RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 A2MP01023 1474 aa14.75□□□□□ -0.05
AP3D1-208ENST00000590683 TNRQ92752 1358 aa14.74□□□□□ -0.05
AP3D1-208ENST00000590683 SYCP2Q9BX26 1530 aa14.74□□□□□ -0.05
AP3D1-208ENST00000590683 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
AP3D1-208ENST00000590683 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
AP3D1-208ENST00000590683 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
AP3D1-208ENST00000590683 ZC3H13Q5T200 1668 aaKnown RBP14.73□□□□□ -0.05
AP3D1-208ENST00000590683 ROBO1Q9Y6N7 1651 aa14.73□□□□□ -0.05
AP3D1-208ENST00000590683 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
AP3D1-208ENST00000590683 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
AP3D1-208ENST00000590683 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
AP3D1-208ENST00000590683 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
AP3D1-208ENST00000590683 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
AP3D1-208ENST00000590683 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
AP3D1-208ENST00000590683 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.068e-6■□□□□ 11.3
AP3D1-208ENST00000590683 ZNF777Q9ULD5 760 aaPredicted RBP14.68□□□□□ -0.06
AP3D1-208ENST00000590683 PZPP20742 1482 aa14.67□□□□□ -0.06
AP3D1-208ENST00000590683 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
AP3D1-208ENST00000590683 PHLPP1O60346 1717 aa14.66□□□□□ -0.06
AP3D1-208ENST00000590683 NLRP1Q9C000 1473 aa14.64□□□□□ -0.07
AP3D1-208ENST00000590683 MIA2Q96PC5 1412 aa14.63□□□□□ -0.07
AP3D1-208ENST00000590683 LRP6O75581 1613 aa14.63□□□□□ -0.07
AP3D1-208ENST00000590683 KDM5DQ9BY66 1539 aa14.61□□□□□ -0.07
AP3D1-208ENST00000590683 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
AP3D1-208ENST00000590683 JCADQ9P266 1359 aa14.59□□□□□ -0.07
AP3D1-208ENST00000590683 ZNF772Q68DY9 489 aaPredicted RBP14.58□□□□□ -0.08
AP3D1-208ENST00000590683 UBR1Q8IWV7 1749 aa14.58□□□□□ -0.08
AP3D1-208ENST00000590683 MAP3K1Q13233 1512 aa14.56□□□□□ -0.08
AP3D1-208ENST00000590683 GPATCH8Q9UKJ3 1502 aaKnown RBP14.56□□□□□ -0.08
AP3D1-208ENST00000590683 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
AP3D1-208ENST00000590683 COL16A1Q07092 1604 aaPredicted RBP14.56□□□□□ -0.08
AP3D1-208ENST00000590683 RXRBP28702 533 aa14.56□□□□□ -0.08
AP3D1-208ENST00000590683 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
AP3D1-208ENST00000590683 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
AP3D1-208ENST00000590683 MEX3CQ5U5Q3 659 aaKnown RBP14.55□□□□□ -0.08
AP3D1-208ENST00000590683 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
AP3D1-208ENST00000590683 KIAA1107Q9UPP5 1409 aa14.55□□□□□ -0.08
AP3D1-208ENST00000590683 SCAF11Q99590 1463 aaKnown RBP14.55□□□□□ -0.08
AP3D1-208ENST00000590683 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
AP3D1-208ENST00000590683 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
AP3D1-208ENST00000590683 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
AP3D1-208ENST00000590683 KIF3BO15066 747 aa14.53□□□□□ -0.08
AP3D1-208ENST00000590683 PLEKHH2Q8IVE3 1493 aa14.52□□□□□ -0.08
AP3D1-208ENST00000590683 DHX29Q7Z478 1369 aaKnown RBP14.52□□□□□ -0.08
AP3D1-208ENST00000590683 LTKP29376 864 aa14.52□□□□□ -0.09
AP3D1-208ENST00000590683 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
AP3D1-208ENST00000590683 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
AP3D1-208ENST00000590683 SPATA31A6Q5VVP1 1343 aa14.49□□□□□ -0.09
AP3D1-208ENST00000590683 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
AP3D1-208ENST00000590683 NCOA2Q15596 1464 aa14.49□□□□□ -0.09
AP3D1-208ENST00000590683 RGS12O14924 1447 aa14.49□□□□□ -0.09
AP3D1-208ENST00000590683 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
AP3D1-208ENST00000590683 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
AP3D1-208ENST00000590683 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
AP3D1-208ENST00000590683 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
AP3D1-208ENST00000590683 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
AP3D1-208ENST00000590683 EEA1Q15075 1411 aa14.47□□□□□ -0.09
AP3D1-208ENST00000590683 SLIT1O75093 1534 aa14.46□□□□□ -0.09
AP3D1-208ENST00000590683 ERVK-7P63135 1459 aa14.46□□□□□ -0.09
AP3D1-208ENST00000590683 PROSER2Q86WR7 435 aaPredicted RBP14.46□□□□□ -0.09
AP3D1-208ENST00000590683 SLAIN2Q9P270 581 aa14.46□□□□□ -0.09
AP3D1-208ENST00000590683 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
AP3D1-208ENST00000590683 RTEL1-TNFRSF6BF6WH68 1400 aa14.45□□□□□ -0.1
AP3D1-208ENST00000590683 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
AP3D1-208ENST00000590683 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
AP3D1-208ENST00000590683 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
AP3D1-208ENST00000590683 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
AP3D1-208ENST00000590683 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
AP3D1-208ENST00000590683 NUTM2DQ5VT03 806 aaPredicted RBP14.44□□□□□ -0.1
AP3D1-208ENST00000590683 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
AP3D1-208ENST00000590683 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
AP3D1-208ENST00000590683 AFF2P51816 1311 aa14.42□□□□□ -0.1
AP3D1-208ENST00000590683 ABCC3O15438 1527 aa14.42□□□□□ -0.1
AP3D1-208ENST00000590683 CEP152O94986 1710 aa14.42□□□□□ -0.1
AP3D1-208ENST00000590683 KCNA6P17658 529 aa14.42□□□□□ -0.1
AP3D1-208ENST00000590683 MSH6P52701 1360 aa14.42□□□□□ -0.1
AP3D1-208ENST00000590683 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
AP3D1-208ENST00000590683 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
AP3D1-208ENST00000590683 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
AP3D1-208ENST00000590683 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
AP3D1-208ENST00000590683 EID1Q9Y6B2 187 aa14.39□□□□□ -0.11
AP3D1-208ENST00000590683 AHDC1Q5TGY3 1603 aaPredicted RBP14.39□□□□□ -0.11
AP3D1-208ENST00000590683 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
AP3D1-208ENST00000590683 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
AP3D1-208ENST00000590683 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
AP3D1-208ENST00000590683 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
AP3D1-208ENST00000590683 TET3O43151 1660 aa14.38□□□□□ -0.11
AP3D1-208ENST00000590683 EP400Q96L91 3159 aa14.37□□□□□ -0.11
AP3D1-208ENST00000590683 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
AP3D1-208ENST00000590683 RBM6P78332 1123 aaKnown RBP14.36□□□□□ -0.11
AP3D1-208ENST00000590683 FOXD1Q16676 465 aa14.36□□□□□ -0.11
AP3D1-208ENST00000590683 QTRT2Q9H974 415 aaKnown RBP14.36□□□□□ -0.11
AP3D1-208ENST00000590683 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
AP3D1-208ENST00000590683 MROH1Q8NDA8 1641 aa14.34□□□□□ -0.11
AP3D1-208ENST00000590683 CHD2O14647 1828 aaKnown RBP14.34□□□□□ -0.11
AP3D1-208ENST00000590683 LRP5O75197 1615 aa14.33□□□□□ -0.11
AP3D1-208ENST00000590683 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
AP3D1-208ENST00000590683 CCDC141Q6ZP82 1450 aa14.32□□□□□ -0.12
AP3D1-208ENST00000590683 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
AP3D1-208ENST00000590683 C8orf37Q96NL8 207 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms