RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
VPS4B-207ENST00000591519 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
VPS4B-207ENST00000591519 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
VPS4B-207ENST00000591519 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
VPS4B-207ENST00000591519 A2MP01023 1474 aa16.64■□□□□ 0.25
VPS4B-207ENST00000591519 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
VPS4B-207ENST00000591519 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
VPS4B-207ENST00000591519 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
VPS4B-207ENST00000591519 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
VPS4B-207ENST00000591519 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
VPS4B-207ENST00000591519 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
VPS4B-207ENST00000591519 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
VPS4B-207ENST00000591519 NPATQ14207 1427 aa16.62■□□□□ 0.25
VPS4B-207ENST00000591519 MROH2AA6NES4 1674 aa16.61■□□□□ 0.25
VPS4B-207ENST00000591519 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
VPS4B-207ENST00000591519 PTPRTO14522 1441 aa16.59■□□□□ 0.25
VPS4B-207ENST00000591519 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
VPS4B-207ENST00000591519 GGT6Q6P531 493 aa16.58■□□□□ 0.24
VPS4B-207ENST00000591519 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
VPS4B-207ENST00000591519 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
VPS4B-207ENST00000591519 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
VPS4B-207ENST00000591519 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
VPS4B-207ENST00000591519 PTPRKQ15262 1439 aa16.53■□□□□ 0.24
VPS4B-207ENST00000591519 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
VPS4B-207ENST00000591519 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
VPS4B-207ENST00000591519 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
VPS4B-207ENST00000591519 CAMSAP2Q08AD1 1489 aa16.51■□□□□ 0.23
VPS4B-207ENST00000591519 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
VPS4B-207ENST00000591519 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
VPS4B-207ENST00000591519 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
VPS4B-207ENST00000591519 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
VPS4B-207ENST00000591519 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
VPS4B-207ENST00000591519 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
VPS4B-207ENST00000591519 KIF3BO15066 747 aa16.49■□□□□ 0.23
VPS4B-207ENST00000591519 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
VPS4B-207ENST00000591519 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
VPS4B-207ENST00000591519 PKD2Q13563 968 aa16.47■□□□□ 0.23
VPS4B-207ENST00000591519 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
VPS4B-207ENST00000591519 LTBP4Q8N2S1 1624 aa16.46■□□□□ 0.23
VPS4B-207ENST00000591519 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
VPS4B-207ENST00000591519 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
VPS4B-207ENST00000591519 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
VPS4B-207ENST00000591519 ZNF142P52746 1687 aaPredicted RBP16.45■□□□□ 0.22
VPS4B-207ENST00000591519 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
VPS4B-207ENST00000591519 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
VPS4B-207ENST00000591519 WASHC2CQ9Y4E1 1318 aa16.44■□□□□ 0.22
VPS4B-207ENST00000591519 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
VPS4B-207ENST00000591519 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
VPS4B-207ENST00000591519 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
VPS4B-207ENST00000591519 FBXO31Q5XUX0 539 aaPredicted RBP16.42■□□□□ 0.22
VPS4B-207ENST00000591519 A2ML1A8K2U0 1454 aa16.42■□□□□ 0.22
VPS4B-207ENST00000591519 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
VPS4B-207ENST00000591519 PZPP20742 1482 aa16.41■□□□□ 0.22
VPS4B-207ENST00000591519 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
VPS4B-207ENST00000591519 MAST1Q9Y2H9 1570 aa16.4■□□□□ 0.22
VPS4B-207ENST00000591519 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
VPS4B-207ENST00000591519 TNRQ92752 1358 aa16.39■□□□□ 0.21
VPS4B-207ENST00000591519 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
VPS4B-207ENST00000591519 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
VPS4B-207ENST00000591519 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
VPS4B-207ENST00000591519 NLRP1Q9C000 1473 aa16.34■□□□□ 0.21
VPS4B-207ENST00000591519 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
VPS4B-207ENST00000591519 EIF2AK4Q9P2K8 1649 aaKnown RBP16.33■□□□□ 0.2
VPS4B-207ENST00000591519 ANKLE2Q86XL3 938 aa16.32■□□□□ 0.2
VPS4B-207ENST00000591519 ABCC3O15438 1527 aa16.3■□□□□ 0.2
VPS4B-207ENST00000591519 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
VPS4B-207ENST00000591519 ABCC5O15440 1437 aa16.3■□□□□ 0.2
VPS4B-207ENST00000591519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS4B-207ENST00000591519 ZC3H13Q5T200 1668 aaKnown RBP16.29■□□□□ 0.2
VPS4B-207ENST00000591519 MROH1Q8NDA8 1641 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 UGGT1Q9NYU2 1555 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 MED14O60244 1454 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
VPS4B-207ENST00000591519 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
VPS4B-207ENST00000591519 POLR1AO95602 1720 aaPredicted RBP16.27■□□□□ 0.19
VPS4B-207ENST00000591519 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
VPS4B-207ENST00000591519 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
VPS4B-207ENST00000591519 UBAP1LF5GYI3 381 aa16.26■□□□□ 0.19
VPS4B-207ENST00000591519 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
VPS4B-207ENST00000591519 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
VPS4B-207ENST00000591519 DEPDC5O75140 1603 aa16.25■□□□□ 0.19
VPS4B-207ENST00000591519 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
VPS4B-207ENST00000591519 FGD6Q6ZV73 1430 aa16.25■□□□□ 0.19
VPS4B-207ENST00000591519 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
VPS4B-207ENST00000591519 PIP4P2Q8N4L2 257 aa16.24■□□□□ 0.19
VPS4B-207ENST00000591519 DAPK1P53355 1430 aa16.24■□□□□ 0.19
VPS4B-207ENST00000591519 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
VPS4B-207ENST00000591519 CPS1P31327 1500 aa16.23■□□□□ 0.19
VPS4B-207ENST00000591519 CROCC2H7BZ55 1655 aa16.22■□□□□ 0.19
VPS4B-207ENST00000591519 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
VPS4B-207ENST00000591519 DISP3Q9P2K9 1392 aa16.21■□□□□ 0.19
VPS4B-207ENST00000591519 CEP152O94986 1710 aa16.2■□□□□ 0.18
VPS4B-207ENST00000591519 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
VPS4B-207ENST00000591519 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
VPS4B-207ENST00000591519 VWDEQ8N2E2 1590 aa16.2■□□□□ 0.18
VPS4B-207ENST00000591519 TOM1O60784 492 aa16.19■□□□□ 0.18
VPS4B-207ENST00000591519 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
VPS4B-207ENST00000591519 KANK1Q14678 1352 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms