RNA–Protein interactions for RNA: ENST00000590205.2

CACNA1A-210, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-210ENST00000590205 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
CACNA1A-210ENST00000590205 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
CACNA1A-210ENST00000590205 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
CACNA1A-210ENST00000590205 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
CACNA1A-210ENST00000590205 EFCAB2Q5VUJ9 269 aa11.79□□□□□ -0.52
CACNA1A-210ENST00000590205 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
CACNA1A-210ENST00000590205 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
CACNA1A-210ENST00000590205 LAMC1P11047 1609 aa11.78□□□□□ -0.52
CACNA1A-210ENST00000590205 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-210ENST00000590205 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-210ENST00000590205 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
CACNA1A-210ENST00000590205 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
CACNA1A-210ENST00000590205 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
CACNA1A-210ENST00000590205 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
CACNA1A-210ENST00000590205 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
CACNA1A-210ENST00000590205 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
CACNA1A-210ENST00000590205 RTEL1-TNFRSF6BF6WH68 1400 aa11.73□□□□□ -0.53
CACNA1A-210ENST00000590205 UNC13BO14795 1591 aa11.73□□□□□ -0.53
CACNA1A-210ENST00000590205 CCDC141Q6ZP82 1450 aa11.73□□□□□ -0.53
CACNA1A-210ENST00000590205 ZNF644Q9H582 1327 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-210ENST00000590205 CFDP1Q9UEE9 299 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-210ENST00000590205 AGLP35573 1532 aa11.72□□□□□ -0.53
CACNA1A-210ENST00000590205 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-210ENST00000590205 ATP10AO60312 1499 aa11.71□□□□□ -0.54
CACNA1A-210ENST00000590205 ITGAEP38570 1179 aa11.7□□□□□ -0.54
CACNA1A-210ENST00000590205 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
CACNA1A-210ENST00000590205 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
CACNA1A-210ENST00000590205 EIF2AK4Q9P2K8 1649 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-210ENST00000590205 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
CACNA1A-210ENST00000590205 WASHC2AQ641Q2 1341 aa11.68□□□□□ -0.54
CACNA1A-210ENST00000590205 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
CACNA1A-210ENST00000590205 AEBP2Q6ZN18 517 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-210ENST00000590205 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-210ENST00000590205 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-210ENST00000590205 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.54
CACNA1A-210ENST00000590205 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
CACNA1A-210ENST00000590205 TRPM1Q7Z4N2 1603 aa11.67□□□□□ -0.54
CACNA1A-210ENST00000590205 RALGAPBQ86X10 1494 aa11.67□□□□□ -0.54
CACNA1A-210ENST00000590205 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
CACNA1A-210ENST00000590205 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
CACNA1A-210ENST00000590205 MPHOSPH9Q99550 1183 aa11.66□□□□□ -0.54
CACNA1A-210ENST00000590205 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-210ENST00000590205 IQGAP3Q86VI3 1631 aa11.65□□□□□ -0.54
CACNA1A-210ENST00000590205 MROH1Q8NDA8 1641 aa11.65□□□□□ -0.54
CACNA1A-210ENST00000590205 MADDQ8WXG6 1647 aa11.65□□□□□ -0.54
CACNA1A-210ENST00000590205 CCDC7Q96M83 1385 aa11.65□□□□□ -0.54
CACNA1A-210ENST00000590205 ARID4BQ4LE39 1312 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-210ENST00000590205 A2MP01023 1474 aa11.63□□□□□ -0.55
CACNA1A-210ENST00000590205 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-210ENST00000590205 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
CACNA1A-210ENST00000590205 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
CACNA1A-210ENST00000590205 DHX29Q7Z478 1369 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-210ENST00000590205 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
CACNA1A-210ENST00000590205 DUOX2Q9NRD8 1548 aa11.62□□□□□ -0.55
CACNA1A-210ENST00000590205 SPAG9O60271 1321 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-210ENST00000590205 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-210ENST00000590205 RIMS1Q86UR5 1692 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-210ENST00000590205 ANP32CO43423 234 aa11.6□□□□□ -0.55
CACNA1A-210ENST00000590205 C3P01024 1663 aa11.6□□□□□ -0.55
CACNA1A-210ENST00000590205 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
CACNA1A-210ENST00000590205 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-210ENST00000590205 HSPA5P11021 654 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-210ENST00000590205 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
CACNA1A-210ENST00000590205 CLTCQ00610 1675 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-210ENST00000590205 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
CACNA1A-210ENST00000590205 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
CACNA1A-210ENST00000590205 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-210ENST00000590205 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-210ENST00000590205 INSRP06213 1382 aa11.56□□□□□ -0.56
CACNA1A-210ENST00000590205 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
CACNA1A-210ENST00000590205 PTPRMP28827 1452 aa11.55□□□□□ -0.56
CACNA1A-210ENST00000590205 CEP152O94986 1710 aa11.55□□□□□ -0.56
CACNA1A-210ENST00000590205 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
CACNA1A-210ENST00000590205 RRP7BPQ9NSQ0 103 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 IQGAP1P46940 1657 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 LMTK2Q8IWU2 1503 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 GPRASP1Q5JY77 1395 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 ANKRD30AQ9BXX3 1397 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 PRKRIP1Q9H875 184 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-210ENST00000590205 KIF15Q9NS87 1388 aa11.52□□□□□ -0.56
CACNA1A-210ENST00000590205 ZBED9Q6R2W3 1325 aa11.52□□□□□ -0.57
CACNA1A-210ENST00000590205 ABCC3O15438 1527 aa11.52□□□□□ -0.57
CACNA1A-210ENST00000590205 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
CACNA1A-210ENST00000590205 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
CACNA1A-210ENST00000590205 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
CACNA1A-210ENST00000590205 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-210ENST00000590205 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
CACNA1A-210ENST00000590205 LRPPRCP42704 1394 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-210ENST00000590205 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-210ENST00000590205 IFT172Q9UG01 1749 aa11.49□□□□□ -0.57
CACNA1A-210ENST00000590205 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
CACNA1A-210ENST00000590205 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
CACNA1A-210ENST00000590205 PLA2R1Q13018 1463 aa11.49□□□□□ -0.57
CACNA1A-210ENST00000590205 TET3O43151 1660 aa11.48□□□□□ -0.57
CACNA1A-210ENST00000590205 SPATA31D1Q6ZQQ2 1576 aa11.47□□□□□ -0.57
CACNA1A-210ENST00000590205 MYO3AQ8NEV4 1616 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms