RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 SETD5Q9C0A6 1442 aa26.6■■□□□ 1.85
RDH13-221ENST00000592573 PLPPR3Q6T4P5 718 aa26.58■■□□□ 1.85
RDH13-221ENST00000592573 MROH1Q8NDA8 1641 aa26.58■■□□□ 1.85
RDH13-221ENST00000592573 RNF17Q9BXT8 1623 aaKnown RBP26.57■■□□□ 1.84
RDH13-221ENST00000592573 MADDQ8WXG6 1647 aa26.56■■□□□ 1.84
RDH13-221ENST00000592573 RAB3GAP2Q9H2M9 1393 aa26.56■■□□□ 1.84
RDH13-221ENST00000592573 ADAMTSL3P82987 1691 aa26.55■■□□□ 1.84
RDH13-221ENST00000592573 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
RDH13-221ENST00000592573 WASHC2CQ9Y4E1 1318 aa26.54■■□□□ 1.84
RDH13-221ENST00000592573 TRIM52Q96A61 297 aa26.54■■□□□ 1.84
RDH13-221ENST00000592573 DEPDC5O75140 1603 aa26.51■■□□□ 1.83
RDH13-221ENST00000592573 PRDM15P57071 1507 aaPredicted RBP26.51■■□□□ 1.83
RDH13-221ENST00000592573 NUP155O75694 1391 aa26.51■■□□□ 1.83
RDH13-221ENST00000592573 FER1L4A9Z1Z3 1794 aa26.49■■□□□ 1.83
RDH13-221ENST00000592573 CEBPAP49715 358 aaPredicted RBP26.49■■□□□ 1.83
RDH13-221ENST00000592573 KANK1Q14678 1352 aa26.49■■□□□ 1.83
RDH13-221ENST00000592573 RIMS1Q86UR5 1692 aaKnown RBP26.49■■□□□ 1.83
RDH13-221ENST00000592573 UNC13BO14795 1591 aa26.49■■□□□ 1.83
RDH13-221ENST00000592573 ABCC3O15438 1527 aa26.48■■□□□ 1.83
RDH13-221ENST00000592573 CLTCQ00610 1675 aaKnown RBP26.48■■□□□ 1.83
RDH13-221ENST00000592573 KDM5DQ9BY66 1539 aa26.47■■□□□ 1.83
RDH13-221ENST00000592573 PPP6R1Q9UPN7 881 aa26.46■■□□□ 1.83
RDH13-221ENST00000592573 CEP152O94986 1710 aa26.44■■□□□ 1.82
RDH13-221ENST00000592573 VWDEQ8N2E2 1590 aa26.44■■□□□ 1.82
RDH13-221ENST00000592573 ZMYM3Q14202 1370 aa26.43■■□□□ 1.82
RDH13-221ENST00000592573 CNTLNQ9NXG0 1405 aa26.42■■□□□ 1.82
RDH13-221ENST00000592573 PTPRMP28827 1452 aa26.41■■□□□ 1.82
RDH13-221ENST00000592573 FAM135AQ9P2D6 1515 aa26.4■■□□□ 1.82
RDH13-221ENST00000592573 PZPP20742 1482 aa26.38■■□□□ 1.81
RDH13-221ENST00000592573 FBXO31Q5XUX0 539 aaPredicted RBP26.38■■□□□ 1.81
RDH13-221ENST00000592573 IQGAP3Q86VI3 1631 aa26.38■■□□□ 1.81
RDH13-221ENST00000592573 SLC4A1APQ9BWU0 796 aaKnown RBP26.36■■□□□ 1.81
RDH13-221ENST00000592573 LMTK2Q8IWU2 1503 aa26.36■■□□□ 1.81
RDH13-221ENST00000592573 CAMSAP1Q5T5Y3 1602 aa26.36■■□□□ 1.81
RDH13-221ENST00000592573 ZC3H13Q5T200 1668 aaKnown RBP26.35■■□□□ 1.81
RDH13-221ENST00000592573 FOXD1Q16676 465 aa26.34■■□□□ 1.81
RDH13-221ENST00000592573 C3P01024 1663 aa26.33■■□□□ 1.81
RDH13-221ENST00000592573 MPHOSPH9Q99550 1183 aa26.33■■□□□ 1.81
RDH13-221ENST00000592573 NPATQ14207 1427 aa26.33■■□□□ 1.81
RDH13-221ENST00000592573 PKD2Q13563 968 aa26.32■■□□□ 1.8
RDH13-221ENST00000592573 EFCAB6Q5THR3 1501 aa26.32■■□□□ 1.8
RDH13-221ENST00000592573 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
RDH13-221ENST00000592573 HRCP23327 699 aa26.31■■□□□ 1.8
RDH13-221ENST00000592573 TET3O43151 1660 aa26.3■■□□□ 1.8
RDH13-221ENST00000592573 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
RDH13-221ENST00000592573 ARHGAP31Q2M1Z3 1444 aa26.27■■□□□ 1.8
RDH13-221ENST00000592573 E9PCH4 1651 aa26.26■■□□□ 1.79
RDH13-221ENST00000592573 ERVK-7P63135 1459 aa26.24■■□□□ 1.79
RDH13-221ENST00000592573 CFAP65Q6ZU64 1925 aaKnown RBP26.23■■□□□ 1.79
RDH13-221ENST00000592573 TNRQ92752 1358 aa26.21■■□□□ 1.79
RDH13-221ENST00000592573 ACIN1Q9UKV3 1341 aaKnown RBP26.21■■□□□ 1.79
RDH13-221ENST00000592573 PREX1Q8TCU6 1659 aa26.19■■□□□ 1.78
RDH13-221ENST00000592573 RPRD2Q5VT52 1461 aaKnown RBP26.18■■□□□ 1.78
RDH13-221ENST00000592573 SPATA31D1Q6ZQQ2 1576 aa26.17■■□□□ 1.78
RDH13-221ENST00000592573 NOS1P29475 1434 aa26.16■■□□□ 1.78
RDH13-221ENST00000592573 SYNMO15061 1565 aa26.16■■□□□ 1.78
RDH13-221ENST00000592573 UGGT1Q9NYU2 1555 aa26.15■■□□□ 1.78
RDH13-221ENST00000592573 PLA2R1Q13018 1463 aa26.14■■□□□ 1.78
RDH13-221ENST00000592573 DHX57Q6P158 1386 aaKnown RBP26.14■■□□□ 1.77
RDH13-221ENST00000592573 PTPRTO14522 1441 aa26.11■■□□□ 1.77
RDH13-221ENST00000592573 IDI1Q13907 227 aa26.11■■□□□ 1.77
RDH13-221ENST00000592573 MYO3AQ8NEV4 1616 aa26.08■■□□□ 1.77
RDH13-221ENST00000592573 SPHKAPQ2M3C7 1700 aa26.08■■□□□ 1.77
RDH13-221ENST00000592573 UHRF1BP1Q6BDS2 1440 aa26.08■■□□□ 1.77
RDH13-221ENST00000592573 CHGAP10645 457 aaKnown RBP26.06■■□□□ 1.76
RDH13-221ENST00000592573 TRPM2O94759 1503 aa26.05■■□□□ 1.76
RDH13-221ENST00000592573 HSPA2P54652 639 aa26.04■■□□□ 1.76
RDH13-221ENST00000592573 ANKRD30BQ9BXX2 1392 aa26.04■■□□□ 1.76
RDH13-221ENST00000592573 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
RDH13-221ENST00000592573 SLC52A1Q9NWF4 448 aa26.03■■□□□ 1.76
RDH13-221ENST00000592573 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
RDH13-221ENST00000592573 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
RDH13-221ENST00000592573 LMTK3Q96Q04 1460 aa26.02■■□□□ 1.76
RDH13-221ENST00000592573 CEP170BQ9Y4F5 1589 aaPredicted RBP26.02■■□□□ 1.76
RDH13-221ENST00000592573 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
RDH13-221ENST00000592573 PIK3C2BO00750 1634 aa26.01■■□□□ 1.75
RDH13-221ENST00000592573 CCDC144AA2RUR9 1427 aa25.99■■□□□ 1.75
RDH13-221ENST00000592573 SETD1BQ9UPS6 1966 aaKnown RBP25.98■■□□□ 1.75
RDH13-221ENST00000592573 SIN3AQ96ST3 1273 aa25.97■■□□□ 1.75
RDH13-221ENST00000592573 ZNF142P52746 1687 aaPredicted RBP25.94■■□□□ 1.74
RDH13-221ENST00000592573 ADGRB3O60242 1522 aa25.94■■□□□ 1.74
RDH13-221ENST00000592573 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
RDH13-221ENST00000592573 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
RDH13-221ENST00000592573 RGL3Q3MIN7 710 aa25.92■■□□□ 1.74
RDH13-221ENST00000592573 ZNF326Q5BKZ1 582 aaKnown RBP25.91■■□□□ 1.74
RDH13-221ENST00000592573 UBR1Q8IWV7 1749 aa25.91■■□□□ 1.74
RDH13-221ENST00000592573 TMEM131LA2VDJ0 1609 aa25.91■■□□□ 1.74
RDH13-221ENST00000592573 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
RDH13-221ENST00000592573 THEMISQ8N1K5 641 aaPredicted RBP25.91■■□□□ 1.74
RDH13-221ENST00000592573 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
RDH13-221ENST00000592573 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
RDH13-221ENST00000592573 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
RDH13-221ENST00000592573 TMEM2Q9UHN6 1383 aa25.85■■□□□ 1.73
RDH13-221ENST00000592573 SPATA31E1Q6ZUB1 1445 aa25.85■■□□□ 1.73
RDH13-221ENST00000592573 LTKP29376 864 aa25.84■■□□□ 1.73
RDH13-221ENST00000592573 RIMS2Q9UQ26 1411 aa25.82■■□□□ 1.72
RDH13-221ENST00000592573 KIF1BO60333 1816 aa25.82■■□□□ 1.72
RDH13-221ENST00000592573 TXNDC2Q86VQ3 553 aa25.81■■□□□ 1.72
RDH13-221ENST00000592573 KDM5AP29375 1690 aaKnown RBP25.79■■□□□ 1.72
RDH13-221ENST00000592573 ARHGAP23Q9P227 1491 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms