RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 RNF17Q9BXT8 1623 aaKnown RBP32.57■■■□□ 2.81
CROCCP3-206ENST00000591348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.56■■■□□ 2.85e-7■■□□□ 12.5
CROCCP3-206ENST00000591348 DEPDC5O75140 1603 aa32.54■■■□□ 2.8
CROCCP3-206ENST00000591348 HRCP23327 699 aa32.53■■■□□ 2.8
CROCCP3-206ENST00000591348 TRIM52Q96A61 297 aa32.53■■■□□ 2.8
CROCCP3-206ENST00000591348 UNC13BO14795 1591 aa32.53■■■□□ 2.8
CROCCP3-206ENST00000591348 ACIN1Q9UKV3 1341 aaKnown RBP32.53■■■□□ 2.8
CROCCP3-206ENST00000591348 PRDM15P57071 1507 aaPredicted RBP32.51■■■□□ 2.8
CROCCP3-206ENST00000591348 MROH1Q8NDA8 1641 aa32.51■■■□□ 2.8
CROCCP3-206ENST00000591348 KANK1Q14678 1352 aa32.51■■■□□ 2.79
CROCCP3-206ENST00000591348 NUP155O75694 1391 aa32.5■■■□□ 2.79
CROCCP3-206ENST00000591348 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
CROCCP3-206ENST00000591348 ESF1Q9H501 851 aaKnown RBP32.44■■■□□ 2.78
CROCCP3-206ENST00000591348 WASHC2CQ9Y4E1 1318 aa32.44■■■□□ 2.78
CROCCP3-206ENST00000591348 VWDEQ8N2E2 1590 aa32.41■■■□□ 2.78
CROCCP3-206ENST00000591348 KDM5DQ9BY66 1539 aa32.41■■■□□ 2.78
CROCCP3-206ENST00000591348 FAM135AQ9P2D6 1515 aa32.41■■■□□ 2.78
CROCCP3-206ENST00000591348 IQGAP3Q86VI3 1631 aa32.4■■■□□ 2.78
CROCCP3-206ENST00000591348 ABCC3O15438 1527 aa32.38■■■□□ 2.77
CROCCP3-206ENST00000591348 ZC3H13Q5T200 1668 aaKnown RBP32.37■■■□□ 2.77
CROCCP3-206ENST00000591348 CEP152O94986 1710 aa32.36■■■□□ 2.77
CROCCP3-206ENST00000591348 FER1L4A9Z1Z3 1794 aa32.35■■■□□ 2.77
CROCCP3-206ENST00000591348 SLC4A1APQ9BWU0 796 aaKnown RBP32.35■■■□□ 2.77
CROCCP3-206ENST00000591348 ADAMTSL3P82987 1691 aa32.35■■■□□ 2.77
CROCCP3-206ENST00000591348 PZPP20742 1482 aa32.35■■■□□ 2.77
CROCCP3-206ENST00000591348 CNTLNQ9NXG0 1405 aa32.34■■■□□ 2.77
CROCCP3-206ENST00000591348 LMTK2Q8IWU2 1503 aa32.34■■■□□ 2.77
CROCCP3-206ENST00000591348 CLTCQ00610 1675 aaKnown RBP32.33■■■□□ 2.77
CROCCP3-206ENST00000591348 MADDQ8WXG6 1647 aa32.32■■■□□ 2.76
CROCCP3-206ENST00000591348 MPHOSPH9Q99550 1183 aa32.31■■■□□ 2.76
CROCCP3-206ENST00000591348 TET3O43151 1660 aa32.3■■■□□ 2.76
CROCCP3-206ENST00000591348 CAMSAP1Q5T5Y3 1602 aa32.28■■■□□ 2.76
CROCCP3-206ENST00000591348 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.75
CROCCP3-206ENST00000591348 PKD2Q13563 968 aa32.25■■■□□ 2.75
CROCCP3-206ENST00000591348 RIMS1Q86UR5 1692 aaKnown RBP32.25■■■□□ 2.75
CROCCP3-206ENST00000591348 MROH2AA6NES4 1674 aa32.24■■■□□ 2.75
CROCCP3-206ENST00000591348 ZMYM3Q14202 1370 aa32.24■■■□□ 2.75
CROCCP3-206ENST00000591348 ARHGAP31Q2M1Z3 1444 aa32.22■■■□□ 2.75
CROCCP3-206ENST00000591348 NPATQ14207 1427 aa32.21■■■□□ 2.75
CROCCP3-206ENST00000591348 E9PCH4 1651 aa32.19■■■□□ 2.74
CROCCP3-206ENST00000591348 DHX57Q6P158 1386 aaKnown RBP32.19■■■□□ 2.74
CROCCP3-206ENST00000591348 KDM4FA0A1W2PPD8 638 aa32.18■■■□□ 2.74
CROCCP3-206ENST00000591348 RPRD2Q5VT52 1461 aaKnown RBP32.18■■■□□ 2.74
CROCCP3-206ENST00000591348 FOXD1Q16676 465 aa32.16■■■□□ 2.74
CROCCP3-206ENST00000591348 C3P01024 1663 aa32.15■■■□□ 2.74
CROCCP3-206ENST00000591348 CEBPAP49715 358 aaPredicted RBP32.15■■■□□ 2.74
CROCCP3-206ENST00000591348 PLPPR3Q6T4P5 718 aa32.15■■■□□ 2.74
CROCCP3-206ENST00000591348 PTPRMP28827 1452 aa32.13■■■□□ 2.73
CROCCP3-206ENST00000591348 CFAP65Q6ZU64 1925 aaKnown RBP32.12■■■□□ 2.73
CROCCP3-206ENST00000591348 FBXO31Q5XUX0 539 aaPredicted RBP32.1■■■□□ 2.73
CROCCP3-206ENST00000591348 ERVK-7P63135 1459 aa32.08■■■□□ 2.73
CROCCP3-206ENST00000591348 PREX1Q8TCU6 1659 aa32.07■■■□□ 2.72
CROCCP3-206ENST00000591348 NOS1P29475 1434 aa32.04■■■□□ 2.72
CROCCP3-206ENST00000591348 SPATA31D1Q6ZQQ2 1576 aa32.04■■■□□ 2.72
CROCCP3-206ENST00000591348 SPHKAPQ2M3C7 1700 aa32.04■■■□□ 2.72
CROCCP3-206ENST00000591348 PTPRTO14522 1441 aa32.03■■■□□ 2.72
CROCCP3-206ENST00000591348 CCER1Q8TC90 406 aaPredicted RBP32.02■■■□□ 2.72
CROCCP3-206ENST00000591348 ANKRD30BQ9BXX2 1392 aa32■■■□□ 2.71
CROCCP3-206ENST00000591348 PLA2R1Q13018 1463 aa32■■■□□ 2.71
CROCCP3-206ENST00000591348 TNRQ92752 1358 aa32■■■□□ 2.71
CROCCP3-206ENST00000591348 TRPM2O94759 1503 aa31.99■■■□□ 2.71
CROCCP3-206ENST00000591348 SYNMO15061 1565 aa31.97■■■□□ 2.71
CROCCP3-206ENST00000591348 CCDC144AA2RUR9 1427 aa31.94■■■□□ 2.7
CROCCP3-206ENST00000591348 SLC52A1Q9NWF4 448 aa31.93■■■□□ 2.7
CROCCP3-206ENST00000591348 UGGT1Q9NYU2 1555 aa31.91■■■□□ 2.7
CROCCP3-206ENST00000591348 SETD1BQ9UPS6 1966 aaKnown RBP31.9■■■□□ 2.7
CROCCP3-206ENST00000591348 CLSPNQ9HAW4 1339 aa31.9■■■□□ 2.7
CROCCP3-206ENST00000591348 IDI1Q13907 227 aa31.89■■■□□ 2.7
CROCCP3-206ENST00000591348 CLTCL1P53675 1640 aa31.88■■■□□ 2.69
CROCCP3-206ENST00000591348 NLRP1Q9C000 1473 aa31.87■■■□□ 2.69
CROCCP3-206ENST00000591348 PIK3C2BO00750 1634 aa31.87■■■□□ 2.69
CROCCP3-206ENST00000591348 MYO3AQ8NEV4 1616 aa31.85■■■□□ 2.69
CROCCP3-206ENST00000591348 SIN3AQ96ST3 1273 aa31.83■■■□□ 2.69
CROCCP3-206ENST00000591348 CHGAP10645 457 aaKnown RBP31.81■■■□□ 2.68
CROCCP3-206ENST00000591348 STAG3Q9UJ98 1225 aa31.81■■■□□ 2.68
CROCCP3-206ENST00000591348 UHRF1BP1Q6BDS2 1440 aa31.81■■■□□ 2.68
CROCCP3-206ENST00000591348 NEUROD1Q13562 356 aa31.8■■■□□ 2.68
CROCCP3-206ENST00000591348 A2ML1A8K2U0 1454 aa31.77■■■□□ 2.68
CROCCP3-206ENST00000591348 KIF1BO60333 1816 aa31.77■■■□□ 2.68
CROCCP3-206ENST00000591348 CEP170BQ9Y4F5 1589 aaPredicted RBP31.77■■■□□ 2.68
CROCCP3-206ENST00000591348 ADGRB3O60242 1522 aa31.75■■■□□ 2.67
CROCCP3-206ENST00000591348 ZNF142P52746 1687 aaPredicted RBP31.73■■■□□ 2.67
CROCCP3-206ENST00000591348 TMEM131LA2VDJ0 1609 aa31.72■■■□□ 2.67
CROCCP3-206ENST00000591348 SPATA31E1Q6ZUB1 1445 aa31.7■■■□□ 2.67
CROCCP3-206ENST00000591348 KDM5AP29375 1690 aaKnown RBP31.7■■■□□ 2.67
CROCCP3-206ENST00000591348 UBR1Q8IWV7 1749 aa31.7■■■□□ 2.66
CROCCP3-206ENST00000591348 RGL3Q3MIN7 710 aa31.7■■■□□ 2.66
CROCCP3-206ENST00000591348 ZNF326Q5BKZ1 582 aaKnown RBP31.69■■■□□ 2.66
CROCCP3-206ENST00000591348 THEMISQ8N1K5 641 aaPredicted RBP31.67■■■□□ 2.66
CROCCP3-206ENST00000591348 NEURL4Q96JN8 1562 aa31.67■■■□□ 2.66
CROCCP3-206ENST00000591348 MYO5BQ9ULV0 1848 aa31.66■■■□□ 2.66
CROCCP3-206ENST00000591348 TONSLQ96HA7 1378 aa31.63■■■□□ 2.65
CROCCP3-206ENST00000591348 AEBP2Q6ZN18 517 aaPredicted RBP31.63■■■□□ 2.65
CROCCP3-206ENST00000591348 LMTK3Q96Q04 1460 aa31.61■■■□□ 2.65
CROCCP3-206ENST00000591348 TMEM2Q9UHN6 1383 aa31.59■■■□□ 2.65
CROCCP3-206ENST00000591348 RPGRIP1LQ68CZ1 1315 aa31.58■■■□□ 2.65
CROCCP3-206ENST00000591348 RIMS2Q9UQ26 1411 aa31.55■■■□□ 2.64
CROCCP3-206ENST00000591348 L3MBTL2Q969R5 705 aa31.55■■■□□ 2.64
CROCCP3-206ENST00000591348 SLIT1O75093 1534 aa31.55■■■□□ 2.64
CROCCP3-206ENST00000591348 DCAF11Q8TEB1 546 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms