RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 ERBINQ96RT1 1412 aa31.46■■■□□ 2.63
ERCC2-212ENST00000591309 EIF2AK4Q9P2K8 1649 aaKnown RBP31.46■■■□□ 2.63
ERCC2-212ENST00000591309 CLTCQ00610 1675 aaKnown RBP31.45■■■□□ 2.63
ERCC2-212ENST00000591309 ADGRL2O95490 1459 aa31.45■■■□□ 2.62
ERCC2-212ENST00000591309 MROH2AA6NES4 1674 aa31.44■■■□□ 2.62
ERCC2-212ENST00000591309 C3P01024 1663 aa31.43■■■□□ 2.62
ERCC2-212ENST00000591309 RRBP1Q9P2E9 1410 aaKnown RBP31.42■■■□□ 2.62
ERCC2-212ENST00000591309 FAM135AQ9P2D6 1515 aa31.41■■■□□ 2.62
ERCC2-212ENST00000591309 KDM5DQ9BY66 1539 aa31.4■■■□□ 2.62
ERCC2-212ENST00000591309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.38■■■□□ 2.612e-8■■□□□ 11.9
ERCC2-212ENST00000591309 RNF17Q9BXT8 1623 aaKnown RBP31.38■■■□□ 2.61
ERCC2-212ENST00000591309 PTPRKQ15262 1439 aa31.37■■■□□ 2.61
ERCC2-212ENST00000591309 SETD1BQ9UPS6 1966 aaKnown RBP31.37■■■□□ 2.61
ERCC2-212ENST00000591309 KANK1Q14678 1352 aa31.36■■■□□ 2.61
ERCC2-212ENST00000591309 ROCK1Q13464 1354 aa31.35■■■□□ 2.61
ERCC2-212ENST00000591309 NPATQ14207 1427 aa31.34■■■□□ 2.61
ERCC2-212ENST00000591309 UHRF1BP1Q6BDS2 1440 aa31.34■■■□□ 2.61
ERCC2-212ENST00000591309 ANKRD50Q9ULJ7 1429 aa31.33■■■□□ 2.61
ERCC2-212ENST00000591309 LMTK3Q96Q04 1460 aa31.33■■■□□ 2.61
ERCC2-212ENST00000591309 PREX1Q8TCU6 1659 aa31.32■■■□□ 2.6
ERCC2-212ENST00000591309 HSPA2P54652 639 aa31.28■■■□□ 2.6
ERCC2-212ENST00000591309 ZC3H13Q5T200 1668 aaKnown RBP31.27■■■□□ 2.6
ERCC2-212ENST00000591309 ABCC3O15438 1527 aa31.27■■■□□ 2.6
ERCC2-212ENST00000591309 MROH1Q8NDA8 1641 aa31.25■■■□□ 2.59
ERCC2-212ENST00000591309 PRDM15P57071 1507 aaPredicted RBP31.24■■■□□ 2.59
ERCC2-212ENST00000591309 PZPP20742 1482 aa31.24■■■□□ 2.59
ERCC2-212ENST00000591309 FBXO31Q5XUX0 539 aaPredicted RBP31.22■■■□□ 2.59
ERCC2-212ENST00000591309 DEPDC5O75140 1603 aa31.2■■■□□ 2.59
ERCC2-212ENST00000591309 TNRQ92752 1358 aa31.19■■■□□ 2.58
ERCC2-212ENST00000591309 CEP152O94986 1710 aa31.19■■■□□ 2.58
ERCC2-212ENST00000591309 CAMSAP1Q5T5Y3 1602 aa31.15■■■□□ 2.58
ERCC2-212ENST00000591309 MYO3AQ8NEV4 1616 aa31.1■■■□□ 2.57
ERCC2-212ENST00000591309 ARHGAP31Q2M1Z3 1444 aa31.1■■■□□ 2.57
ERCC2-212ENST00000591309 LMTK2Q8IWU2 1503 aa31.09■■■□□ 2.57
ERCC2-212ENST00000591309 VWDEQ8N2E2 1590 aa31.08■■■□□ 2.57
ERCC2-212ENST00000591309 ERVK-7P63135 1459 aa31.07■■■□□ 2.56
ERCC2-212ENST00000591309 NUP155O75694 1391 aa31.06■■■□□ 2.56
ERCC2-212ENST00000591309 CEP170BQ9Y4F5 1589 aaPredicted RBP31.06■■■□□ 2.56
ERCC2-212ENST00000591309 A2ML1A8K2U0 1454 aa31.06■■■□□ 2.56
ERCC2-212ENST00000591309 CFAP65Q6ZU64 1925 aaKnown RBP31.06■■■□□ 2.56
ERCC2-212ENST00000591309 UNC13BO14795 1591 aa31.05■■■□□ 2.56
ERCC2-212ENST00000591309 NLRP1Q9C000 1473 aa31.04■■■□□ 2.56
ERCC2-212ENST00000591309 DMRT2Q9Y5R5 561 aa31.04■■■□□ 2.56
ERCC2-212ENST00000591309 NAIPQ13075 1403 aa31.04■■■□□ 2.56
ERCC2-212ENST00000591309 SPATA31D1Q6ZQQ2 1576 aa31.04■■■□□ 2.56
ERCC2-212ENST00000591309 ZNF142P52746 1687 aaPredicted RBP31.02■■■□□ 2.56
ERCC2-212ENST00000591309 HFM1A2PYH4 1435 aa31.01■■■□□ 2.55
ERCC2-212ENST00000591309 EFCAB6Q5THR3 1501 aa30.99■■■□□ 2.55
ERCC2-212ENST00000591309 THEMISQ8N1K5 641 aaPredicted RBP30.99■■■□□ 2.55
ERCC2-212ENST00000591309 GCC2Q8IWJ2 1684 aa30.98■■■□□ 2.55
ERCC2-212ENST00000591309 TRIM52Q96A61 297 aa30.97■■■□□ 2.55
ERCC2-212ENST00000591309 TET3O43151 1660 aa30.96■■■□□ 2.55
ERCC2-212ENST00000591309 STAG3Q9UJ98 1225 aa30.95■■■□□ 2.55
ERCC2-212ENST00000591309 RPRD2Q5VT52 1461 aaKnown RBP30.94■■■□□ 2.54
ERCC2-212ENST00000591309 UGGT1Q9NYU2 1555 aa30.93■■■□□ 2.54
ERCC2-212ENST00000591309 PKD2Q13563 968 aa30.93■■■□□ 2.54
ERCC2-212ENST00000591309 IQGAP3Q86VI3 1631 aa30.93■■■□□ 2.54
ERCC2-212ENST00000591309 PLA2R1Q13018 1463 aa30.91■■■□□ 2.54
ERCC2-212ENST00000591309 NCKAP5LQ9HCH0 1330 aa30.9■■■□□ 2.54
ERCC2-212ENST00000591309 STRCQ7RTU9 1775 aa30.88■■■□□ 2.53
ERCC2-212ENST00000591309 SLC52A1Q9NWF4 448 aa30.88■■■□□ 2.53
ERCC2-212ENST00000591309 ANKLE2Q86XL3 938 aa30.87■■■□□ 2.53
ERCC2-212ENST00000591309 NOS1P29475 1434 aa30.87■■■□□ 2.53
ERCC2-212ENST00000591309 PTPRTO14522 1441 aa30.84■■■□□ 2.53
ERCC2-212ENST00000591309 IDI1Q13907 227 aa30.84■■■□□ 2.53
ERCC2-212ENST00000591309 ACIN1Q9UKV3 1341 aaKnown RBP30.82■■■□□ 2.52
ERCC2-212ENST00000591309 E9PCH4 1651 aa30.81■■■□□ 2.52
ERCC2-212ENST00000591309 SYNMO15061 1565 aa30.79■■■□□ 2.52
ERCC2-212ENST00000591309 SLC4A1APQ9BWU0 796 aaKnown RBP30.79■■■□□ 2.52
ERCC2-212ENST00000591309 SETD5Q9C0A6 1442 aa30.79■■■□□ 2.52
ERCC2-212ENST00000591309 PIK3C2BO00750 1634 aa30.77■■■□□ 2.52
ERCC2-212ENST00000591309 UBR1Q8IWV7 1749 aa30.76■■■□□ 2.52
ERCC2-212ENST00000591309 CHGAP10645 457 aaKnown RBP30.76■■■□□ 2.51
ERCC2-212ENST00000591309 EID1Q9Y6B2 187 aa30.76■■■□□ 2.51
ERCC2-212ENST00000591309 TXNDC2Q86VQ3 553 aa30.72■■■□□ 2.51
ERCC2-212ENST00000591309 POLR1AO95602 1720 aaPredicted RBP30.7■■■□□ 2.51
ERCC2-212ENST00000591309 ADGRB3O60242 1522 aa30.68■■■□□ 2.5
ERCC2-212ENST00000591309 TMEM2Q9UHN6 1383 aa30.68■■■□□ 2.5
ERCC2-212ENST00000591309 KDM5AP29375 1690 aaKnown RBP30.68■■■□□ 2.5
ERCC2-212ENST00000591309 NPHP4O75161 1426 aaPredicted RBP30.67■■■□□ 2.5
ERCC2-212ENST00000591309 HDGFP51858 240 aaKnown RBP30.67■■■□□ 2.5
ERCC2-212ENST00000591309 RAB3GAP2Q9H2M9 1393 aa30.66■■■□□ 2.5
ERCC2-212ENST00000591309 SCAF11Q99590 1463 aaKnown RBP30.65■■■□□ 2.5
ERCC2-212ENST00000591309 SLIT1O75093 1534 aa30.65■■■□□ 2.5
ERCC2-212ENST00000591309 ARHGAP23Q9P227 1491 aa30.64■■■□□ 2.5
ERCC2-212ENST00000591309 MPHOSPH9Q99550 1183 aa30.64■■■□□ 2.5
ERCC2-212ENST00000591309 LTKP29376 864 aa30.63■■■□□ 2.49
ERCC2-212ENST00000591309 SPHKAPQ2M3C7 1700 aa30.63■■■□□ 2.49
ERCC2-212ENST00000591309 NEURL4Q96JN8 1562 aa30.62■■■□□ 2.49
ERCC2-212ENST00000591309 MED14O60244 1454 aa30.62■■■□□ 2.49
ERCC2-212ENST00000591309 PPP1R15AO75807 674 aaPredicted RBP30.6■■■□□ 2.49
ERCC2-212ENST00000591309 BCANQ96GW7 911 aa30.59■■■□□ 2.49
ERCC2-212ENST00000591309 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
ERCC2-212ENST00000591309 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.57■■■□□ 2.48
ERCC2-212ENST00000591309 ZNF335Q9H4Z2 1342 aaPredicted RBP30.56■■■□□ 2.48
ERCC2-212ENST00000591309 TMEM131LA2VDJ0 1609 aa30.56■■■□□ 2.48
ERCC2-212ENST00000591309 ZNF326Q5BKZ1 582 aaKnown RBP30.56■■■□□ 2.48
ERCC2-212ENST00000591309 IQGAP1P46940 1657 aa30.55■■■□□ 2.48
ERCC2-212ENST00000591309 HRCP23327 699 aa30.55■■■□□ 2.48
ERCC2-212ENST00000591309 FOXD1Q16676 465 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms