RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 WASHC2CQ9Y4E1 1318 aa34.44■■■■□ 3.1
MBD3-208ENST00000590830 SETD1BQ9UPS6 1966 aaKnown RBP34.43■■■■□ 3.1
MBD3-208ENST00000590830 PTPRKQ15262 1439 aa34.43■■■■□ 3.1
MBD3-208ENST00000590830 PREX1Q8TCU6 1659 aa34.43■■■■□ 3.1
MBD3-208ENST00000590830 NPATQ14207 1427 aa34.42■■■■□ 3.1
MBD3-208ENST00000590830 NCOA1Q15788 1441 aa34.42■■■■□ 3.1
MBD3-208ENST00000590830 UHRF1BP1Q6BDS2 1440 aa34.42■■■■□ 3.1
MBD3-208ENST00000590830 ANKRD30AQ9BXX3 1397 aa34.41■■■■□ 3.1
MBD3-208ENST00000590830 RNF17Q9BXT8 1623 aaKnown RBP34.38■■■■□ 3.09
MBD3-208ENST00000590830 KDM5DQ9BY66 1539 aa34.38■■■■□ 3.09
MBD3-208ENST00000590830 EIF2AK4Q9P2K8 1649 aaKnown RBP34.37■■■■□ 3.09
MBD3-208ENST00000590830 FBXO31Q5XUX0 539 aaPredicted RBP34.36■■■■□ 3.09
MBD3-208ENST00000590830 ERBINQ96RT1 1412 aa34.36■■■■□ 3.09
MBD3-208ENST00000590830 ADGRL2O95490 1459 aa34.35■■■■□ 3.09
MBD3-208ENST00000590830 FAM135AQ9P2D6 1515 aa34.35■■■■□ 3.09
MBD3-208ENST00000590830 MROH1Q8NDA8 1641 aa34.34■■■■□ 3.09
MBD3-208ENST00000590830 ABCC3O15438 1527 aa34.3■■■■□ 3.08
MBD3-208ENST00000590830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.28■■■■□ 3.08
MBD3-208ENST00000590830 PZPP20742 1482 aa34.27■■■■□ 3.08
MBD3-208ENST00000590830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.25■■■■□ 3.072e-7■□□□□ 9.9
MBD3-208ENST00000590830 ITGAEP38570 1179 aa34.24■■■■□ 3.07
MBD3-208ENST00000590830 TNRQ92752 1358 aa34.21■■■■□ 3.07
MBD3-208ENST00000590830 RRBP1Q9P2E9 1410 aaKnown RBP34.21■■■■□ 3.07
MBD3-208ENST00000590830 PRDM15P57071 1507 aaPredicted RBP34.2■■■■□ 3.07
MBD3-208ENST00000590830 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
MBD3-208ENST00000590830 ANKRD50Q9ULJ7 1429 aa34.18■■■■□ 3.06
MBD3-208ENST00000590830 DEPDC5O75140 1603 aa34.17■■■■□ 3.06
MBD3-208ENST00000590830 ZC3H13Q5T200 1668 aaKnown RBP34.17■■■■□ 3.06
MBD3-208ENST00000590830 MYO3AQ8NEV4 1616 aa34.17■■■■□ 3.06
MBD3-208ENST00000590830 STRCQ7RTU9 1775 aa34.16■■■■□ 3.06
MBD3-208ENST00000590830 CEP152O94986 1710 aa34.14■■■■□ 3.06
MBD3-208ENST00000590830 CEP170BQ9Y4F5 1589 aaPredicted RBP34.13■■■■□ 3.05
MBD3-208ENST00000590830 KANK1Q14678 1352 aa34.11■■■■□ 3.05
MBD3-208ENST00000590830 A2ML1A8K2U0 1454 aa34.11■■■■□ 3.05
MBD3-208ENST00000590830 CAMSAP1Q5T5Y3 1602 aa34.1■■■■□ 3.05
MBD3-208ENST00000590830 VWDEQ8N2E2 1590 aa34.1■■■■□ 3.05
MBD3-208ENST00000590830 ZNF142P52746 1687 aaPredicted RBP34.09■■■■□ 3.05
MBD3-208ENST00000590830 ARHGAP31Q2M1Z3 1444 aa34.09■■■■□ 3.05
MBD3-208ENST00000590830 ERVK-7P63135 1459 aa34.08■■■■□ 3.05
MBD3-208ENST00000590830 DMRT2Q9Y5R5 561 aa34.07■■■■□ 3.04
MBD3-208ENST00000590830 SPATA31D1Q6ZQQ2 1576 aa34.06■■■■□ 3.04
MBD3-208ENST00000590830 NCKAP5LQ9HCH0 1330 aa34.06■■■■□ 3.04
MBD3-208ENST00000590830 LMTK2Q8IWU2 1503 aa34.05■■■■□ 3.04
MBD3-208ENST00000590830 NLRP1Q9C000 1473 aa34.02■■■■□ 3.04
MBD3-208ENST00000590830 PTPRTO14522 1441 aa34.01■■■■□ 3.03
MBD3-208ENST00000590830 PLA2R1Q13018 1463 aa33.99■■■■□ 3.03
MBD3-208ENST00000590830 CFAP65Q6ZU64 1925 aaKnown RBP33.97■■■■□ 3.03
MBD3-208ENST00000590830 PKD2Q13563 968 aa33.96■■■■□ 3.03
MBD3-208ENST00000590830 THEMISQ8N1K5 641 aaPredicted RBP33.95■■■■□ 3.03
MBD3-208ENST00000590830 UNC13BO14795 1591 aa33.92■■■■□ 3.02
MBD3-208ENST00000590830 UGGT1Q9NYU2 1555 aa33.92■■■■□ 3.02
MBD3-208ENST00000590830 EFCAB6Q5THR3 1501 aa33.91■■■■□ 3.02
MBD3-208ENST00000590830 NAIPQ13075 1403 aa33.87■■■■□ 3.01
MBD3-208ENST00000590830 ILDR1Q86SU0 546 aaPredicted RBP33.87■■■■□ 3.01
MBD3-208ENST00000590830 NOS1P29475 1434 aa33.87■■■■□ 3.01
MBD3-208ENST00000590830 NUP155O75694 1391 aa33.86■■■■□ 3.01
MBD3-208ENST00000590830 IDI1Q13907 227 aa33.85■■■■□ 3.01
MBD3-208ENST00000590830 ANKLE2Q86XL3 938 aa33.84■■■■□ 3.01
MBD3-208ENST00000590830 SYNMO15061 1565 aa33.81■■■■□ 3
MBD3-208ENST00000590830 CERKQ8TCT0 537 aa33.81■■■■□ 3
MBD3-208ENST00000590830 TET3O43151 1660 aa33.8■■■■□ 3
MBD3-208ENST00000590830 RPRD2Q5VT52 1461 aaKnown RBP33.8■■■■□ 3
MBD3-208ENST00000590830 NEURL4Q96JN8 1562 aa33.78■■■■□ 3
MBD3-208ENST00000590830 IQGAP3Q86VI3 1631 aa33.78■■■■□ 3
MBD3-208ENST00000590830 UBR1Q8IWV7 1749 aa33.77■■■■□ 3
MBD3-208ENST00000590830 HFM1A2PYH4 1435 aa33.77■■■■□ 3
MBD3-208ENST00000590830 SLC52A1Q9NWF4 448 aa33.74■■■□□ 2.99
MBD3-208ENST00000590830 PIK3C2BO00750 1634 aa33.74■■■□□ 2.99
MBD3-208ENST00000590830 GCC2Q8IWJ2 1684 aa33.73■■■□□ 2.99
MBD3-208ENST00000590830 ZNF335Q9H4Z2 1342 aaPredicted RBP33.73■■■□□ 2.99
MBD3-208ENST00000590830 LTBP4Q8N2S1 1624 aa33.72■■■□□ 2.99
MBD3-208ENST00000590830 LTKP29376 864 aa33.72■■■□□ 2.99
MBD3-208ENST00000590830 FBXO41Q8TF61 875 aa33.71■■■□□ 2.99
MBD3-208ENST00000590830 E9PCH4 1651 aa33.71■■■□□ 2.99
MBD3-208ENST00000590830 POLR1AO95602 1720 aaPredicted RBP33.7■■■□□ 2.99
MBD3-208ENST00000590830 MED14O60244 1454 aa33.7■■■□□ 2.99
MBD3-208ENST00000590830 ARHGAP23Q9P227 1491 aa33.7■■■□□ 2.99
MBD3-208ENST00000590830 STAG3Q9UJ98 1225 aa33.7■■■□□ 2.99
MBD3-208ENST00000590830 NPHP4O75161 1426 aaPredicted RBP33.69■■■□□ 2.98
MBD3-208ENST00000590830 TXNDC2Q86VQ3 553 aa33.67■■■□□ 2.98
MBD3-208ENST00000590830 SLIT1O75093 1534 aa33.67■■■□□ 2.98
MBD3-208ENST00000590830 TMEM2Q9UHN6 1383 aa33.66■■■□□ 2.98
MBD3-208ENST00000590830 SCAF11Q99590 1463 aaKnown RBP33.62■■■□□ 2.97
MBD3-208ENST00000590830 TRIM52Q96A61 297 aa33.61■■■□□ 2.97
MBD3-208ENST00000590830 ADGRB3O60242 1522 aa33.59■■■□□ 2.97
MBD3-208ENST00000590830 KDM5AP29375 1690 aaKnown RBP33.59■■■□□ 2.97
MBD3-208ENST00000590830 EID1Q9Y6B2 187 aa33.59■■■□□ 2.97
MBD3-208ENST00000590830 IQGAP1P46940 1657 aa33.55■■■□□ 2.96
MBD3-208ENST00000590830 CHGAP10645 457 aaKnown RBP33.52■■■□□ 2.96
MBD3-208ENST00000590830 TMEM131LA2VDJ0 1609 aa33.51■■■□□ 2.96
MBD3-208ENST00000590830 SLC4A1APQ9BWU0 796 aaKnown RBP33.49■■■□□ 2.95
MBD3-208ENST00000590830 ZFYVE9O95405 1425 aa33.47■■■□□ 2.95
MBD3-208ENST00000590830 RIMS2Q9UQ26 1411 aa33.45■■■□□ 2.94
MBD3-208ENST00000590830 MYO5BQ9ULV0 1848 aa33.44■■■□□ 2.94
MBD3-208ENST00000590830 IQSEC2Q5JU85 1478 aa33.44■■■□□ 2.94
MBD3-208ENST00000590830 SETD5Q9C0A6 1442 aa33.43■■■□□ 2.94
MBD3-208ENST00000590830 SPHKAPQ2M3C7 1700 aa33.42■■■□□ 2.94
MBD3-208ENST00000590830 SLC26A8Q96RN1 970 aa33.4■■■□□ 2.94
MBD3-208ENST00000590830 CPS1P31327 1500 aa33.39■■■□□ 2.94
MBD3-208ENST00000590830 FOXD1Q16676 465 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms