RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 DEPDC5O75140 1603 aa28.13■■■□□ 2.09
ARHGEF1-205ENST00000593609 ARID4BQ4LE39 1312 aaPredicted RBP28.12■■■□□ 2.09
ARHGEF1-205ENST00000593609 UNC13BO14795 1591 aa28.11■■■□□ 2.09
ARHGEF1-205ENST00000593609 PRDM15P57071 1507 aaPredicted RBP28.1■■■□□ 2.09
ARHGEF1-205ENST00000593609 PPP6R1Q9UPN7 881 aa28.1■■■□□ 2.09
ARHGEF1-205ENST00000593609 FAM135AQ9P2D6 1515 aa28.09■■■□□ 2.09
ARHGEF1-205ENST00000593609 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.09
ARHGEF1-205ENST00000593609 KANK1Q14678 1352 aa28.06■■■□□ 2.08
ARHGEF1-205ENST00000593609 KDM5DQ9BY66 1539 aa28.05■■■□□ 2.08
ARHGEF1-205ENST00000593609 GGT6Q6P531 493 aa28.04■■■□□ 2.08
ARHGEF1-205ENST00000593609 VWDEQ8N2E2 1590 aa28.03■■■□□ 2.08
ARHGEF1-205ENST00000593609 NUP155O75694 1391 aa28.02■■■□□ 2.08
ARHGEF1-205ENST00000593609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.07
ARHGEF1-205ENST00000593609 TRIM52Q96A61 297 aa27.99■■■□□ 2.07
ARHGEF1-205ENST00000593609 IQGAP3Q86VI3 1631 aa27.99■■■□□ 2.07
ARHGEF1-205ENST00000593609 LMTK2Q8IWU2 1503 aa27.98■■■□□ 2.07
ARHGEF1-205ENST00000593609 MLECQ14165 292 aa27.98■■■□□ 2.07
ARHGEF1-205ENST00000593609 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
ARHGEF1-205ENST00000593609 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
ARHGEF1-205ENST00000593609 ABCC3O15438 1527 aa27.96■■■□□ 2.07
ARHGEF1-205ENST00000593609 WASHC2CQ9Y4E1 1318 aa27.95■■■□□ 2.07
ARHGEF1-205ENST00000593609 PZPP20742 1482 aa27.94■■■□□ 2.06
ARHGEF1-205ENST00000593609 ADAMTSL3P82987 1691 aa27.92■■■□□ 2.06
ARHGEF1-205ENST00000593609 ESF1Q9H501 851 aaKnown RBP27.92■■■□□ 2.06
ARHGEF1-205ENST00000593609 TET3O43151 1660 aa27.89■■■□□ 2.06
ARHGEF1-205ENST00000593609 ARHGAP31Q2M1Z3 1444 aa27.88■■■□□ 2.05
ARHGEF1-205ENST00000593609 MPHOSPH9Q99550 1183 aa27.87■■■□□ 2.05
ARHGEF1-205ENST00000593609 SLC4A1APQ9BWU0 796 aaKnown RBP27.87■■■□□ 2.05
ARHGEF1-205ENST00000593609 EFCAB6Q5THR3 1501 aa27.87■■■□□ 2.05
ARHGEF1-205ENST00000593609 CEP152O94986 1710 aa27.87■■■□□ 2.05
ARHGEF1-205ENST00000593609 MROH2AA6NES4 1674 aa27.86■■■□□ 2.05
ARHGEF1-205ENST00000593609 FER1L4A9Z1Z3 1794 aa27.86■■■□□ 2.05
ARHGEF1-205ENST00000593609 MADDQ8WXG6 1647 aa27.85■■■□□ 2.05
ARHGEF1-205ENST00000593609 CAMSAP1Q5T5Y3 1602 aa27.85■■■□□ 2.05
ARHGEF1-205ENST00000593609 CLTCQ00610 1675 aaKnown RBP27.84■■■□□ 2.05
ARHGEF1-205ENST00000593609 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.05
ARHGEF1-205ENST00000593609 ZMYM3Q14202 1370 aa27.8■■■□□ 2.04
ARHGEF1-205ENST00000593609 NPATQ14207 1427 aa27.79■■■□□ 2.04
ARHGEF1-205ENST00000593609 DHX57Q6P158 1386 aaKnown RBP27.79■■■□□ 2.04
ARHGEF1-205ENST00000593609 PKD2Q13563 968 aa27.79■■■□□ 2.04
ARHGEF1-205ENST00000593609 RIMS1Q86UR5 1692 aaKnown RBP27.76■■■□□ 2.03
ARHGEF1-205ENST00000593609 E9PCH4 1651 aa27.75■■■□□ 2.03
ARHGEF1-205ENST00000593609 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
ARHGEF1-205ENST00000593609 PTPRMP28827 1452 aa27.7■■■□□ 2.03
ARHGEF1-205ENST00000593609 PTPRTO14522 1441 aa27.7■■■□□ 2.03
ARHGEF1-205ENST00000593609 NOS1P29475 1434 aa27.7■■■□□ 2.03
ARHGEF1-205ENST00000593609 C3P01024 1663 aa27.7■■■□□ 2.02
ARHGEF1-205ENST00000593609 ERVK-7P63135 1459 aa27.69■■■□□ 2.02
ARHGEF1-205ENST00000593609 SPATA31D1Q6ZQQ2 1576 aa27.69■■■□□ 2.02
ARHGEF1-205ENST00000593609 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
ARHGEF1-205ENST00000593609 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
ARHGEF1-205ENST00000593609 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
ARHGEF1-205ENST00000593609 TRPM2O94759 1503 aa27.64■■■□□ 2.02
ARHGEF1-205ENST00000593609 FOXD1Q16676 465 aa27.64■■■□□ 2.02
ARHGEF1-205ENST00000593609 FBXO31Q5XUX0 539 aaPredicted RBP27.64■■■□□ 2.02
ARHGEF1-205ENST00000593609 CLSPNQ9HAW4 1339 aa27.64■■■□□ 2.01
ARHGEF1-205ENST00000593609 CEBPAP49715 358 aaPredicted RBP27.63■■■□□ 2.01
ARHGEF1-205ENST00000593609 SPHKAPQ2M3C7 1700 aa27.63■■■□□ 2.01
ARHGEF1-205ENST00000593609 TNRQ92752 1358 aa27.6■■■□□ 2.01
ARHGEF1-205ENST00000593609 SYNMO15061 1565 aa27.59■■■□□ 2.01
ARHGEF1-205ENST00000593609 CCER1Q8TC90 406 aaPredicted RBP27.58■■■□□ 2.01
ARHGEF1-205ENST00000593609 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
ARHGEF1-205ENST00000593609 CCDC144AA2RUR9 1427 aa27.56■■■□□ 2
ARHGEF1-205ENST00000593609 PIK3C2BO00750 1634 aa27.54■■■□□ 2
ARHGEF1-205ENST00000593609 NLRP1Q9C000 1473 aa27.54■■■□□ 2
ARHGEF1-205ENST00000593609 CFAP65Q6ZU64 1925 aaKnown RBP27.51■■■□□ 2
ARHGEF1-205ENST00000593609 PLPPR3Q6T4P5 718 aa27.5■■□□□ 1.99
ARHGEF1-205ENST00000593609 CLTCL1P53675 1640 aa27.49■■□□□ 1.99
ARHGEF1-205ENST00000593609 SETD1BQ9UPS6 1966 aaKnown RBP27.49■■□□□ 1.99
ARHGEF1-205ENST00000593609 IDI1Q13907 227 aa27.48■■□□□ 1.99
ARHGEF1-205ENST00000593609 UGGT1Q9NYU2 1555 aa27.48■■□□□ 1.99
ARHGEF1-205ENST00000593609 MYO3AQ8NEV4 1616 aa27.46■■□□□ 1.99
ARHGEF1-205ENST00000593609 NEURL4Q96JN8 1562 aa27.44■■□□□ 1.98
ARHGEF1-205ENST00000593609 A2ML1A8K2U0 1454 aa27.44■■□□□ 1.98
ARHGEF1-205ENST00000593609 KDM5AP29375 1690 aaKnown RBP27.43■■□□□ 1.98
ARHGEF1-205ENST00000593609 UHRF1BP1Q6BDS2 1440 aa27.42■■□□□ 1.98
ARHGEF1-205ENST00000593609 ADGRB3O60242 1522 aa27.41■■□□□ 1.98
ARHGEF1-205ENST00000593609 SPATA31E1Q6ZUB1 1445 aa27.41■■□□□ 1.98
ARHGEF1-205ENST00000593609 ZNF142P52746 1687 aaPredicted RBP27.4■■□□□ 1.98
ARHGEF1-205ENST00000593609 CEP170BQ9Y4F5 1589 aaPredicted RBP27.4■■□□□ 1.98
ARHGEF1-205ENST00000593609 SIN3AQ96ST3 1273 aa27.39■■□□□ 1.98
ARHGEF1-205ENST00000593609 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
ARHGEF1-205ENST00000593609 KIF1BO60333 1816 aa27.37■■□□□ 1.97
ARHGEF1-205ENST00000593609 STAG3Q9UJ98 1225 aa27.35■■□□□ 1.97
ARHGEF1-205ENST00000593609 UBR1Q8IWV7 1749 aa27.34■■□□□ 1.97
ARHGEF1-205ENST00000593609 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.97
ARHGEF1-205ENST00000593609 NEUROD1Q13562 356 aa27.33■■□□□ 1.97
ARHGEF1-205ENST00000593609 THEMISQ8N1K5 641 aaPredicted RBP27.32■■□□□ 1.96
ARHGEF1-205ENST00000593609 TIMELESSQ9UNS1 1208 aa27.32■■□□□ 1.96
ARHGEF1-205ENST00000593609 RPGRIP1LQ68CZ1 1315 aa27.31■■□□□ 1.96
ARHGEF1-205ENST00000593609 TONSLQ96HA7 1378 aa27.27■■□□□ 1.96
ARHGEF1-205ENST00000593609 TMEM2Q9UHN6 1383 aa27.27■■□□□ 1.96
ARHGEF1-205ENST00000593609 SLIT1O75093 1534 aa27.26■■□□□ 1.96
ARHGEF1-205ENST00000593609 LMTK3Q96Q04 1460 aa27.26■■□□□ 1.95
ARHGEF1-205ENST00000593609 ARHGAP23Q9P227 1491 aa27.26■■□□□ 1.95
ARHGEF1-205ENST00000593609 STAC3Q96MF2 364 aa27.26■■□□□ 1.95
ARHGEF1-205ENST00000593609 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
ARHGEF1-205ENST00000593609 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
ARHGEF1-205ENST00000593609 HDGFP51858 240 aaKnown RBP27.23■■□□□ 1.95
ARHGEF1-205ENST00000593609 ZFYVE9O95405 1425 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms