RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 CNTLNQ9NXG0 1405 aa22.44■■□□□ 1.18
PKN1-213ENST00000591461 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
PKN1-213ENST00000591461 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
PKN1-213ENST00000591461 CLTCQ00610 1675 aaKnown RBP22.41■■□□□ 1.18
PKN1-213ENST00000591461 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
PKN1-213ENST00000591461 C3P01024 1663 aa22.4■■□□□ 1.18
PKN1-213ENST00000591461 ADGRL2O95490 1459 aa22.35■■□□□ 1.17
PKN1-213ENST00000591461 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
PKN1-213ENST00000591461 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
PKN1-213ENST00000591461 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
PKN1-213ENST00000591461 UHRF1BP1Q6BDS2 1440 aa22.32■■□□□ 1.16
PKN1-213ENST00000591461 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
PKN1-213ENST00000591461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKN1-213ENST00000591461 ABCC3O15438 1527 aa22.31■■□□□ 1.16
PKN1-213ENST00000591461 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
PKN1-213ENST00000591461 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
PKN1-213ENST00000591461 MROH2AA6NES4 1674 aa22.28■■□□□ 1.16
PKN1-213ENST00000591461 NPATQ14207 1427 aa22.28■■□□□ 1.16
PKN1-213ENST00000591461 EIF2AK4Q9P2K8 1649 aaKnown RBP22.27■■□□□ 1.16
PKN1-213ENST00000591461 ROCK1Q13464 1354 aa22.26■■□□□ 1.15
PKN1-213ENST00000591461 TNRQ92752 1358 aa22.25■■□□□ 1.15
PKN1-213ENST00000591461 PZPP20742 1482 aa22.25■■□□□ 1.15
PKN1-213ENST00000591461 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
PKN1-213ENST00000591461 KANK1Q14678 1352 aa22.22■■□□□ 1.15
PKN1-213ENST00000591461 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
PKN1-213ENST00000591461 NCKAP5LQ9HCH0 1330 aa22.21■■□□□ 1.15
PKN1-213ENST00000591461 CEP152O94986 1710 aa22.2■■□□□ 1.14
PKN1-213ENST00000591461 FAM135AQ9P2D6 1515 aa22.17■■□□□ 1.14
PKN1-213ENST00000591461 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
PKN1-213ENST00000591461 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
PKN1-213ENST00000591461 MYO3AQ8NEV4 1616 aa22.15■■□□□ 1.14
PKN1-213ENST00000591461 SETD1BQ9UPS6 1966 aaKnown RBP22.15■■□□□ 1.14
PKN1-213ENST00000591461 VWDEQ8N2E2 1590 aa22.15■■□□□ 1.14
PKN1-213ENST00000591461 CAMSAP1Q5T5Y3 1602 aa22.14■■□□□ 1.14
PKN1-213ENST00000591461 NAIPQ13075 1403 aa22.14■■□□□ 1.13
PKN1-213ENST00000591461 NUP155O75694 1391 aa22.13■■□□□ 1.13
PKN1-213ENST00000591461 A2ML1A8K2U0 1454 aa22.13■■□□□ 1.13
PKN1-213ENST00000591461 CEP170BQ9Y4F5 1589 aaPredicted RBP22.12■■□□□ 1.13
PKN1-213ENST00000591461 ARHGAP31Q2M1Z3 1444 aa22.12■■□□□ 1.13
PKN1-213ENST00000591461 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
PKN1-213ENST00000591461 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
PKN1-213ENST00000591461 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
PKN1-213ENST00000591461 STRCQ7RTU9 1775 aa22.08■■□□□ 1.13
PKN1-213ENST00000591461 IDI1Q13907 227 aa22.08■■□□□ 1.13
PKN1-213ENST00000591461 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
PKN1-213ENST00000591461 CFAP65Q6ZU64 1925 aaKnown RBP22.07■■□□□ 1.12
PKN1-213ENST00000591461 NLRP1Q9C000 1473 aa22.05■■□□□ 1.12
PKN1-213ENST00000591461 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
PKN1-213ENST00000591461 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
PKN1-213ENST00000591461 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
PKN1-213ENST00000591461 UNC13BO14795 1591 aa22.04■■□□□ 1.12
PKN1-213ENST00000591461 NOS1P29475 1434 aa22.03■■□□□ 1.12
PKN1-213ENST00000591461 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
PKN1-213ENST00000591461 ZNF142P52746 1687 aaPredicted RBP22.02■■□□□ 1.12
PKN1-213ENST00000591461 DMRT2Q9Y5R5 561 aa22.02■■□□□ 1.12
PKN1-213ENST00000591461 PKD2Q13563 968 aa22.01■■□□□ 1.11
PKN1-213ENST00000591461 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
PKN1-213ENST00000591461 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
PKN1-213ENST00000591461 SYNMO15061 1565 aa21.99■■□□□ 1.11
PKN1-213ENST00000591461 LTKP29376 864 aa21.99■■□□□ 1.11
PKN1-213ENST00000591461 ANKLE2Q86XL3 938 aa21.99■■□□□ 1.11
PKN1-213ENST00000591461 PTPRTO14522 1441 aa21.98■■□□□ 1.11
PKN1-213ENST00000591461 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
PKN1-213ENST00000591461 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
PKN1-213ENST00000591461 FOXD1Q16676 465 aa21.97■■□□□ 1.11
PKN1-213ENST00000591461 ZNF335Q9H4Z2 1342 aaPredicted RBP21.96■■□□□ 1.11
PKN1-213ENST00000591461 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
PKN1-213ENST00000591461 TET3O43151 1660 aa21.95■■□□□ 1.1
PKN1-213ENST00000591461 TXNDC2Q86VQ3 553 aa21.95■■□□□ 1.1
PKN1-213ENST00000591461 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
PKN1-213ENST00000591461 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
PKN1-213ENST00000591461 SLC52A1Q9NWF4 448 aa21.93■■□□□ 1.1
PKN1-213ENST00000591461 E9PCH4 1651 aa21.92■■□□□ 1.1
PKN1-213ENST00000591461 PIK3C2BO00750 1634 aa21.92■■□□□ 1.1
PKN1-213ENST00000591461 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
PKN1-213ENST00000591461 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
PKN1-213ENST00000591461 ILDR1Q86SU0 546 aaPredicted RBP21.91■■□□□ 1.1
PKN1-213ENST00000591461 CERKQ8TCT0 537 aa21.91■■□□□ 1.1
PKN1-213ENST00000591461 NEURL4Q96JN8 1562 aa21.9■■□□□ 1.1
PKN1-213ENST00000591461 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
PKN1-213ENST00000591461 TMEM2Q9UHN6 1383 aa21.89■■□□□ 1.1
PKN1-213ENST00000591461 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
PKN1-213ENST00000591461 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.09
PKN1-213ENST00000591461 ARHGAP23Q9P227 1491 aa21.86■■□□□ 1.09
PKN1-213ENST00000591461 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
PKN1-213ENST00000591461 RAB3GAP2Q9H2M9 1393 aa21.86■■□□□ 1.09
PKN1-213ENST00000591461 EID1Q9Y6B2 187 aa21.85■■□□□ 1.09
PKN1-213ENST00000591461 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.09
PKN1-213ENST00000591461 ADGRB3O60242 1522 aa21.83■■□□□ 1.09
PKN1-213ENST00000591461 SLIT1O75093 1534 aa21.83■■□□□ 1.09
PKN1-213ENST00000591461 SLC26A8Q96RN1 970 aa21.82■■□□□ 1.08
PKN1-213ENST00000591461 MED14O60244 1454 aa21.82■■□□□ 1.08
PKN1-213ENST00000591461 LTBP4Q8N2S1 1624 aa21.81■■□□□ 1.08
PKN1-213ENST00000591461 BCANQ96GW7 911 aa21.8■■□□□ 1.08
PKN1-213ENST00000591461 RIMS2Q9UQ26 1411 aa21.8■■□□□ 1.08
PKN1-213ENST00000591461 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
PKN1-213ENST00000591461 PPP1R15AO75807 674 aaPredicted RBP21.77■■□□□ 1.08
PKN1-213ENST00000591461 ZNF326Q5BKZ1 582 aaKnown RBP21.77■■□□□ 1.08
PKN1-213ENST00000591461 ZFYVE9O95405 1425 aa21.77■■□□□ 1.08
PKN1-213ENST00000591461 POLR1AO95602 1720 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms