RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
TPM4-215ENST00000592138 CNTLNQ9NXG0 1405 aa14.78□□□□□ -0.04
TPM4-215ENST00000592138 RRP7BPQ9NSQ0 103 aa14.78□□□□□ -0.04
TPM4-215ENST00000592138 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
TPM4-215ENST00000592138 KIF3BO15066 747 aa14.76□□□□□ -0.05
TPM4-215ENST00000592138 MLECQ14165 292 aa14.76□□□□□ -0.05
TPM4-215ENST00000592138 ANKRD50Q9ULJ7 1429 aa14.75□□□□□ -0.05
TPM4-215ENST00000592138 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
TPM4-215ENST00000592138 PRDM15P57071 1507 aaPredicted RBP14.74□□□□□ -0.05
TPM4-215ENST00000592138 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
TPM4-215ENST00000592138 KDM5DQ9BY66 1539 aa14.73□□□□□ -0.05
TPM4-215ENST00000592138 MSH5O43196 834 aa14.73□□□□□ -0.05
TPM4-215ENST00000592138 ITGAEP38570 1179 aa14.73□□□□□ -0.05
TPM4-215ENST00000592138 GGT6Q6P531 493 aa14.73□□□□□ -0.05
TPM4-215ENST00000592138 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
TPM4-215ENST00000592138 MROH2AA6NES4 1674 aa14.72□□□□□ -0.05
TPM4-215ENST00000592138 ESF1Q9H501 851 aaKnown RBP14.72□□□□□ -0.05
TPM4-215ENST00000592138 MROH1Q8NDA8 1641 aa14.72□□□□□ -0.05
TPM4-215ENST00000592138 HFM1A2PYH4 1435 aa14.72□□□□□ -0.05
TPM4-215ENST00000592138 NAIPQ13075 1403 aa14.7□□□□□ -0.06
TPM4-215ENST00000592138 ZC3H13Q5T200 1668 aaKnown RBP14.7□□□□□ -0.06
TPM4-215ENST00000592138 VWDEQ8N2E2 1590 aa14.68□□□□□ -0.06
TPM4-215ENST00000592138 ABCC3O15438 1527 aa14.68□□□□□ -0.06
TPM4-215ENST00000592138 ZMYM3Q14202 1370 aa14.68□□□□□ -0.06
TPM4-215ENST00000592138 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
TPM4-215ENST00000592138 WASHC2CQ9Y4E1 1318 aa14.67□□□□□ -0.06
TPM4-215ENST00000592138 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
TPM4-215ENST00000592138 KANK1Q14678 1352 aa14.67□□□□□ -0.06
TPM4-215ENST00000592138 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
TPM4-215ENST00000592138 UNC13BO14795 1591 aa14.66□□□□□ -0.06
TPM4-215ENST00000592138 NPATQ14207 1427 aa14.66□□□□□ -0.06
TPM4-215ENST00000592138 PZPP20742 1482 aa14.65□□□□□ -0.06
TPM4-215ENST00000592138 ARHGAP31Q2M1Z3 1444 aa14.65□□□□□ -0.06
TPM4-215ENST00000592138 C3P01024 1663 aa14.65□□□□□ -0.06
TPM4-215ENST00000592138 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
TPM4-215ENST00000592138 ILDR2Q71H61 639 aa14.63□□□□□ -0.07
TPM4-215ENST00000592138 SOCS7O14512 581 aa14.61□□□□□ -0.07
TPM4-215ENST00000592138 CAMSAP1Q5T5Y3 1602 aa14.6□□□□□ -0.07
TPM4-215ENST00000592138 IQGAP3Q86VI3 1631 aa14.6□□□□□ -0.07
TPM4-215ENST00000592138 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
TPM4-215ENST00000592138 HSPA2P54652 639 aa14.6□□□□□ -0.07
TPM4-215ENST00000592138 CERKQ8TCT0 537 aa14.6□□□□□ -0.07
TPM4-215ENST00000592138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■□□□ 13.8
TPM4-215ENST00000592138 EFCAB6Q5THR3 1501 aa14.6□□□□□ -0.07
TPM4-215ENST00000592138 RPRD2Q5VT52 1461 aaKnown RBP14.59□□□□□ -0.07
TPM4-215ENST00000592138 CEP152O94986 1710 aa14.58□□□□□ -0.07
TPM4-215ENST00000592138 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
TPM4-215ENST00000592138 NUP155O75694 1391 aa14.58□□□□□ -0.08
TPM4-215ENST00000592138 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
TPM4-215ENST00000592138 TET3O43151 1660 aa14.57□□□□□ -0.08
TPM4-215ENST00000592138 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
TPM4-215ENST00000592138 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
TPM4-215ENST00000592138 DISP3Q9P2K9 1392 aa14.56□□□□□ -0.08
TPM4-215ENST00000592138 UHRF1BP1Q6BDS2 1440 aa14.56□□□□□ -0.08
TPM4-215ENST00000592138 ERVK-7P63135 1459 aa14.56□□□□□ -0.08
TPM4-215ENST00000592138 HRCP23327 699 aa14.55□□□□□ -0.08
TPM4-215ENST00000592138 TNRQ92752 1358 aa14.54□□□□□ -0.08
TPM4-215ENST00000592138 NLRP1Q9C000 1473 aa14.54□□□□□ -0.08
TPM4-215ENST00000592138 NOS1P29475 1434 aa14.53□□□□□ -0.08
TPM4-215ENST00000592138 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
TPM4-215ENST00000592138 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
TPM4-215ENST00000592138 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.08
TPM4-215ENST00000592138 RAB3GAP2Q9H2M9 1393 aa14.52□□□□□ -0.08
TPM4-215ENST00000592138 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
TPM4-215ENST00000592138 FBXO31Q5XUX0 539 aaPredicted RBP14.52□□□□□ -0.09
TPM4-215ENST00000592138 ZNF142P52746 1687 aaPredicted RBP14.51□□□□□ -0.09
TPM4-215ENST00000592138 A2ML1A8K2U0 1454 aa14.5□□□□□ -0.09
TPM4-215ENST00000592138 CEP170BQ9Y4F5 1589 aaPredicted RBP14.5□□□□□ -0.09
TPM4-215ENST00000592138 E9PCH4 1651 aa14.49□□□□□ -0.09
TPM4-215ENST00000592138 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
TPM4-215ENST00000592138 PTPRTO14522 1441 aa14.48□□□□□ -0.09
TPM4-215ENST00000592138 SLC52A1Q9NWF4 448 aa14.47□□□□□ -0.09
TPM4-215ENST00000592138 SYNMO15061 1565 aa14.47□□□□□ -0.09
TPM4-215ENST00000592138 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
TPM4-215ENST00000592138 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
TPM4-215ENST00000592138 UGGT1Q9NYU2 1555 aa14.44□□□□□ -0.1
TPM4-215ENST00000592138 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
TPM4-215ENST00000592138 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
TPM4-215ENST00000592138 TRPM2O94759 1503 aa14.43□□□□□ -0.1
TPM4-215ENST00000592138 PKD2Q13563 968 aa14.43□□□□□ -0.1
TPM4-215ENST00000592138 PIK3C2BO00750 1634 aa14.43□□□□□ -0.1
TPM4-215ENST00000592138 LTBP4Q8N2S1 1624 aa14.43□□□□□ -0.1
TPM4-215ENST00000592138 THEMISQ8N1K5 641 aaPredicted RBP14.42□□□□□ -0.1
TPM4-215ENST00000592138 IDI1Q13907 227 aa14.41□□□□□ -0.1
TPM4-215ENST00000592138 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
TPM4-215ENST00000592138 ADGRB3O60242 1522 aa14.41□□□□□ -0.1
TPM4-215ENST00000592138 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
TPM4-215ENST00000592138 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
TPM4-215ENST00000592138 UBR1Q8IWV7 1749 aa14.39□□□□□ -0.11
TPM4-215ENST00000592138 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
TPM4-215ENST00000592138 SLIT1O75093 1534 aa14.38□□□□□ -0.11
TPM4-215ENST00000592138 TMEM2Q9UHN6 1383 aa14.35□□□□□ -0.11
TPM4-215ENST00000592138 TMEM131LA2VDJ0 1609 aa14.35□□□□□ -0.11
TPM4-215ENST00000592138 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
TPM4-215ENST00000592138 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
TPM4-215ENST00000592138 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
TPM4-215ENST00000592138 CLTCL1P53675 1640 aa14.34□□□□□ -0.11
TPM4-215ENST00000592138 CCDC144AA2RUR9 1427 aa14.33□□□□□ -0.11
TPM4-215ENST00000592138 MED14O60244 1454 aa14.33□□□□□ -0.12
TPM4-215ENST00000592138 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms