00000594018	PLA2R1	Q13018	1463 aa		28.7	■■■□□ 2.18
GTPBP3-205	ENST00000594018	VWDE	Q8N2E2	1590 aa		28.68	■■■□□ 2.18
GTPBP3-205	ENST00000594018	NLRP1	Q9C000	1473 aa		28.68	■■■□□ 2.18
GTPBP3-205	ENST00000594018	PTPRT	O14522	1441 aa		28.68	■■■□□ 2.18
GTPBP3-205	ENST00000594018	ROCK1	Q13464	1354 aa		28.67	■■■□□ 2.18
GTPBP3-205	ENST00000594018	ITGAE	P38570	1179 aa		28.67	■■■□□ 2.18
GTPBP3-205	ENST00000594018	ARHGAP31	Q2M1Z3	1444 aa		28.67	■■■□□ 2.18
GTPBP3-205	ENST00000594018	LMTK2	Q8IWU2	1503 aa		28.65	■■■□□ 2.18
GTPBP3-205	ENST00000594018	RRBP1	Q9P2E9	1410 aa	Known RBP	28.65	■■■□□ 2.18
GTPBP3-205	ENST00000594018	NCKAP5L	Q9HCH0	1330 aa		28.62	■■■□□ 2.17
GTPBP3-205	ENST00000594018	UGGT1	Q9NYU2	1555 aa		28.62	■■■□□ 2.17
GTPBP3-205	ENST00000594018	ILDR1	Q86SU0	546 aa	Predicted RBP	28.6	■■■□□ 2.17
GTPBP3-205	ENST00000594018	UNC13B	O14795	1591 aa		28.59	■■■□□ 2.17
GTPBP3-205	ENST00000594018	PKD2	Q13563	968 aa		28.59	■■■□□ 2.17
GTPBP3-205	ENST00000594018	POLR1A	O95602	1720 aa	Predicted RBP	28.59	■■■□□ 2.17
GTPBP3-205	ENST00000594018	EFCAB6	Q5THR3	1501 aa		28.59	■■■□□ 2.17
GTPBP3-205	ENST00000594018	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.54	■■■□□ 2.16
GTPBP3-205	ENST00000594018	UBR1	Q8IWV7	1749 aa		28.52	■■■□□ 2.16
GTPBP3-205	ENST00000594018	TET3	O43151	1660 aa		28.52	■■■□□ 2.16
GTPBP3-205	ENST00000594018	NEURL4	Q96JN8	1562 aa		28.51	■■■□□ 2.15
GTPBP3-205	ENST00000594018	CERK	Q8TCT0	537 aa		28.5	■■■□□ 2.15
GTPBP3-205	ENST00000594018	GCC2	Q8IWJ2	1684 aa		28.5	■■■□□ 2.15
GTPBP3-205	ENST00000594018	FBXO41	Q8TF61	875 aa		28.48	■■■□□ 2.15
GTPBP3-205	ENST00000594018	SYNM	O15061	1565 aa		28.48	■■■□□ 2.15
GTPBP3-205	ENST00000594018	PIK3C2B	O00750	1634 aa		28.47	■■■□□ 2.15
GTPBP3-205	ENST00000594018	IQGAP3	Q86VI3	1631 aa		28.47	■■■□□ 2.15
GTPBP3-205	ENST00000594018	RPRD2	Q5VT52	1461 aa	Known RBP	28.46	■■■□□ 2.15
GTPBP3-205	ENST00000594018	ANKLE2	Q86XL3	938 aa		28.46	■■■□□ 2.15
GTPBP3-205	ENST00000594018	LTBP4	Q8N2S1	1624 aa		28.46	■■■□□ 2.15
GTPBP3-205	ENST00000594018	NOS1	P29475	1434 aa		28.45	■■■□□ 2.15
GTPBP3-205	ENST00000594018		E9PCH4	1651 aa		28.41	■■■□□ 2.14
GTPBP3-205	ENST00000594018	NUP155	O75694	1391 aa		28.4	■■■□□ 2.14
GTPBP3-205	ENST00000594018	KDM5A	P29375	1690 aa	Known RBP	28.4	■■■□□ 2.14
GTPBP3-205	ENST00000594018	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.4	■■■□□ 2.14
GTPBP3-205	ENST00000594018	MED14	O60244	1454 aa		28.4	■■■□□ 2.14
GTPBP3-205	ENST00000594018	NPHP4	O75161	1426 aa	Predicted RBP	28.39	■■■□□ 2.14
GTPBP3-205	ENST00000594018	IQGAP1	P46940	1657 aa		28.38	■■■□□ 2.13
GTPBP3-205	ENST00000594018	NAIP	Q13075	1403 aa		28.38	■■■□□ 2.13
GTPBP3-205	ENST00000594018	SLIT1	O75093	1534 aa		28.38	■■■□□ 2.13
GTPBP3-205	ENST00000594018	IDI1	Q13907	227 aa		28.37	■■■□□ 2.13
GTPBP3-205	ENST00000594018	ARHGAP23	Q9P227	1491 aa		28.37	■■■□□ 2.13
GTPBP3-205	ENST00000594018	ADGRB3	O60242	1522 aa		28.35	■■■□□ 2.13
GTPBP3-205	ENST00000594018	STAG3	Q9UJ98	1225 aa		28.35	■■■□□ 2.13
GTPBP3-205	ENST00000594018	SCAF11	Q99590	1463 aa	Known RBP	28.34	■■■□□ 2.13
GTPBP3-205	ENST00000594018	SLC52A1	Q9NWF4	448 aa		28.33	■■■□□ 2.13
GTPBP3-205	ENST00000594018	HFM1	A2PYH4	1435 aa		28.33	■■■□□ 2.13
GTPBP3-205	ENST00000594018	TMEM2	Q9UHN6	1383 aa		28.3	■■■□□ 2.12
GTPBP3-205	ENST00000594018	IQSEC2	Q5JU85	1478 aa		28.28	■■■□□ 2.12
GTPBP3-205	ENST00000594018	LTK	P29376	864 aa		28.28	■■■□□ 2.12
GTPBP3-205	ENST00000594018	TXNDC2	Q86VQ3	553 aa		28.28	■■■□□ 2.12
GTPBP3-205	ENST00000594018	MYO5B	Q9ULV0	1848 aa		28.27	■■■□□ 2.12
GTPBP3-205	ENST00000594018	EID1	Q9Y6B2	187 aa		28.26	■■■□□ 2.11
GTPBP3-205	ENST00000594018	TMEM131L	A2VDJ0	1609 aa		28.23	■■■□□ 2.11
GTPBP3-205	ENST00000594018	SPHKAP	Q2M3C7	1700 aa		28.23	■■■□□ 2.11
GTPBP3-205	ENST00000594018	CPS1	P31327	1500 aa		28.23	■■■□□ 2.11
GTPBP3-205	ENST00000594018	STRCP1	A6NGW2	1772 aa		28.17	■■■□□ 2.1
GTPBP3-205	ENST00000594018	TRIM52	Q96A61	297 aa		28.16	■■■□□ 2.1
GTPBP3-205	ENST00000594018	CHGA	P10645	457 aa	Known RBP	28.15	■■■□□ 2.1
GTPBP3-205	ENST00000594018	ZFYVE9	O95405	1425 aa		28.15	■■■□□ 2.1
GTPBP3-205	ENST00000594018	RIMS2	Q9UQ26	1411 aa		28.12	■■■□□ 2.09
GTPBP3-205	ENST00000594018	TRPM2	O94759	1503 aa		28.09	■■■□□ 2.09
GTPBP3-205	ENST00000594018	CLTCL1	P53675	1640 aa		28.07	■■■□□ 2.08
GTPBP3-205	ENST00000594018	PPP1R15A	O75807	674 aa	Predicted RBP	28.06	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms