RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 C3P01024 1663 aa14.61□□□□□ -0.07
DDX39A-220ENST00000593008 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
DDX39A-220ENST00000593008 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
DDX39A-220ENST00000593008 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
DDX39A-220ENST00000593008 PCGF6Q9BYE7 350 aa14.6□□□□□ -0.07
DDX39A-220ENST00000593008 CLTCQ00610 1675 aaKnown RBP14.59□□□□□ -0.07
DDX39A-220ENST00000593008 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
DDX39A-220ENST00000593008 WASHC2CQ9Y4E1 1318 aa14.58□□□□□ -0.08
DDX39A-220ENST00000593008 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
DDX39A-220ENST00000593008 NAIPQ13075 1403 aa14.58□□□□□ -0.08
DDX39A-220ENST00000593008 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
DDX39A-220ENST00000593008 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
DDX39A-220ENST00000593008 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
DDX39A-220ENST00000593008 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
DDX39A-220ENST00000593008 DUOX2Q9NRD8 1548 aa14.55□□□□□ -0.08
DDX39A-220ENST00000593008 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
DDX39A-220ENST00000593008 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
DDX39A-220ENST00000593008 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-220ENST00000593008 KDM5DQ9BY66 1539 aa14.53□□□□□ -0.08
DDX39A-220ENST00000593008 NPATQ14207 1427 aa14.53□□□□□ -0.08
DDX39A-220ENST00000593008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.088e-8■■■□□ 18.7
DDX39A-220ENST00000593008 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.09
DDX39A-220ENST00000593008 ANKRD50Q9ULJ7 1429 aa14.51□□□□□ -0.09
DDX39A-220ENST00000593008 ERBINQ96RT1 1412 aa14.5□□□□□ -0.09
DDX39A-220ENST00000593008 RAB3GAP2Q9H2M9 1393 aa14.5□□□□□ -0.09
DDX39A-220ENST00000593008 RNF17Q9BXT8 1623 aaKnown RBP14.5□□□□□ -0.09
DDX39A-220ENST00000593008 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
DDX39A-220ENST00000593008 ABCC3O15438 1527 aa14.49□□□□□ -0.09
DDX39A-220ENST00000593008 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
DDX39A-220ENST00000593008 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
DDX39A-220ENST00000593008 PZPP20742 1482 aa14.48□□□□□ -0.09
DDX39A-220ENST00000593008 TNRQ92752 1358 aa14.47□□□□□ -0.09
DDX39A-220ENST00000593008 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.09
DDX39A-220ENST00000593008 MYO3AQ8NEV4 1616 aa14.46□□□□□ -0.09
DDX39A-220ENST00000593008 UNC13BO14795 1591 aa14.46□□□□□ -0.09
DDX39A-220ENST00000593008 DEPDC5O75140 1603 aa14.45□□□□□ -0.1
DDX39A-220ENST00000593008 PRDM15P57071 1507 aaPredicted RBP14.44□□□□□ -0.1
DDX39A-220ENST00000593008 KANK1Q14678 1352 aa14.44□□□□□ -0.1
DDX39A-220ENST00000593008 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
DDX39A-220ENST00000593008 CAMSAP1Q5T5Y3 1602 aa14.43□□□□□ -0.1
DDX39A-220ENST00000593008 CEP152O94986 1710 aa14.43□□□□□ -0.1
DDX39A-220ENST00000593008 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
DDX39A-220ENST00000593008 ZC3H13Q5T200 1668 aaKnown RBP14.42□□□□□ -0.1
DDX39A-220ENST00000593008 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
DDX39A-220ENST00000593008 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
DDX39A-220ENST00000593008 A2ML1A8K2U0 1454 aa14.41□□□□□ -0.1
DDX39A-220ENST00000593008 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
DDX39A-220ENST00000593008 ERVK-7P63135 1459 aa14.4□□□□□ -0.1
DDX39A-220ENST00000593008 FBXO41Q8TF61 875 aa14.4□□□□□ -0.1
DDX39A-220ENST00000593008 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
DDX39A-220ENST00000593008 NUP155O75694 1391 aa14.38□□□□□ -0.11
DDX39A-220ENST00000593008 IQGAP3Q86VI3 1631 aa14.38□□□□□ -0.11
DDX39A-220ENST00000593008 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
DDX39A-220ENST00000593008 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
DDX39A-220ENST00000593008 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
DDX39A-220ENST00000593008 NLRP1Q9C000 1473 aa14.37□□□□□ -0.11
DDX39A-220ENST00000593008 PTPRTO14522 1441 aa14.35□□□□□ -0.11
DDX39A-220ENST00000593008 PKD2Q13563 968 aa14.35□□□□□ -0.11
DDX39A-220ENST00000593008 FOXD1Q16676 465 aa14.35□□□□□ -0.11
DDX39A-220ENST00000593008 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
DDX39A-220ENST00000593008 PLA2R1Q13018 1463 aa14.35□□□□□ -0.11
DDX39A-220ENST00000593008 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
DDX39A-220ENST00000593008 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
DDX39A-220ENST00000593008 UGGT1Q9NYU2 1555 aa14.34□□□□□ -0.11
DDX39A-220ENST00000593008 EFCAB6Q5THR3 1501 aa14.33□□□□□ -0.12
DDX39A-220ENST00000593008 ANKLE2Q86XL3 938 aa14.32□□□□□ -0.12
DDX39A-220ENST00000593008 CERKQ8TCT0 537 aa14.32□□□□□ -0.12
DDX39A-220ENST00000593008 E9PCH4 1651 aa14.32□□□□□ -0.12
DDX39A-220ENST00000593008 TET3O43151 1660 aa14.32□□□□□ -0.12
DDX39A-220ENST00000593008 DHX57Q6P158 1386 aaKnown RBP14.32□□□□□ -0.12
DDX39A-220ENST00000593008 IDI1Q13907 227 aa14.3□□□□□ -0.12
DDX39A-220ENST00000593008 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
DDX39A-220ENST00000593008 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
DDX39A-220ENST00000593008 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
DDX39A-220ENST00000593008 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
DDX39A-220ENST00000593008 SYNMO15061 1565 aa14.28□□□□□ -0.12
DDX39A-220ENST00000593008 NOS1P29475 1434 aa14.28□□□□□ -0.12
DDX39A-220ENST00000593008 NEURL4Q96JN8 1562 aa14.26□□□□□ -0.13
DDX39A-220ENST00000593008 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
DDX39A-220ENST00000593008 RPRD2Q5VT52 1461 aaKnown RBP14.25□□□□□ -0.13
DDX39A-220ENST00000593008 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-220ENST00000593008 UBR1Q8IWV7 1749 aa14.25□□□□□ -0.13
DDX39A-220ENST00000593008 HRCP23327 699 aa14.25□□□□□ -0.13
DDX39A-220ENST00000593008 LTKP29376 864 aa14.25□□□□□ -0.13
DDX39A-220ENST00000593008 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
DDX39A-220ENST00000593008 SLC52A1Q9NWF4 448 aa14.24□□□□□ -0.13
DDX39A-220ENST00000593008 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
DDX39A-220ENST00000593008 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
DDX39A-220ENST00000593008 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
DDX39A-220ENST00000593008 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-220ENST00000593008 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
DDX39A-220ENST00000593008 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
DDX39A-220ENST00000593008 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
DDX39A-220ENST00000593008 SPHKAPQ2M3C7 1700 aa14.22□□□□□ -0.13
DDX39A-220ENST00000593008 MED14O60244 1454 aa14.21□□□□□ -0.13
DDX39A-220ENST00000593008 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
DDX39A-220ENST00000593008 CLTCL1P53675 1640 aa14.21□□□□□ -0.13
DDX39A-220ENST00000593008 SLIT1O75093 1534 aa14.2□□□□□ -0.14
DDX39A-220ENST00000593008 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
DDX39A-220ENST00000593008 TRPM2O94759 1503 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms