RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 CLTCQ00610 1675 aaKnown RBP25.39■■□□□ 1.66
LSM14A-208ENST00000590416 ANKRD50Q9ULJ7 1429 aa25.39■■□□□ 1.66
LSM14A-208ENST00000590416 RNF17Q9BXT8 1623 aaKnown RBP25.39■■□□□ 1.66
LSM14A-208ENST00000590416 PTPRMP28827 1452 aa25.38■■□□□ 1.65
LSM14A-208ENST00000590416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.657e-8■■□□□ 12.9
LSM14A-208ENST00000590416 CNTLNQ9NXG0 1405 aa25.36■■□□□ 1.65
LSM14A-208ENST00000590416 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
LSM14A-208ENST00000590416 PPP6R1Q9UPN7 881 aa25.33■■□□□ 1.65
LSM14A-208ENST00000590416 WASHC2CQ9Y4E1 1318 aa25.33■■□□□ 1.64
LSM14A-208ENST00000590416 KDM5DQ9BY66 1539 aa25.32■■□□□ 1.64
LSM14A-208ENST00000590416 MROH2AA6NES4 1674 aa25.32■■□□□ 1.64
LSM14A-208ENST00000590416 MROH1Q8NDA8 1641 aa25.31■■□□□ 1.64
LSM14A-208ENST00000590416 CEP152O94986 1710 aa25.31■■□□□ 1.64
LSM14A-208ENST00000590416 KANK1Q14678 1352 aa25.31■■□□□ 1.64
LSM14A-208ENST00000590416 DEPDC5O75140 1603 aa25.3■■□□□ 1.64
LSM14A-208ENST00000590416 C3P01024 1663 aa25.3■■□□□ 1.64
LSM14A-208ENST00000590416 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
LSM14A-208ENST00000590416 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
LSM14A-208ENST00000590416 FAM135AQ9P2D6 1515 aa25.29■■□□□ 1.64
LSM14A-208ENST00000590416 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
LSM14A-208ENST00000590416 NAIPQ13075 1403 aa25.28■■□□□ 1.64
LSM14A-208ENST00000590416 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
LSM14A-208ENST00000590416 ZMYM3Q14202 1370 aa25.26■■□□□ 1.63
LSM14A-208ENST00000590416 ABCC3O15438 1527 aa25.25■■□□□ 1.63
LSM14A-208ENST00000590416 UNC13BO14795 1591 aa25.23■■□□□ 1.63
LSM14A-208ENST00000590416 CAMSAP1Q5T5Y3 1602 aa25.22■■□□□ 1.63
LSM14A-208ENST00000590416 CFAP65Q6ZU64 1925 aaKnown RBP25.18■■□□□ 1.62
LSM14A-208ENST00000590416 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
LSM14A-208ENST00000590416 NUP155O75694 1391 aa25.17■■□□□ 1.62
LSM14A-208ENST00000590416 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
LSM14A-208ENST00000590416 PZPP20742 1482 aa25.15■■□□□ 1.62
LSM14A-208ENST00000590416 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
LSM14A-208ENST00000590416 IQGAP3Q86VI3 1631 aa25.14■■□□□ 1.61
LSM14A-208ENST00000590416 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
LSM14A-208ENST00000590416 SETD1BQ9UPS6 1966 aaKnown RBP25.13■■□□□ 1.61
LSM14A-208ENST00000590416 TET3O43151 1660 aa25.12■■□□□ 1.61
LSM14A-208ENST00000590416 PREX1Q8TCU6 1659 aa25.11■■□□□ 1.61
LSM14A-208ENST00000590416 NPATQ14207 1427 aa25.11■■□□□ 1.61
LSM14A-208ENST00000590416 FBXO31Q5XUX0 539 aaPredicted RBP25.1■■□□□ 1.61
LSM14A-208ENST00000590416 EFCAB6Q5THR3 1501 aa25.1■■□□□ 1.61
LSM14A-208ENST00000590416 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
LSM14A-208ENST00000590416 UHRF1BP1Q6BDS2 1440 aa25.07■■□□□ 1.6
LSM14A-208ENST00000590416 TNRQ92752 1358 aa25.06■■□□□ 1.6
LSM14A-208ENST00000590416 ARHGAP31Q2M1Z3 1444 aa25.06■■□□□ 1.6
LSM14A-208ENST00000590416 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
LSM14A-208ENST00000590416 ERVK-7P63135 1459 aa25.05■■□□□ 1.6
LSM14A-208ENST00000590416 MYO3AQ8NEV4 1616 aa25.04■■□□□ 1.6
LSM14A-208ENST00000590416 SPATA31D1Q6ZQQ2 1576 aa25.03■■□□□ 1.6
LSM14A-208ENST00000590416 E9PCH4 1651 aa25.03■■□□□ 1.6
LSM14A-208ENST00000590416 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
LSM14A-208ENST00000590416 LMTK3Q96Q04 1460 aa24.99■■□□□ 1.59
LSM14A-208ENST00000590416 SLC4A1APQ9BWU0 796 aaKnown RBP24.99■■□□□ 1.59
LSM14A-208ENST00000590416 ACIN1Q9UKV3 1341 aaKnown RBP24.98■■□□□ 1.59
LSM14A-208ENST00000590416 ZNF142P52746 1687 aaPredicted RBP24.97■■□□□ 1.59
LSM14A-208ENST00000590416 CEP170BQ9Y4F5 1589 aaPredicted RBP24.96■■□□□ 1.59
LSM14A-208ENST00000590416 HSPA2P54652 639 aa24.94■■□□□ 1.58
LSM14A-208ENST00000590416 NLRP1Q9C000 1473 aa24.94■■□□□ 1.58
LSM14A-208ENST00000590416 PKD2Q13563 968 aa24.93■■□□□ 1.58
LSM14A-208ENST00000590416 A2ML1A8K2U0 1454 aa24.93■■□□□ 1.58
LSM14A-208ENST00000590416 SYNMO15061 1565 aa24.93■■□□□ 1.58
LSM14A-208ENST00000590416 NOS1P29475 1434 aa24.92■■□□□ 1.58
LSM14A-208ENST00000590416 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
LSM14A-208ENST00000590416 MPHOSPH9Q99550 1183 aa24.89■■□□□ 1.58
LSM14A-208ENST00000590416 HRCP23327 699 aa24.88■■□□□ 1.57
LSM14A-208ENST00000590416 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
LSM14A-208ENST00000590416 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
LSM14A-208ENST00000590416 PIK3C2BO00750 1634 aa24.87■■□□□ 1.57
LSM14A-208ENST00000590416 FOXD1Q16676 465 aa24.85■■□□□ 1.57
LSM14A-208ENST00000590416 IDI1Q13907 227 aa24.84■■□□□ 1.57
LSM14A-208ENST00000590416 SLC52A1Q9NWF4 448 aa24.84■■□□□ 1.57
LSM14A-208ENST00000590416 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
LSM14A-208ENST00000590416 CHGAP10645 457 aaKnown RBP24.82■■□□□ 1.56
LSM14A-208ENST00000590416 THEMISQ8N1K5 641 aaPredicted RBP24.81■■□□□ 1.56
LSM14A-208ENST00000590416 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
LSM14A-208ENST00000590416 TRPM2O94759 1503 aa24.81■■□□□ 1.56
LSM14A-208ENST00000590416 PTPRTO14522 1441 aa24.8■■□□□ 1.56
LSM14A-208ENST00000590416 ADGRB3O60242 1522 aa24.79■■□□□ 1.56
LSM14A-208ENST00000590416 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
LSM14A-208ENST00000590416 CLTCL1P53675 1640 aa24.76■■□□□ 1.55
LSM14A-208ENST00000590416 KDM5AP29375 1690 aaKnown RBP24.76■■□□□ 1.55
LSM14A-208ENST00000590416 KIF1BO60333 1816 aa24.75■■□□□ 1.55
LSM14A-208ENST00000590416 PLA2R1Q13018 1463 aa24.75■■□□□ 1.55
LSM14A-208ENST00000590416 STRCQ7RTU9 1775 aa24.74■■□□□ 1.55
LSM14A-208ENST00000590416 POLR1AO95602 1720 aaPredicted RBP24.73■■□□□ 1.55
LSM14A-208ENST00000590416 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
LSM14A-208ENST00000590416 NCKAP5LQ9HCH0 1330 aa24.72■■□□□ 1.55
LSM14A-208ENST00000590416 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
LSM14A-208ENST00000590416 ANKLE2Q86XL3 938 aa24.7■■□□□ 1.54
LSM14A-208ENST00000590416 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
LSM14A-208ENST00000590416 EID1Q9Y6B2 187 aa24.67■■□□□ 1.54
LSM14A-208ENST00000590416 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
LSM14A-208ENST00000590416 SLIT1O75093 1534 aa24.66■■□□□ 1.54
LSM14A-208ENST00000590416 TXNDC2Q86VQ3 553 aa24.65■■□□□ 1.54
LSM14A-208ENST00000590416 DMRT2Q9Y5R5 561 aa24.65■■□□□ 1.54
LSM14A-208ENST00000590416 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.54
LSM14A-208ENST00000590416 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.53
LSM14A-208ENST00000590416 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
LSM14A-208ENST00000590416 PPP1R15AO75807 674 aaPredicted RBP24.63■■□□□ 1.53
LSM14A-208ENST00000590416 HDGFP51858 240 aaKnown RBP24.61■■□□□ 1.53
LSM14A-208ENST00000590416 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms