RNA–Protein interactions for RNA: ENST00000590555.5

PRCD-208, Transcript of photoreceptor disc component, human

TSL 3

Gene PRCD, Length 673 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRCD-208	ENST00000590555	CNTLN	Q9NXG0	1405 aa		33.35	■■■□□ 2.93
PRCD-208	ENST00000590555	RNF17	Q9BXT8	1623 aa	Known RBP	33.35	■■■□□ 2.93
PRCD-208	ENST00000590555	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.32	■■■□□ 2.92
PRCD-208	ENST00000590555	PTPRM	P28827	1452 aa		33.31	■■■□□ 2.92
PRCD-208	ENST00000590555	FAM135A	Q9P2D6	1515 aa		33.3	■■■□□ 2.92
PRCD-208	ENST00000590555	WASHC2C	Q9Y4E1	1318 aa		33.27	■■■□□ 2.92
PRCD-208	ENST00000590555	KDM5D	Q9BY66	1539 aa		33.25	■■■□□ 2.91
PRCD-208	ENST00000590555	HFM1	A2PYH4	1435 aa		33.25	■■■□□ 2.91
PRCD-208	ENST00000590555	DEPDC5	O75140	1603 aa		33.24	■■■□□ 2.91
PRCD-208	ENST00000590555	CLTC	Q00610	1675 aa	Known RBP	33.24	■■■□□ 2.91
PRCD-208	ENST00000590555	MROH2A	A6NES4	1674 aa		33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	GCC2	Q8IWJ2	1684 aa		33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	KANK1	Q14678	1352 aa		33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	NAIP	Q13075	1403 aa		33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	MROH1	Q8NDA8	1641 aa		33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	PRDM15	P57071	1507 aa	Predicted RBP	33.23	■■■□□ 2.91
PRCD-208	ENST00000590555	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.21	■■■□□ 2.91
PRCD-208	ENST00000590555	ZC3H13	Q5T200	1668 aa	Known RBP	33.2	■■■□□ 2.91
PRCD-208	ENST00000590555	ZMYM3	Q14202	1370 aa		33.19	■■■□□ 2.9
PRCD-208	ENST00000590555	PLPPR3	Q6T4P5	718 aa		33.16	■■■□□ 2.9
PRCD-208	ENST00000590555	ABCC3	O15438	1527 aa		33.15	■■■□□ 2.9
PRCD-208	ENST00000590555	C3	P01024	1663 aa		33.15	■■■□□ 2.9
PRCD-208	ENST00000590555	UNC13B	O14795	1591 aa		33.13	■■■□□ 2.89
PRCD-208	ENST00000590555	CEBPA	P49715	358 aa	Predicted RBP	33.13	■■■□□ 2.89
PRCD-208	ENST00000590555	CEP152	O94986	1710 aa		33.11	■■■□□ 2.89
PRCD-208	ENST00000590555	VWDE	Q8N2E2	1590 aa		33.1	■■■□□ 2.89
PRCD-208	ENST00000590555	LMTK2	Q8IWU2	1503 aa		33.07	■■■□□ 2.88
PRCD-208	ENST00000590555	CAMSAP1	Q5T5Y3	1602 aa		33.06	■■■□□ 2.88
PRCD-208	ENST00000590555	NUP155	O75694	1391 aa		33.05	■■■□□ 2.88
PRCD-208	ENST00000590555	SETD5	Q9C0A6	1442 aa		33.04	■■■□□ 2.88
PRCD-208	ENST00000590555	PZP	P20742	1482 aa		33.04	■■■□□ 2.88
PRCD-208	ENST00000590555	NPAT	Q14207	1427 aa		33.03	■■■□□ 2.88
PRCD-208	ENST00000590555	ACIN1	Q9UKV3	1341 aa	Known RBP	33.02	■■■□□ 2.88
PRCD-208	ENST00000590555	SETD1B	Q9UPS6	1966 aa	Known RBP	33.02	■■■□□ 2.88
PRCD-208	ENST00000590555	TRIM26	Q12899	539 aa	Predicted RBP	33.01	■■■□□ 2.87
PRCD-208	ENST00000590555	IQGAP3	Q86VI3	1631 aa		33.01	■■■□□ 2.87
PRCD-208	ENST00000590555	ARHGAP31	Q2M1Z3	1444 aa		33.01	■■■□□ 2.87
PRCD-208	ENST00000590555	TRIM52	Q96A61	297 aa		32.97	■■■□□ 2.87
PRCD-208	ENST00000590555	TET3	O43151	1660 aa		32.97	■■■□□ 2.87
PRCD-208	ENST00000590555	EFCAB6	Q5THR3	1501 aa		32.96	■■■□□ 2.87
PRCD-208	ENST00000590555	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.94	■■■□□ 2.86
PRCD-208	ENST00000590555	PREX1	Q8TCU6	1659 aa		32.91	■■■□□ 2.86
PRCD-208	ENST00000590555	RAB3GAP2	Q9H2M9	1393 aa		32.91	■■■□□ 2.86
PRCD-208	ENST00000590555	RPRD2	Q5VT52	1461 aa	Known RBP	32.91	■■■□□ 2.86
PRCD-208	ENST00000590555	CFAP65	Q6ZU64	1925 aa	Known RBP	32.89	■■■□□ 2.86
PRCD-208	ENST00000590555	UHRF1BP1	Q6BDS2	1440 aa		32.89	■■■□□ 2.86
PRCD-208	ENST00000590555	TNR	Q92752	1358 aa		32.89	■■■□□ 2.86
PRCD-208	ENST00000590555	ERVK-7	P63135	1459 aa		32.88	■■■□□ 2.85
PRCD-208	ENST00000590555	SPATA31D1	Q6ZQQ2	1576 aa		32.87	■■■□□ 2.85
PRCD-208	ENST00000590555	HRC	P23327	699 aa		32.86	■■■□□ 2.85
PRCD-208	ENST00000590555		E9PCH4	1651 aa		32.82	■■■□□ 2.84
PRCD-208	ENST00000590555	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.82	■■■□□ 2.84
PRCD-208	ENST00000590555	MYO3A	Q8NEV4	1616 aa		32.81	■■■□□ 2.84
PRCD-208	ENST00000590555	LMTK3	Q96Q04	1460 aa		32.8	■■■□□ 2.84
PRCD-208	ENST00000590555	NLRP1	Q9C000	1473 aa		32.79	■■■□□ 2.84
PRCD-208	ENST00000590555	NOS1	P29475	1434 aa		32.77	■■■□□ 2.84
PRCD-208	ENST00000590555	ZNF142	P52746	1687 aa	Predicted RBP	32.75	■■■□□ 2.83
PRCD-208	ENST00000590555	PKD2	Q13563	968 aa		32.74	■■■□□ 2.83
PRCD-208	ENST00000590555	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.74	■■■□□ 2.83
PRCD-208	ENST00000590555	A2ML1	A8K2U0	1454 aa		32.74	■■■□□ 2.83
PRCD-208	ENST00000590555	MPHOSPH9	Q99550	1183 aa		32.73	■■■□□ 2.83
PRCD-208	ENST00000590555	SLC52A1	Q9NWF4	448 aa		32.71	■■■□□ 2.83
PRCD-208	ENST00000590555	SYNM	O15061	1565 aa		32.7	■■■□□ 2.82
PRCD-208	ENST00000590555	SPHKAP	Q2M3C7	1700 aa		32.66	■■■□□ 2.82
PRCD-208	ENST00000590555	HSPA2	P54652	639 aa		32.66	■■■□□ 2.82
PRCD-208	ENST00000590555	PTPRT	O14522	1441 aa		32.65	■■■□□ 2.82
PRCD-208	ENST00000590555	UGGT1	Q9NYU2	1555 aa		32.65	■■■□□ 2.82
PRCD-208	ENST00000590555	IDI1	Q13907	227 aa		32.64	■■■□□ 2.82
PRCD-208	ENST00000590555	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.63	■■■□□ 2.81
PRCD-208	ENST00000590555	STAG3	Q9UJ98	1225 aa		32.62	■■■□□ 2.81
PRCD-208	ENST00000590555	PIK3C2B	O00750	1634 aa		32.59	■■■□□ 2.81
PRCD-208	ENST00000590555	TRPM2	O94759	1503 aa		32.58	■■■□□ 2.81
PRCD-208	ENST00000590555	KDM5A	P29375	1690 aa	Known RBP	32.57	■■■□□ 2.8
PRCD-208	ENST00000590555	UBR1	Q8IWV7	1749 aa		32.57	■■■□□ 2.8
PRCD-208	ENST00000590555	FOXD1	Q16676	465 aa		32.56	■■■□□ 2.8
PRCD-208	ENST00000590555	PCGF6	Q9BYE7	350 aa		32.54	■■■□□ 2.8
PRCD-208	ENST00000590555	PLA2R1	Q13018	1463 aa		32.54	■■■□□ 2.8
PRCD-208	ENST00000590555	ADGRB3	O60242	1522 aa		32.52	■■■□□ 2.8
PRCD-208	ENST00000590555	CHGA	P10645	457 aa	Known RBP	32.49	■■■□□ 2.79
PRCD-208	ENST00000590555	CLTCL1	P53675	1640 aa		32.47	■■■□□ 2.79
PRCD-208	ENST00000590555	TMEM131L	A2VDJ0	1609 aa		32.46	■■■□□ 2.79
PRCD-208	ENST00000590555	CCDC144A	A2RUR9	1427 aa		32.45	■■■□□ 2.79
PRCD-208	ENST00000590555	ANKLE2	Q86XL3	938 aa		32.45	■■■□□ 2.79
PRCD-208	ENST00000590555	STRC	Q7RTU9	1775 aa		32.44	■■■□□ 2.78
PRCD-208	ENST00000590555	KIF1B	O60333	1816 aa		32.43	■■■□□ 2.78
PRCD-208	ENST00000590555	DMRT2	Q9Y5R5	561 aa		32.43	■■■□□ 2.78
PRCD-208	ENST00000590555	TMEM2	Q9UHN6	1383 aa		32.43	■■■□□ 2.78
PRCD-208	ENST00000590555	SLIT1	O75093	1534 aa		32.42	■■■□□ 2.78
PRCD-208	ENST00000590555	EID1	Q9Y6B2	187 aa		32.41	■■■□□ 2.78
PRCD-208	ENST00000590555	MYO5B	Q9ULV0	1848 aa		32.41	■■■□□ 2.78
PRCD-208	ENST00000590555	ARHGAP23	Q9P227	1491 aa		32.41	■■■□□ 2.78
PRCD-208	ENST00000590555	NCKAP5L	Q9HCH0	1330 aa		32.4	■■■□□ 2.78
PRCD-208	ENST00000590555	POLR1A	O95602	1720 aa	Predicted RBP	32.4	■■■□□ 2.78
PRCD-208	ENST00000590555	HDGF	P51858	240 aa	Known RBP	32.39	■■■□□ 2.78
PRCD-208	ENST00000590555	ANKRD30B	Q9BXX2	1392 aa		32.38	■■■□□ 2.77
PRCD-208	ENST00000590555	TXNDC2	Q86VQ3	553 aa		32.36	■■■□□ 2.77
PRCD-208	ENST00000590555	ZNF326	Q5BKZ1	582 aa	Known RBP	32.34	■■■□□ 2.77
PRCD-208	ENST00000590555	SCAF11	Q99590	1463 aa	Known RBP	32.34	■■■□□ 2.77
PRCD-208	ENST00000590555	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.32	■■■□□ 2.76
PRCD-208	ENST00000590555	RIMS2	Q9UQ26	1411 aa		32.32	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms