RNA–Protein interactions for RNA: ENST00000591678.1

APBA3-207, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-207ENST00000591678 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
APBA3-207ENST00000591678 STRCP1A6NGW2 1772 aa16.01■□□□□ 0.15
APBA3-207ENST00000591678 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
APBA3-207ENST00000591678 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
APBA3-207ENST00000591678 TOM1O60784 492 aa16■□□□□ 0.15
APBA3-207ENST00000591678 CPS1P31327 1500 aa15.99■□□□□ 0.15
APBA3-207ENST00000591678 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
APBA3-207ENST00000591678 TNRQ92752 1358 aa15.98■□□□□ 0.15
APBA3-207ENST00000591678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
APBA3-207ENST00000591678 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
APBA3-207ENST00000591678 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
APBA3-207ENST00000591678 KIF3BO15066 747 aa15.96■□□□□ 0.15
APBA3-207ENST00000591678 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
APBA3-207ENST00000591678 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
APBA3-207ENST00000591678 DHX29Q7Z478 1369 aaKnown RBP15.94■□□□□ 0.14
APBA3-207ENST00000591678 PZPP20742 1482 aa15.93■□□□□ 0.14
APBA3-207ENST00000591678 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
APBA3-207ENST00000591678 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
APBA3-207ENST00000591678 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
APBA3-207ENST00000591678 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
APBA3-207ENST00000591678 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
APBA3-207ENST00000591678 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
APBA3-207ENST00000591678 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
APBA3-207ENST00000591678 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
APBA3-207ENST00000591678 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
APBA3-207ENST00000591678 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
APBA3-207ENST00000591678 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
APBA3-207ENST00000591678 MED14O60244 1454 aa15.88■□□□□ 0.13
APBA3-207ENST00000591678 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
APBA3-207ENST00000591678 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
APBA3-207ENST00000591678 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
APBA3-207ENST00000591678 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
APBA3-207ENST00000591678 RGS17Q9UGC6 210 aaPredicted RBP15.86■□□□□ 0.13
APBA3-207ENST00000591678 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
APBA3-207ENST00000591678 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
APBA3-207ENST00000591678 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
APBA3-207ENST00000591678 NLRP1Q9C000 1473 aa15.85■□□□□ 0.13
APBA3-207ENST00000591678 CEP152O94986 1710 aa15.84■□□□□ 0.13
APBA3-207ENST00000591678 CEP162Q5TB80 1403 aa15.83■□□□□ 0.12
APBA3-207ENST00000591678 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
APBA3-207ENST00000591678 SYNMO15061 1565 aa15.82■□□□□ 0.12
APBA3-207ENST00000591678 ABCC3O15438 1527 aa15.81■□□□□ 0.12
APBA3-207ENST00000591678 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
APBA3-207ENST00000591678 MROH1Q8NDA8 1641 aa15.78■□□□□ 0.12
APBA3-207ENST00000591678 ARHGEF5Q12774 1597 aa15.78■□□□□ 0.12
APBA3-207ENST00000591678 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
APBA3-207ENST00000591678 LTKP29376 864 aa15.77■□□□□ 0.12
APBA3-207ENST00000591678 SETD1AO15047 1707 aaKnown RBP15.76■□□□□ 0.11
APBA3-207ENST00000591678 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
APBA3-207ENST00000591678 SCAF11Q99590 1463 aaKnown RBP15.74■□□□□ 0.11
APBA3-207ENST00000591678 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
APBA3-207ENST00000591678 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
APBA3-207ENST00000591678 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
APBA3-207ENST00000591678 TXNDC2Q86VQ3 553 aa15.72■□□□□ 0.11
APBA3-207ENST00000591678 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
APBA3-207ENST00000591678 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
APBA3-207ENST00000591678 PIK3C2BO00750 1634 aa15.71■□□□□ 0.11
APBA3-207ENST00000591678 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
APBA3-207ENST00000591678 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
APBA3-207ENST00000591678 ARHGAP23Q9P227 1491 aa15.7■□□□□ 0.1
APBA3-207ENST00000591678 SLIT1O75093 1534 aa15.68■□□□□ 0.1
APBA3-207ENST00000591678 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
APBA3-207ENST00000591678 TMEM94Q12767 1356 aa15.65■□□□□ 0.1
APBA3-207ENST00000591678 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
APBA3-207ENST00000591678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
APBA3-207ENST00000591678 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
APBA3-207ENST00000591678 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
APBA3-207ENST00000591678 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
APBA3-207ENST00000591678 MYO5BQ9ULV0 1848 aa15.6■□□□□ 0.09
APBA3-207ENST00000591678 PROSER2Q86WR7 435 aaPredicted RBP15.6■□□□□ 0.09
APBA3-207ENST00000591678 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
APBA3-207ENST00000591678 TET3O43151 1660 aa15.6■□□□□ 0.09
APBA3-207ENST00000591678 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
APBA3-207ENST00000591678 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
APBA3-207ENST00000591678 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
APBA3-207ENST00000591678 EFCAB6Q5THR3 1501 aa15.58■□□□□ 0.09
APBA3-207ENST00000591678 KCNA6P17658 529 aa15.58■□□□□ 0.08
APBA3-207ENST00000591678 IDI1Q13907 227 aa15.57■□□□□ 0.08
APBA3-207ENST00000591678 KIF15Q9NS87 1388 aa15.57■□□□□ 0.08
APBA3-207ENST00000591678 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
APBA3-207ENST00000591678 KDM5AP29375 1690 aaKnown RBP15.55■□□□□ 0.08
APBA3-207ENST00000591678 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
APBA3-207ENST00000591678 CHD2O14647 1828 aaKnown RBP15.54■□□□□ 0.08
APBA3-207ENST00000591678 ABCC5O15440 1437 aa15.54■□□□□ 0.08
APBA3-207ENST00000591678 LRP6O75581 1613 aa15.53■□□□□ 0.08
APBA3-207ENST00000591678 COL16A1Q07092 1604 aaPredicted RBP15.53■□□□□ 0.08
APBA3-207ENST00000591678 ERBINQ96RT1 1412 aa15.52■□□□□ 0.08
APBA3-207ENST00000591678 BCANQ96GW7 911 aa15.52■□□□□ 0.08
APBA3-207ENST00000591678 SLAIN2Q9P270 581 aa15.52■□□□□ 0.08
APBA3-207ENST00000591678 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
APBA3-207ENST00000591678 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
APBA3-207ENST00000591678 ADGRB3O60242 1522 aa15.51■□□□□ 0.07
APBA3-207ENST00000591678 NKTRP30414 1462 aaKnown RBP15.51■□□□□ 0.07
APBA3-207ENST00000591678 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
APBA3-207ENST00000591678 MSH6P52701 1360 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms