RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
PKN1-215ENST00000592960 KIF3BO15066 747 aa23.75■■□□□ 1.39
PKN1-215ENST00000592960 TNRQ92752 1358 aa23.74■■□□□ 1.39
PKN1-215ENST00000592960 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
PKN1-215ENST00000592960 FAM135AQ9P2D6 1515 aa23.71■■□□□ 1.39
PKN1-215ENST00000592960 PZPP20742 1482 aa23.7■■□□□ 1.38
PKN1-215ENST00000592960 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
PKN1-215ENST00000592960 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
PKN1-215ENST00000592960 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
PKN1-215ENST00000592960 TOM1O60784 492 aa23.68■■□□□ 1.38
PKN1-215ENST00000592960 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
PKN1-215ENST00000592960 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
PKN1-215ENST00000592960 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
PKN1-215ENST00000592960 CPS1P31327 1500 aa23.67■■□□□ 1.38
PKN1-215ENST00000592960 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
PKN1-215ENST00000592960 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
PKN1-215ENST00000592960 HSPA1LP34931 641 aa23.65■■□□□ 1.38
PKN1-215ENST00000592960 NCOA2Q15596 1464 aa23.63■■□□□ 1.37
PKN1-215ENST00000592960 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
PKN1-215ENST00000592960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
PKN1-215ENST00000592960 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
PKN1-215ENST00000592960 TSPY4P0CV99 314 aa23.62■■□□□ 1.37
PKN1-215ENST00000592960 TSPY10P0CW01 314 aa23.62■■□□□ 1.37
PKN1-215ENST00000592960 MED14O60244 1454 aa23.62■■□□□ 1.37
PKN1-215ENST00000592960 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
PKN1-215ENST00000592960 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
PKN1-215ENST00000592960 POLR1AO95602 1720 aaPredicted RBP23.61■■□□□ 1.37
PKN1-215ENST00000592960 SCAF1Q9H7N4 1312 aaKnown RBP23.58■■□□□ 1.36
PKN1-215ENST00000592960 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
PKN1-215ENST00000592960 VWDEQ8N2E2 1590 aa23.57■■□□□ 1.36
PKN1-215ENST00000592960 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
PKN1-215ENST00000592960 UGGT1Q9NYU2 1555 aa23.57■■□□□ 1.36
PKN1-215ENST00000592960 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
PKN1-215ENST00000592960 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
PKN1-215ENST00000592960 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
PKN1-215ENST00000592960 ALKQ9UM73 1620 aa23.49■■□□□ 1.35
PKN1-215ENST00000592960 ABCC3O15438 1527 aa23.49■■□□□ 1.35
PKN1-215ENST00000592960 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
PKN1-215ENST00000592960 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
PKN1-215ENST00000592960 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
PKN1-215ENST00000592960 IQGAP1P46940 1657 aa23.44■■□□□ 1.34
PKN1-215ENST00000592960 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
PKN1-215ENST00000592960 ERVK-7P63135 1459 aa23.44■■□□□ 1.34
PKN1-215ENST00000592960 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
PKN1-215ENST00000592960 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
PKN1-215ENST00000592960 MROH1Q8NDA8 1641 aa23.39■■□□□ 1.33
PKN1-215ENST00000592960 STRCP1A6NGW2 1772 aa23.39■■□□□ 1.33
PKN1-215ENST00000592960 LTKP29376 864 aa23.38■■□□□ 1.33
PKN1-215ENST00000592960 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
PKN1-215ENST00000592960 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
PKN1-215ENST00000592960 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
PKN1-215ENST00000592960 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
PKN1-215ENST00000592960 TXNDC2Q86VQ3 553 aa23.36■■□□□ 1.33
PKN1-215ENST00000592960 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
PKN1-215ENST00000592960 ARHGAP23Q9P227 1491 aa23.36■■□□□ 1.33
PKN1-215ENST00000592960 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
PKN1-215ENST00000592960 SYNMO15061 1565 aa23.34■■□□□ 1.33
PKN1-215ENST00000592960 SLIT1O75093 1534 aa23.33■■□□□ 1.33
PKN1-215ENST00000592960 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.33
PKN1-215ENST00000592960 CFAP65Q6ZU64 1925 aaKnown RBP23.32■■□□□ 1.32
PKN1-215ENST00000592960 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
PKN1-215ENST00000592960 KIF15Q9NS87 1388 aa23.29■■□□□ 1.32
PKN1-215ENST00000592960 CEP152O94986 1710 aa23.28■■□□□ 1.32
PKN1-215ENST00000592960 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
PKN1-215ENST00000592960 ABCC5O15440 1437 aa23.26■■□□□ 1.31
PKN1-215ENST00000592960 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
PKN1-215ENST00000592960 PRDM15P57071 1507 aaPredicted RBP23.26■■□□□ 1.31
PKN1-215ENST00000592960 TMEM2Q9UHN6 1383 aa23.26■■□□□ 1.31
PKN1-215ENST00000592960 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
PKN1-215ENST00000592960 RGS17Q9UGC6 210 aaPredicted RBP23.25■■□□□ 1.31
PKN1-215ENST00000592960 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
PKN1-215ENST00000592960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
PKN1-215ENST00000592960 IDI1Q13907 227 aa23.21■■□□□ 1.31
PKN1-215ENST00000592960 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
PKN1-215ENST00000592960 KANK1Q14678 1352 aa23.2■■□□□ 1.3
PKN1-215ENST00000592960 KCNA6P17658 529 aa23.2■■□□□ 1.3
PKN1-215ENST00000592960 XIRP1Q702N8 1843 aaKnown RBP23.19■■□□□ 1.3
PKN1-215ENST00000592960 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
PKN1-215ENST00000592960 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
PKN1-215ENST00000592960 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
PKN1-215ENST00000592960 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
PKN1-215ENST00000592960 TMEM94Q12767 1356 aa23.16■■□□□ 1.3
PKN1-215ENST00000592960 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
PKN1-215ENST00000592960 DAPK1P53355 1430 aa23.16■■□□□ 1.3
PKN1-215ENST00000592960 TET3O43151 1660 aa23.14■■□□□ 1.29
PKN1-215ENST00000592960 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
PKN1-215ENST00000592960 APLP2Q06481 763 aa23.13■■□□□ 1.29
PKN1-215ENST00000592960 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
PKN1-215ENST00000592960 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
PKN1-215ENST00000592960 NOS1P29475 1434 aa23.12■■□□□ 1.29
PKN1-215ENST00000592960 PROSER2Q86WR7 435 aaPredicted RBP23.12■■□□□ 1.29
PKN1-215ENST00000592960 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
PKN1-215ENST00000592960 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
PKN1-215ENST00000592960 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
PKN1-215ENST00000592960 POTEAQ6S8J7 498 aa23.07■■□□□ 1.28
PKN1-215ENST00000592960 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
PKN1-215ENST00000592960 NKTRP30414 1462 aaKnown RBP23.04■■□□□ 1.28
PKN1-215ENST00000592960 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
PKN1-215ENST00000592960 ADGRB3O60242 1522 aa23.02■■□□□ 1.28
PKN1-215ENST00000592960 ROBO1Q9Y6N7 1651 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms