RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
H3F3B-212ENST00000592643 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
H3F3B-212ENST00000592643 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
H3F3B-212ENST00000592643 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
H3F3B-212ENST00000592643 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
H3F3B-212ENST00000592643 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
H3F3B-212ENST00000592643 ITGAEP38570 1179 aa18.17■□□□□ 0.5
H3F3B-212ENST00000592643 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
H3F3B-212ENST00000592643 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
H3F3B-212ENST00000592643 C3P01024 1663 aa18.15■□□□□ 0.5
H3F3B-212ENST00000592643 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
H3F3B-212ENST00000592643 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
H3F3B-212ENST00000592643 ABCC3O15438 1527 aa18.13■□□□□ 0.49
H3F3B-212ENST00000592643 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
H3F3B-212ENST00000592643 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
H3F3B-212ENST00000592643 ANKRD50Q9ULJ7 1429 aa18.13■□□□□ 0.49
H3F3B-212ENST00000592643 PRDM15P57071 1507 aaPredicted RBP18.12■□□□□ 0.49
H3F3B-212ENST00000592643 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
H3F3B-212ENST00000592643 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
H3F3B-212ENST00000592643 WASHC2CQ9Y4E1 1318 aa18.11■□□□□ 0.49
H3F3B-212ENST00000592643 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
H3F3B-212ENST00000592643 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
H3F3B-212ENST00000592643 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
H3F3B-212ENST00000592643 NPATQ14207 1427 aa18.08■□□□□ 0.49
H3F3B-212ENST00000592643 PZPP20742 1482 aa18.07■□□□□ 0.48
H3F3B-212ENST00000592643 NAIPQ13075 1403 aa18.06■□□□□ 0.48
H3F3B-212ENST00000592643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
H3F3B-212ENST00000592643 HSPA2P54652 639 aa18.05■□□□□ 0.48
H3F3B-212ENST00000592643 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
H3F3B-212ENST00000592643 CEP152O94986 1710 aa18.03■□□□□ 0.48
H3F3B-212ENST00000592643 ZC3H13Q5T200 1668 aaKnown RBP18.02■□□□□ 0.47
H3F3B-212ENST00000592643 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
H3F3B-212ENST00000592643 ARHGAP31Q2M1Z3 1444 aa18.01■□□□□ 0.47
H3F3B-212ENST00000592643 PREX1Q8TCU6 1659 aa18.01■□□□□ 0.47
H3F3B-212ENST00000592643 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
H3F3B-212ENST00000592643 UNC13BO14795 1591 aa18■□□□□ 0.47
H3F3B-212ENST00000592643 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
H3F3B-212ENST00000592643 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
H3F3B-212ENST00000592643 TNRQ92752 1358 aa17.98■□□□□ 0.47
H3F3B-212ENST00000592643 SPATA31D1Q6ZQQ2 1576 aa17.98■□□□□ 0.47
H3F3B-212ENST00000592643 SETD1BQ9UPS6 1966 aaKnown RBP17.97■□□□□ 0.47
H3F3B-212ENST00000592643 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
H3F3B-212ENST00000592643 MYO3AQ8NEV4 1616 aa17.97■□□□□ 0.47
H3F3B-212ENST00000592643 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
H3F3B-212ENST00000592643 KANK1Q14678 1352 aa17.96■□□□□ 0.47
H3F3B-212ENST00000592643 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
H3F3B-212ENST00000592643 NUP155O75694 1391 aa17.93■□□□□ 0.46
H3F3B-212ENST00000592643 CEP170BQ9Y4F5 1589 aaPredicted RBP17.93■□□□□ 0.46
H3F3B-212ENST00000592643 NOS1P29475 1434 aa17.93■□□□□ 0.46
H3F3B-212ENST00000592643 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
H3F3B-212ENST00000592643 A2ML1A8K2U0 1454 aa17.92■□□□□ 0.46
H3F3B-212ENST00000592643 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-212ENST00000592643 SYNMO15061 1565 aa17.91■□□□□ 0.46
H3F3B-212ENST00000592643 TET3O43151 1660 aa17.9■□□□□ 0.46
H3F3B-212ENST00000592643 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
H3F3B-212ENST00000592643 STRCQ7RTU9 1775 aa17.89■□□□□ 0.45
H3F3B-212ENST00000592643 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
H3F3B-212ENST00000592643 E9PCH4 1651 aa17.87■□□□□ 0.45
H3F3B-212ENST00000592643 IDI1Q13907 227 aa17.85■□□□□ 0.45
H3F3B-212ENST00000592643 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
H3F3B-212ENST00000592643 PLA2R1Q13018 1463 aa17.83■□□□□ 0.45
H3F3B-212ENST00000592643 SETD5Q9C0A6 1442 aa17.83■□□□□ 0.45
H3F3B-212ENST00000592643 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
H3F3B-212ENST00000592643 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.44
H3F3B-212ENST00000592643 PTPRTO14522 1441 aa17.81■□□□□ 0.44
H3F3B-212ENST00000592643 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
H3F3B-212ENST00000592643 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
H3F3B-212ENST00000592643 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
H3F3B-212ENST00000592643 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
H3F3B-212ENST00000592643 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
H3F3B-212ENST00000592643 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
H3F3B-212ENST00000592643 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
H3F3B-212ENST00000592643 PKD2Q13563 968 aa17.77■□□□□ 0.44
H3F3B-212ENST00000592643 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
H3F3B-212ENST00000592643 LTKP29376 864 aa17.76■□□□□ 0.43
H3F3B-212ENST00000592643 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
H3F3B-212ENST00000592643 SLIT1O75093 1534 aa17.75■□□□□ 0.43
H3F3B-212ENST00000592643 ADGRB3O60242 1522 aa17.74■□□□□ 0.43
H3F3B-212ENST00000592643 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
H3F3B-212ENST00000592643 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
H3F3B-212ENST00000592643 TMEM131LA2VDJ0 1609 aa17.72■□□□□ 0.43
H3F3B-212ENST00000592643 MED14O60244 1454 aa17.72■□□□□ 0.43
H3F3B-212ENST00000592643 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.43
H3F3B-212ENST00000592643 ANKLE2Q86XL3 938 aa17.71■□□□□ 0.43
H3F3B-212ENST00000592643 TRPM2O94759 1503 aa17.71■□□□□ 0.43
H3F3B-212ENST00000592643 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
H3F3B-212ENST00000592643 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
H3F3B-212ENST00000592643 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
H3F3B-212ENST00000592643 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
H3F3B-212ENST00000592643 HRCP23327 699 aa17.69■□□□□ 0.42
H3F3B-212ENST00000592643 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
H3F3B-212ENST00000592643 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
H3F3B-212ENST00000592643 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
H3F3B-212ENST00000592643 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
H3F3B-212ENST00000592643 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
H3F3B-212ENST00000592643 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
H3F3B-212ENST00000592643 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
H3F3B-212ENST00000592643 MYO5BQ9ULV0 1848 aa17.64■□□□□ 0.41
H3F3B-212ENST00000592643 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
H3F3B-212ENST00000592643 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms