RNA–Protein interactions for RNA: ENST00000592597.1

POLR2E-210, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-210ENST00000592597 RGS17Q9UGC6 210 aaPredicted RBP25.08■■□□□ 1.61
POLR2E-210ENST00000592597 ANKLE2Q86XL3 938 aa25.07■■□□□ 1.6
POLR2E-210ENST00000592597 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
POLR2E-210ENST00000592597 TNRQ92752 1358 aa25.06■■□□□ 1.6
POLR2E-210ENST00000592597 STRCP1A6NGW2 1772 aa25.06■■□□□ 1.6
POLR2E-210ENST00000592597 KIAA1107Q9UPP5 1409 aa25.04■■□□□ 1.6
POLR2E-210ENST00000592597 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
POLR2E-210ENST00000592597 NPHP4O75161 1426 aaPredicted RBP25.01■■□□□ 1.59
POLR2E-210ENST00000592597 PLEKHH2Q8IVE3 1493 aa25■■□□□ 1.59
POLR2E-210ENST00000592597 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
POLR2E-210ENST00000592597 THEMISQ8N1K5 641 aaPredicted RBP24.98■■□□□ 1.59
POLR2E-210ENST00000592597 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
POLR2E-210ENST00000592597 KIF3BO15066 747 aa24.97■■□□□ 1.59
POLR2E-210ENST00000592597 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
POLR2E-210ENST00000592597 UGGT1Q9NYU2 1555 aa24.95■■□□□ 1.58
POLR2E-210ENST00000592597 PZPP20742 1482 aa24.95■■□□□ 1.58
POLR2E-210ENST00000592597 MED14O60244 1454 aa24.94■■□□□ 1.58
POLR2E-210ENST00000592597 FYCO1Q9BQS8 1478 aa24.94■■□□□ 1.58
POLR2E-210ENST00000592597 DEPDC5O75140 1603 aa24.94■■□□□ 1.58
POLR2E-210ENST00000592597 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
POLR2E-210ENST00000592597 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
POLR2E-210ENST00000592597 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
POLR2E-210ENST00000592597 MIA2Q96PC5 1412 aa24.92■■□□□ 1.58
POLR2E-210ENST00000592597 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
POLR2E-210ENST00000592597 POTEAQ6S8J7 498 aa24.9■■□□□ 1.58
POLR2E-210ENST00000592597 KDM5DQ9BY66 1539 aa24.9■■□□□ 1.58
POLR2E-210ENST00000592597 MBD5Q9P267 1494 aa24.89■■□□□ 1.57
POLR2E-210ENST00000592597 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
POLR2E-210ENST00000592597 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
POLR2E-210ENST00000592597 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
POLR2E-210ENST00000592597 SYNMO15061 1565 aa24.84■■□□□ 1.57
POLR2E-210ENST00000592597 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
POLR2E-210ENST00000592597 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
POLR2E-210ENST00000592597 TIAM1Q13009 1591 aa24.83■■□□□ 1.57
POLR2E-210ENST00000592597 MTUS2Q5JR59 1369 aa24.82■■□□□ 1.56
POLR2E-210ENST00000592597 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
POLR2E-210ENST00000592597 ZC3H13Q5T200 1668 aaKnown RBP24.81■■□□□ 1.56
POLR2E-210ENST00000592597 LTKP29376 864 aa24.72■■□□□ 1.55
POLR2E-210ENST00000592597 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
POLR2E-210ENST00000592597 CCDC141Q6ZP82 1450 aa24.71■■□□□ 1.55
POLR2E-210ENST00000592597 TXNDC2Q86VQ3 553 aa24.68■■□□□ 1.54
POLR2E-210ENST00000592597 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
POLR2E-210ENST00000592597 ERVK-7P63135 1459 aa24.67■■□□□ 1.54
POLR2E-210ENST00000592597 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
POLR2E-210ENST00000592597 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
POLR2E-210ENST00000592597 ABCC3O15438 1527 aa24.66■■□□□ 1.54
POLR2E-210ENST00000592597 CAMSAP2Q08AD1 1489 aa24.66■■□□□ 1.54
POLR2E-210ENST00000592597 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
POLR2E-210ENST00000592597 NCOA2Q15596 1464 aa24.64■■□□□ 1.54
POLR2E-210ENST00000592597 CEP152O94986 1710 aa24.64■■□□□ 1.54
POLR2E-210ENST00000592597 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.53
POLR2E-210ENST00000592597 TMEM94Q12767 1356 aa24.61■■□□□ 1.53
POLR2E-210ENST00000592597 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
POLR2E-210ENST00000592597 TSPY4P0CV99 314 aa24.59■■□□□ 1.53
POLR2E-210ENST00000592597 TSPY10P0CW01 314 aa24.59■■□□□ 1.53
POLR2E-210ENST00000592597 RSPH4AQ5TD94 716 aa24.58■■□□□ 1.53
POLR2E-210ENST00000592597 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.52
POLR2E-210ENST00000592597 SLIT1O75093 1534 aa24.56■■□□□ 1.52
POLR2E-210ENST00000592597 MROH1Q8NDA8 1641 aa24.55■■□□□ 1.52
POLR2E-210ENST00000592597 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
POLR2E-210ENST00000592597 PROSER2Q86WR7 435 aaPredicted RBP24.54■■□□□ 1.52
POLR2E-210ENST00000592597 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
POLR2E-210ENST00000592597 PHLPP1O60346 1717 aa24.53■■□□□ 1.52
POLR2E-210ENST00000592597 ARHGEF5Q12774 1597 aa24.53■■□□□ 1.52
POLR2E-210ENST00000592597 TRIM52Q96A61 297 aa24.52■■□□□ 1.52
POLR2E-210ENST00000592597 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
POLR2E-210ENST00000592597 SLC26A8Q96RN1 970 aa24.51■■□□□ 1.51
POLR2E-210ENST00000592597 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
POLR2E-210ENST00000592597 KCNA6P17658 529 aa24.49■■□□□ 1.51
POLR2E-210ENST00000592597 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
POLR2E-210ENST00000592597 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
POLR2E-210ENST00000592597 STAG3Q9UJ98 1225 aa24.47■■□□□ 1.51
POLR2E-210ENST00000592597 TMEM2Q9UHN6 1383 aa24.46■■□□□ 1.51
POLR2E-210ENST00000592597 JCADQ9P266 1359 aa24.45■■□□□ 1.5
POLR2E-210ENST00000592597 SLAIN2Q9P270 581 aa24.44■■□□□ 1.5
POLR2E-210ENST00000592597 LRP6O75581 1613 aa24.43■■□□□ 1.5
POLR2E-210ENST00000592597 MAST1Q9Y2H9 1570 aa24.42■■□□□ 1.5
POLR2E-210ENST00000592597 LRRC9Q6ZRR7 1453 aa24.42■■□□□ 1.5
POLR2E-210ENST00000592597 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
POLR2E-210ENST00000592597 PRDM15P57071 1507 aaPredicted RBP24.4■■□□□ 1.5
POLR2E-210ENST00000592597 TET3O43151 1660 aa24.4■■□□□ 1.5
POLR2E-210ENST00000592597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.51e-12■□□□□ 9.3
POLR2E-210ENST00000592597 MSH6P52701 1360 aa24.4■■□□□ 1.5
POLR2E-210ENST00000592597 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.49
POLR2E-210ENST00000592597 BCANQ96GW7 911 aa24.38■■□□□ 1.49
POLR2E-210ENST00000592597 ARHGAP31Q2M1Z3 1444 aa24.36■■□□□ 1.49
POLR2E-210ENST00000592597 EFCAB6Q5THR3 1501 aa24.36■■□□□ 1.49
POLR2E-210ENST00000592597 IDI1Q13907 227 aa24.36■■□□□ 1.49
POLR2E-210ENST00000592597 ZNF772Q68DY9 489 aaPredicted RBP24.36■■□□□ 1.49
POLR2E-210ENST00000592597 DUOX2Q9NRD8 1548 aa24.34■■□□□ 1.49
POLR2E-210ENST00000592597 NWD1Q149M9 1564 aa24.33■■□□□ 1.48
POLR2E-210ENST00000592597 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
POLR2E-210ENST00000592597 RXRBP28702 533 aa24.31■■□□□ 1.48
POLR2E-210ENST00000592597 SPATA31A6Q5VVP1 1343 aa24.3■■□□□ 1.48
POLR2E-210ENST00000592597 CHD2O14647 1828 aaKnown RBP24.29■■□□□ 1.48
POLR2E-210ENST00000592597 RRP7BPQ9NSQ0 103 aa24.29■■□□□ 1.48
POLR2E-210ENST00000592597 KDM5AP29375 1690 aaKnown RBP24.28■■□□□ 1.48
POLR2E-210ENST00000592597 NUTM2BA6NNL0 878 aaPredicted RBP24.28■■□□□ 1.48
POLR2E-210ENST00000592597 NUTM2EB1AL46 878 aaPredicted RBP24.28■■□□□ 1.48
POLR2E-210ENST00000592597 NUTM2AQ8IVF1 878 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms