RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
VPS4B-205ENST00000591383 RICTORQ6R327 1708 aa9.92□□□□□ -0.82
VPS4B-205ENST00000591383 MYOM3Q5VTT5 1437 aa9.91□□□□□ -0.82
VPS4B-205ENST00000591383 AKNAQ7Z591 1439 aa9.9□□□□□ -0.82
VPS4B-205ENST00000591383 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
VPS4B-205ENST00000591383 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
VPS4B-205ENST00000591383 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
VPS4B-205ENST00000591383 POGZQ7Z3K3 1410 aa9.89□□□□□ -0.83
VPS4B-205ENST00000591383 ARHGEF40Q8TER5 1519 aa9.88□□□□□ -0.83
VPS4B-205ENST00000591383 CROCC2H7BZ55 1655 aa9.88□□□□□ -0.83
VPS4B-205ENST00000591383 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-205ENST00000591383 PLEKHH2Q8IVE3 1493 aa9.88□□□□□ -0.83
VPS4B-205ENST00000591383 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-205ENST00000591383 CFDP1Q9UEE9 299 aaPredicted RBP9.88□□□□□ -0.83
VPS4B-205ENST00000591383 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
VPS4B-205ENST00000591383 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
VPS4B-205ENST00000591383 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
VPS4B-205ENST00000591383 STK25O00506 426 aa9.87□□□□□ -0.83
VPS4B-205ENST00000591383 EFCAB2Q5VUJ9 269 aa9.87□□□□□ -0.83
VPS4B-205ENST00000591383 SCAPERQ9BY12 1400 aa9.87□□□□□ -0.83
VPS4B-205ENST00000591383 ZNF518AQ6AHZ1 1483 aa9.86□□□□□ -0.83
VPS4B-205ENST00000591383 COL17A1Q9UMD9 1497 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-205ENST00000591383 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
VPS4B-205ENST00000591383 KDM5CP41229 1560 aa9.86□□□□□ -0.83
VPS4B-205ENST00000591383 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
VPS4B-205ENST00000591383 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
VPS4B-205ENST00000591383 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
VPS4B-205ENST00000591383 MIA2Q96PC5 1412 aa9.85□□□□□ -0.83
VPS4B-205ENST00000591383 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
VPS4B-205ENST00000591383 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
VPS4B-205ENST00000591383 ZFYVE16Q7Z3T8 1539 aa9.85□□□□□ -0.83
VPS4B-205ENST00000591383 ARHGEF12Q9NZN5 1544 aa9.85□□□□□ -0.83
VPS4B-205ENST00000591383 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
VPS4B-205ENST00000591383 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
VPS4B-205ENST00000591383 CACNB1Q02641 598 aaPredicted RBP9.84□□□□□ -0.83
VPS4B-205ENST00000591383 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
VPS4B-205ENST00000591383 ABCA6Q8N139 1617 aa9.84□□□□□ -0.83
VPS4B-205ENST00000591383 ZNF644Q9H582 1327 aaPredicted RBP9.83□□□□□ -0.84
VPS4B-205ENST00000591383 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
VPS4B-205ENST00000591383 ATP7AQ04656 1500 aa9.83□□□□□ -0.84
VPS4B-205ENST00000591383 TCOF1Q13428 1488 aaKnown RBP9.83□□□□□ -0.84
VPS4B-205ENST00000591383 ADGBQ8N7X0 1667 aa9.83□□□□□ -0.84
VPS4B-205ENST00000591383 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
VPS4B-205ENST00000591383 SGIP1Q9BQI5 828 aa9.82□□□□□ -0.84
VPS4B-205ENST00000591383 DIP2CQ9Y2E4 1556 aa9.82□□□□□ -0.84
VPS4B-205ENST00000591383 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
VPS4B-205ENST00000591383 KIDINS220Q9ULH0 1771 aa9.81□□□□□ -0.84
VPS4B-205ENST00000591383 PRR29P0C7W0 189 aa9.81□□□□□ -0.84
VPS4B-205ENST00000591383 FAM50AQ14320 339 aaKnown RBP9.81□□□□□ -0.84
VPS4B-205ENST00000591383 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
VPS4B-205ENST00000591383 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
VPS4B-205ENST00000591383 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
VPS4B-205ENST00000591383 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
VPS4B-205ENST00000591383 YEATS2Q9ULM3 1422 aa9.8□□□□□ -0.84
VPS4B-205ENST00000591383 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
VPS4B-205ENST00000591383 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
VPS4B-205ENST00000591383 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
VPS4B-205ENST00000591383 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS4B-205ENST00000591383 DAPK1P53355 1430 aa9.79□□□□□ -0.84
VPS4B-205ENST00000591383 C9orf84Q5VXU9 1444 aa9.79□□□□□ -0.84
VPS4B-205ENST00000591383 PLXNC1O60486 1568 aa9.79□□□□□ -0.84
VPS4B-205ENST00000591383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-205ENST00000591383 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-205ENST00000591383 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
VPS4B-205ENST00000591383 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
VPS4B-205ENST00000591383 SPAG9O60271 1321 aaKnown RBP9.78□□□□□ -0.84
VPS4B-205ENST00000591383 MAGI2Q86UL8 1455 aa9.78□□□□□ -0.84
VPS4B-205ENST00000591383 SIGLEC1Q9BZZ2 1709 aa9.77□□□□□ -0.85
VPS4B-205ENST00000591383 RRBP1Q9P2E9 1410 aaKnown RBP9.77□□□□□ -0.85
VPS4B-205ENST00000591383 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
VPS4B-205ENST00000591383 MLH3Q9UHC1 1453 aa9.77□□□□□ -0.85
VPS4B-205ENST00000591383 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
VPS4B-205ENST00000591383 ABCC5O15440 1437 aa9.75□□□□□ -0.85
VPS4B-205ENST00000591383 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
VPS4B-205ENST00000591383 PYGBP11216 843 aa9.74□□□□□ -0.85
VPS4B-205ENST00000591383 ITGAEP38570 1179 aa9.74□□□□□ -0.85
VPS4B-205ENST00000591383 REREQ9P2R6 1566 aa9.74□□□□□ -0.85
VPS4B-205ENST00000591383 REM2Q8IYK8 340 aaPredicted RBP9.73□□□□□ -0.85
VPS4B-205ENST00000591383 GCC2Q8IWJ2 1684 aa9.73□□□□□ -0.85
VPS4B-205ENST00000591383 ATP10AO60312 1499 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 A2MP01023 1474 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 BCORL1Q5H9F3 1711 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 FER1L4A9Z1Z3 1794 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 KIF15Q9NS87 1388 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 RTEL1-TNFRSF6BF6WH68 1400 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 ADGRL2O95490 1459 aa9.72□□□□□ -0.85
VPS4B-205ENST00000591383 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
VPS4B-205ENST00000591383 TSPY4P0CV99 314 aa9.71□□□□□ -0.86
VPS4B-205ENST00000591383 TSPY10P0CW01 314 aa9.71□□□□□ -0.86
VPS4B-205ENST00000591383 CHIC2Q9UKJ5 165 aa9.71□□□□□ -0.86
VPS4B-205ENST00000591383 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
VPS4B-205ENST00000591383 DUOX2Q9NRD8 1548 aa9.71□□□□□ -0.86
VPS4B-205ENST00000591383 MADDQ8WXG6 1647 aa9.71□□□□□ -0.86
VPS4B-205ENST00000591383 ANKRD30AQ9BXX3 1397 aa9.7□□□□□ -0.86
VPS4B-205ENST00000591383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS4B-205ENST00000591383 RIMS1Q86UR5 1692 aaKnown RBP9.7□□□□□ -0.86
VPS4B-205ENST00000591383 PTPRKQ15262 1439 aa9.69□□□□□ -0.86
VPS4B-205ENST00000591383 RNF17Q9BXT8 1623 aaKnown RBP9.69□□□□□ -0.86
VPS4B-205ENST00000591383 AGLP35573 1532 aa9.68□□□□□ -0.86
VPS4B-205ENST00000591383 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms