RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 GGT6Q6P531 493 aa19.35■□□□□ 0.69
DDX39A-213ENST00000590315 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
DDX39A-213ENST00000590315 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
DDX39A-213ENST00000590315 ZC3H13Q5T200 1668 aaKnown RBP19.33■□□□□ 0.68
DDX39A-213ENST00000590315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.688e-8■■■□□ 18.3
DDX39A-213ENST00000590315 MROH1Q8NDA8 1641 aa19.31■□□□□ 0.68
DDX39A-213ENST00000590315 UNC13BO14795 1591 aa19.31■□□□□ 0.68
DDX39A-213ENST00000590315 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
DDX39A-213ENST00000590315 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
DDX39A-213ENST00000590315 HFM1A2PYH4 1435 aa19.3■□□□□ 0.68
DDX39A-213ENST00000590315 NAIPQ13075 1403 aa19.3■□□□□ 0.68
DDX39A-213ENST00000590315 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
DDX39A-213ENST00000590315 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-213ENST00000590315 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-213ENST00000590315 KDM5DQ9BY66 1539 aa19.29■□□□□ 0.68
DDX39A-213ENST00000590315 C3P01024 1663 aa19.28■□□□□ 0.68
DDX39A-213ENST00000590315 CAMSAP1Q5T5Y3 1602 aa19.28■□□□□ 0.68
DDX39A-213ENST00000590315 KANK1Q14678 1352 aa19.27■□□□□ 0.68
DDX39A-213ENST00000590315 KDM4FA0A1W2PPD8 638 aa19.24■□□□□ 0.67
DDX39A-213ENST00000590315 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
DDX39A-213ENST00000590315 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
DDX39A-213ENST00000590315 ABCC3O15438 1527 aa19.23■□□□□ 0.67
DDX39A-213ENST00000590315 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
DDX39A-213ENST00000590315 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
DDX39A-213ENST00000590315 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
DDX39A-213ENST00000590315 TET3O43151 1660 aa19.21■□□□□ 0.67
DDX39A-213ENST00000590315 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
DDX39A-213ENST00000590315 PTPRMP28827 1452 aa19.2■□□□□ 0.66
DDX39A-213ENST00000590315 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
DDX39A-213ENST00000590315 NUP155O75694 1391 aa19.18■□□□□ 0.66
DDX39A-213ENST00000590315 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
DDX39A-213ENST00000590315 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
DDX39A-213ENST00000590315 PREX1Q8TCU6 1659 aa19.16■□□□□ 0.66
DDX39A-213ENST00000590315 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
DDX39A-213ENST00000590315 E9PCH4 1651 aa19.15■□□□□ 0.66
DDX39A-213ENST00000590315 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-213ENST00000590315 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-213ENST00000590315 ZMYM3Q14202 1370 aa19.13■□□□□ 0.65
DDX39A-213ENST00000590315 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
DDX39A-213ENST00000590315 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
DDX39A-213ENST00000590315 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
DDX39A-213ENST00000590315 PZPP20742 1482 aa19.1■□□□□ 0.65
DDX39A-213ENST00000590315 MYO3AQ8NEV4 1616 aa19.09■□□□□ 0.65
DDX39A-213ENST00000590315 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
DDX39A-213ENST00000590315 NPATQ14207 1427 aa19.06■□□□□ 0.64
DDX39A-213ENST00000590315 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
DDX39A-213ENST00000590315 ERVK-7P63135 1459 aa19.05■□□□□ 0.64
DDX39A-213ENST00000590315 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
DDX39A-213ENST00000590315 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
DDX39A-213ENST00000590315 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
DDX39A-213ENST00000590315 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-213ENST00000590315 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
DDX39A-213ENST00000590315 TNRQ92752 1358 aa19.02■□□□□ 0.64
DDX39A-213ENST00000590315 ZNF142P52746 1687 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-213ENST00000590315 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
DDX39A-213ENST00000590315 SYNMO15061 1565 aa19.01■□□□□ 0.63
DDX39A-213ENST00000590315 PKD2Q13563 968 aa19■□□□□ 0.63
DDX39A-213ENST00000590315 KIF1BO60333 1816 aa19■□□□□ 0.63
DDX39A-213ENST00000590315 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
DDX39A-213ENST00000590315 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-213ENST00000590315 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
DDX39A-213ENST00000590315 PIK3C2BO00750 1634 aa18.98■□□□□ 0.63
DDX39A-213ENST00000590315 HRCP23327 699 aa18.96■□□□□ 0.63
DDX39A-213ENST00000590315 FOXD1Q16676 465 aa18.96■□□□□ 0.63
DDX39A-213ENST00000590315 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
DDX39A-213ENST00000590315 UBR1Q8IWV7 1749 aa18.95■□□□□ 0.62
DDX39A-213ENST00000590315 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
DDX39A-213ENST00000590315 TRPM2O94759 1503 aa18.94■□□□□ 0.62
DDX39A-213ENST00000590315 NOS1P29475 1434 aa18.93■□□□□ 0.62
DDX39A-213ENST00000590315 NLRP1Q9C000 1473 aa18.93■□□□□ 0.62
DDX39A-213ENST00000590315 A2ML1A8K2U0 1454 aa18.91■□□□□ 0.62
DDX39A-213ENST00000590315 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
DDX39A-213ENST00000590315 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
DDX39A-213ENST00000590315 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
DDX39A-213ENST00000590315 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
DDX39A-213ENST00000590315 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
DDX39A-213ENST00000590315 POLR1AO95602 1720 aaPredicted RBP18.89■□□□□ 0.61
DDX39A-213ENST00000590315 TMEM131LA2VDJ0 1609 aa18.86■□□□□ 0.61
DDX39A-213ENST00000590315 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
DDX39A-213ENST00000590315 PTPRTO14522 1441 aa18.86■□□□□ 0.61
DDX39A-213ENST00000590315 HSPA2P54652 639 aa18.84■□□□□ 0.61
DDX39A-213ENST00000590315 IDI1Q13907 227 aa18.84■□□□□ 0.61
DDX39A-213ENST00000590315 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
DDX39A-213ENST00000590315 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
DDX39A-213ENST00000590315 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
DDX39A-213ENST00000590315 STRCQ7RTU9 1775 aa18.79■□□□□ 0.6
DDX39A-213ENST00000590315 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
DDX39A-213ENST00000590315 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-213ENST00000590315 PPLO60437 1756 aa18.78■□□□□ 0.6
DDX39A-213ENST00000590315 ANKRD30BQ9BXX2 1392 aa18.77■□□□□ 0.6
DDX39A-213ENST00000590315 IFT172Q9UG01 1749 aa18.76■□□□□ 0.59
DDX39A-213ENST00000590315 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
DDX39A-213ENST00000590315 SLIT1O75093 1534 aa18.74■□□□□ 0.59
DDX39A-213ENST00000590315 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-213ENST00000590315 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
DDX39A-213ENST00000590315 RGL3Q3MIN7 710 aa18.72■□□□□ 0.59
DDX39A-213ENST00000590315 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-213ENST00000590315 EID1Q9Y6B2 187 aa18.72■□□□□ 0.59
DDX39A-213ENST00000590315 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
DDX39A-213ENST00000590315 TMEM2Q9UHN6 1383 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms