RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 KDM5DQ9BY66 1539 aa26.39■■□□□ 1.82
CTDP1-205ENST00000590599 KIDINS220Q9ULH0 1771 aa26.39■■□□□ 1.82
CTDP1-205ENST00000590599 ABCA6Q8N139 1617 aa26.39■■□□□ 1.81
CTDP1-205ENST00000590599 UNC13BO14795 1591 aa26.38■■□□□ 1.81
CTDP1-205ENST00000590599 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
CTDP1-205ENST00000590599 MLECQ14165 292 aa26.37■■□□□ 1.81
CTDP1-205ENST00000590599 DIP2CQ9Y2E4 1556 aa26.36■■□□□ 1.81
CTDP1-205ENST00000590599 NUP155O75694 1391 aa26.36■■□□□ 1.81
CTDP1-205ENST00000590599 MLH3Q9UHC1 1453 aa26.36■■□□□ 1.81
CTDP1-205ENST00000590599 ATP10AO60312 1499 aa26.35■■□□□ 1.81
CTDP1-205ENST00000590599 RIMS1Q86UR5 1692 aaKnown RBP26.34■■□□□ 1.81
CTDP1-205ENST00000590599 SIN3AQ96ST3 1273 aa26.33■■□□□ 1.8
CTDP1-205ENST00000590599 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
CTDP1-205ENST00000590599 PTPRMP28827 1452 aa26.3■■□□□ 1.8
CTDP1-205ENST00000590599 EIF2AK4Q9P2K8 1649 aaKnown RBP26.3■■□□□ 1.8
CTDP1-205ENST00000590599 FAM135AQ9P2D6 1515 aa26.29■■□□□ 1.8
CTDP1-205ENST00000590599 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
CTDP1-205ENST00000590599 DHX29Q7Z478 1369 aaKnown RBP26.28■■□□□ 1.8
CTDP1-205ENST00000590599 IQGAP3Q86VI3 1631 aa26.27■■□□□ 1.8
CTDP1-205ENST00000590599 FER1L4A9Z1Z3 1794 aa26.27■■□□□ 1.8
CTDP1-205ENST00000590599 FOXD1Q16676 465 aa26.26■■□□□ 1.79
CTDP1-205ENST00000590599 DEPDC5O75140 1603 aa26.25■■□□□ 1.79
CTDP1-205ENST00000590599 A2MP01023 1474 aa26.25■■□□□ 1.79
CTDP1-205ENST00000590599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.79
CTDP1-205ENST00000590599 PKD2Q13563 968 aa26.23■■□□□ 1.79
CTDP1-205ENST00000590599 TIMELESSQ9UNS1 1208 aa26.23■■□□□ 1.79
CTDP1-205ENST00000590599 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
CTDP1-205ENST00000590599 TONSLQ96HA7 1378 aa26.19■■□□□ 1.78
CTDP1-205ENST00000590599 REREQ9P2R6 1566 aa26.18■■□□□ 1.78
CTDP1-205ENST00000590599 KIF3BO15066 747 aa26.18■■□□□ 1.78
CTDP1-205ENST00000590599 PRDM15P57071 1507 aaPredicted RBP26.16■■□□□ 1.78
CTDP1-205ENST00000590599 RNF17Q9BXT8 1623 aaKnown RBP26.15■■□□□ 1.78
CTDP1-205ENST00000590599 KANK1Q14678 1352 aa26.14■■□□□ 1.78
CTDP1-205ENST00000590599 MROH1Q8NDA8 1641 aa26.13■■□□□ 1.77
CTDP1-205ENST00000590599 RPRD2Q5VT52 1461 aaKnown RBP26.13■■□□□ 1.77
CTDP1-205ENST00000590599 CEBPAP49715 358 aaPredicted RBP26.12■■□□□ 1.77
CTDP1-205ENST00000590599 VWDEQ8N2E2 1590 aa26.11■■□□□ 1.77
CTDP1-205ENST00000590599 AGLP35573 1532 aa26.09■■□□□ 1.77
CTDP1-205ENST00000590599 TET3O43151 1660 aa26.09■■□□□ 1.77
CTDP1-205ENST00000590599 E9PCH4 1651 aa26.04■■□□□ 1.76
CTDP1-205ENST00000590599 C3P01024 1663 aa26.03■■□□□ 1.76
CTDP1-205ENST00000590599 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
CTDP1-205ENST00000590599 CEP152O94986 1710 aa26.01■■□□□ 1.75
CTDP1-205ENST00000590599 LMTK3Q96Q04 1460 aa26■■□□□ 1.75
CTDP1-205ENST00000590599 LMTK2Q8IWU2 1503 aa26■■□□□ 1.75
CTDP1-205ENST00000590599 GGT6Q6P531 493 aa25.99■■□□□ 1.75
CTDP1-205ENST00000590599 CCDC144AA2RUR9 1427 aa25.98■■□□□ 1.75
CTDP1-205ENST00000590599 CLTCQ00610 1675 aaKnown RBP25.98■■□□□ 1.75
CTDP1-205ENST00000590599 EFCAB6Q5THR3 1501 aa25.98■■□□□ 1.75
CTDP1-205ENST00000590599 PLA2R1Q13018 1463 aa25.97■■□□□ 1.75
CTDP1-205ENST00000590599 HSPA2P54652 639 aa25.96■■□□□ 1.75
CTDP1-205ENST00000590599 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
CTDP1-205ENST00000590599 L3MBTL2Q969R5 705 aa25.95■■□□□ 1.75
CTDP1-205ENST00000590599 ABCC3O15438 1527 aa25.94■■□□□ 1.74
CTDP1-205ENST00000590599 ZC3H13Q5T200 1668 aaKnown RBP25.93■■□□□ 1.74
CTDP1-205ENST00000590599 TRPM2O94759 1503 aa25.93■■□□□ 1.74
CTDP1-205ENST00000590599 ESF1Q9H501 851 aaKnown RBP25.92■■□□□ 1.74
CTDP1-205ENST00000590599 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
CTDP1-205ENST00000590599 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
CTDP1-205ENST00000590599 CAMSAP1Q5T5Y3 1602 aa25.9■■□□□ 1.74
CTDP1-205ENST00000590599 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
CTDP1-205ENST00000590599 PTPRTO14522 1441 aa25.89■■□□□ 1.74
CTDP1-205ENST00000590599 MROH2AA6NES4 1674 aa25.87■■□□□ 1.73
CTDP1-205ENST00000590599 SETD1BQ9UPS6 1966 aaKnown RBP25.85■■□□□ 1.73
CTDP1-205ENST00000590599 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
CTDP1-205ENST00000590599 NPATQ14207 1427 aa25.83■■□□□ 1.73
CTDP1-205ENST00000590599 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
CTDP1-205ENST00000590599 CLTCL1P53675 1640 aa25.82■■□□□ 1.72
CTDP1-205ENST00000590599 PPP6R1Q9UPN7 881 aa25.78■■□□□ 1.72
CTDP1-205ENST00000590599 ARHGAP31Q2M1Z3 1444 aa25.78■■□□□ 1.72
CTDP1-205ENST00000590599 UHRF1BP1Q6BDS2 1440 aa25.76■■□□□ 1.71
CTDP1-205ENST00000590599 CFAP65Q6ZU64 1925 aaKnown RBP25.75■■□□□ 1.71
CTDP1-205ENST00000590599 SPATA31E1Q6ZUB1 1445 aa25.74■■□□□ 1.71
CTDP1-205ENST00000590599 RGL3Q3MIN7 710 aa25.74■■□□□ 1.71
CTDP1-205ENST00000590599 UGGT1Q9NYU2 1555 aa25.74■■□□□ 1.71
CTDP1-205ENST00000590599 STRCQ7RTU9 1775 aa25.73■■□□□ 1.71
CTDP1-205ENST00000590599 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
CTDP1-205ENST00000590599 KIF1BO60333 1816 aa25.73■■□□□ 1.71
CTDP1-205ENST00000590599 FBXO31Q5XUX0 539 aaPredicted RBP25.72■■□□□ 1.71
CTDP1-205ENST00000590599 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
CTDP1-205ENST00000590599 ZNF326Q5BKZ1 582 aaKnown RBP25.71■■□□□ 1.71
CTDP1-205ENST00000590599 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
CTDP1-205ENST00000590599 NOS1P29475 1434 aa25.7■■□□□ 1.7
CTDP1-205ENST00000590599 MYO3AQ8NEV4 1616 aa25.7■■□□□ 1.7
CTDP1-205ENST00000590599 KDM2AQ9Y2K7 1162 aa25.69■■□□□ 1.7
CTDP1-205ENST00000590599 SYNMO15061 1565 aa25.67■■□□□ 1.7
CTDP1-205ENST00000590599 PIK3C2BO00750 1634 aa25.64■■□□□ 1.7
CTDP1-205ENST00000590599 RALGAPBQ86X10 1494 aa25.64■■□□□ 1.69
CTDP1-205ENST00000590599 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
CTDP1-205ENST00000590599 ADGRB3O60242 1522 aa25.63■■□□□ 1.69
CTDP1-205ENST00000590599 ZNF142P52746 1687 aaPredicted RBP25.61■■□□□ 1.69
CTDP1-205ENST00000590599 ERVK-7P63135 1459 aa25.61■■□□□ 1.69
CTDP1-205ENST00000590599 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
CTDP1-205ENST00000590599 TRPM1Q7Z4N2 1603 aa25.58■■□□□ 1.69
CTDP1-205ENST00000590599 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.69
CTDP1-205ENST00000590599 DIEXFQ68CQ4 756 aaKnown RBP25.57■■□□□ 1.68
CTDP1-205ENST00000590599 STAC3Q96MF2 364 aa25.57■■□□□ 1.68
CTDP1-205ENST00000590599 CHGAP10645 457 aaKnown RBP25.56■■□□□ 1.68
CTDP1-205ENST00000590599 IFT172Q9UG01 1749 aa25.56■■□□□ 1.68
CTDP1-205ENST00000590599 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms