RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 DAPK1P53355 1430 aa32.05■■■□□ 2.72
CIRBP-226ENST00000590171 STRCQ7RTU9 1775 aa32.04■■■□□ 2.72
CIRBP-226ENST00000590171 DNMT1P26358 1616 aaKnown RBP32.04■■■□□ 2.72
CIRBP-226ENST00000590171 RNF17Q9BXT8 1623 aaKnown RBP32.03■■■□□ 2.72
CIRBP-226ENST00000590171 EIF2AK4Q9P2K8 1649 aaKnown RBP32.03■■■□□ 2.72
CIRBP-226ENST00000590171 MYO3AQ8NEV4 1616 aa32.02■■■□□ 2.72
CIRBP-226ENST00000590171 WASHC2CQ9Y4E1 1318 aa32.01■■■□□ 2.72
CIRBP-226ENST00000590171 DUOX2Q9NRD8 1548 aa32.01■■■□□ 2.72
CIRBP-226ENST00000590171 KIF15Q9NS87 1388 aa31.99■■■□□ 2.71
CIRBP-226ENST00000590171 PZPP20742 1482 aa31.97■■■□□ 2.71
CIRBP-226ENST00000590171 ZNF142P52746 1687 aaPredicted RBP31.97■■■□□ 2.71
CIRBP-226ENST00000590171 NCOA1Q15788 1441 aa31.96■■■□□ 2.71
CIRBP-226ENST00000590171 MROH1Q8NDA8 1641 aa31.96■■■□□ 2.71
CIRBP-226ENST00000590171 CEP170BQ9Y4F5 1589 aaPredicted RBP31.95■■■□□ 2.71
CIRBP-226ENST00000590171 FBXO31Q5XUX0 539 aaPredicted RBP31.94■■■□□ 2.7
CIRBP-226ENST00000590171 RRP7BPQ9NSQ0 103 aa31.94■■■□□ 2.7
CIRBP-226ENST00000590171 DMRT2Q9Y5R5 561 aa31.94■■■□□ 2.7
CIRBP-226ENST00000590171 CAMSAP1Q5T5Y3 1602 aa31.93■■■□□ 2.7
CIRBP-226ENST00000590171 ABCC3O15438 1527 aa31.93■■■□□ 2.7
CIRBP-226ENST00000590171 ERBINQ96RT1 1412 aa31.92■■■□□ 2.7
CIRBP-226ENST00000590171 ZC3H13Q5T200 1668 aaKnown RBP31.9■■■□□ 2.7
CIRBP-226ENST00000590171 CHIC2Q9UKJ5 165 aa31.9■■■□□ 2.7
CIRBP-226ENST00000590171 TNRQ92752 1358 aa31.9■■■□□ 2.7
CIRBP-226ENST00000590171 FAM50AQ14320 339 aaKnown RBP31.89■■■□□ 2.7
CIRBP-226ENST00000590171 PTPRTO14522 1441 aa31.89■■■□□ 2.7
CIRBP-226ENST00000590171 A2ML1A8K2U0 1454 aa31.87■■■□□ 2.69
CIRBP-226ENST00000590171 ANKRD30AQ9BXX3 1397 aa31.87■■■□□ 2.69
CIRBP-226ENST00000590171 PRDM15P57071 1507 aaPredicted RBP31.85■■■□□ 2.69
CIRBP-226ENST00000590171 PLA2R1Q13018 1463 aa31.84■■■□□ 2.69
CIRBP-226ENST00000590171 FBXO41Q8TF61 875 aa31.84■■■□□ 2.69
CIRBP-226ENST00000590171 ADGRL2O95490 1459 aa31.83■■■□□ 2.69
CIRBP-226ENST00000590171 CEP152O94986 1710 aa31.81■■■□□ 2.68
CIRBP-226ENST00000590171 NCKAP5LQ9HCH0 1330 aa31.8■■■□□ 2.68
CIRBP-226ENST00000590171 DEPDC5O75140 1603 aa31.79■■■□□ 2.68
CIRBP-226ENST00000590171 CERKQ8TCT0 537 aa31.78■■■□□ 2.68
CIRBP-226ENST00000590171 SPATA31D1Q6ZQQ2 1576 aa31.77■■■□□ 2.68
CIRBP-226ENST00000590171 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
CIRBP-226ENST00000590171 NLRP1Q9C000 1473 aa31.77■■■□□ 2.68
CIRBP-226ENST00000590171 ERVK-7P63135 1459 aa31.76■■■□□ 2.67
CIRBP-226ENST00000590171 PKD2Q13563 968 aa31.74■■■□□ 2.67
CIRBP-226ENST00000590171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.74■■■□□ 2.67
CIRBP-226ENST00000590171 ARHGAP31Q2M1Z3 1444 aa31.7■■■□□ 2.67
CIRBP-226ENST00000590171 KANK1Q14678 1352 aa31.69■■■□□ 2.66
CIRBP-226ENST00000590171 UGGT1Q9NYU2 1555 aa31.68■■■□□ 2.66
CIRBP-226ENST00000590171 VWDEQ8N2E2 1590 aa31.68■■■□□ 2.66
CIRBP-226ENST00000590171 ANKRD50Q9ULJ7 1429 aa31.66■■■□□ 2.66
CIRBP-226ENST00000590171 LTBP4Q8N2S1 1624 aa31.66■■■□□ 2.66
CIRBP-226ENST00000590171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.66■■■□□ 2.665e-6■■■□□ 18.7
CIRBP-226ENST00000590171 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
CIRBP-226ENST00000590171 THEMISQ8N1K5 641 aaPredicted RBP31.63■■■□□ 2.65
CIRBP-226ENST00000590171 NEURL4Q96JN8 1562 aa31.62■■■□□ 2.65
CIRBP-226ENST00000590171 POLR1AO95602 1720 aaPredicted RBP31.61■■■□□ 2.65
CIRBP-226ENST00000590171 ROCK1Q13464 1354 aa31.59■■■□□ 2.65
CIRBP-226ENST00000590171 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
CIRBP-226ENST00000590171 CFAP65Q6ZU64 1925 aaKnown RBP31.56■■■□□ 2.64
CIRBP-226ENST00000590171 ANKLE2Q86XL3 938 aa31.56■■■□□ 2.64
CIRBP-226ENST00000590171 EFCAB6Q5THR3 1501 aa31.55■■■□□ 2.64
CIRBP-226ENST00000590171 ITGAEP38570 1179 aa31.54■■■□□ 2.64
CIRBP-226ENST00000590171 UBR1Q8IWV7 1749 aa31.52■■■□□ 2.64
CIRBP-226ENST00000590171 MED14O60244 1454 aa31.5■■■□□ 2.63
CIRBP-226ENST00000590171 UNC13BO14795 1591 aa31.5■■■□□ 2.63
CIRBP-226ENST00000590171 RRBP1Q9P2E9 1410 aaKnown RBP31.49■■■□□ 2.63
CIRBP-226ENST00000590171 NPHP4O75161 1426 aaPredicted RBP31.48■■■□□ 2.63
CIRBP-226ENST00000590171 IQSEC2Q5JU85 1478 aa31.47■■■□□ 2.63
CIRBP-226ENST00000590171 NOS1P29475 1434 aa31.47■■■□□ 2.63
CIRBP-226ENST00000590171 SYNMO15061 1565 aa31.47■■■□□ 2.63
CIRBP-226ENST00000590171 PIK3C2BO00750 1634 aa31.46■■■□□ 2.63
CIRBP-226ENST00000590171 ARHGAP23Q9P227 1491 aa31.43■■■□□ 2.62
CIRBP-226ENST00000590171 TET3O43151 1660 aa31.43■■■□□ 2.62
CIRBP-226ENST00000590171 RPRD2Q5VT52 1461 aaKnown RBP31.42■■■□□ 2.62
CIRBP-226ENST00000590171 SLIT1O75093 1534 aa31.42■■■□□ 2.62
CIRBP-226ENST00000590171 IDI1Q13907 227 aa31.41■■■□□ 2.62
CIRBP-226ENST00000590171 IQGAP1P46940 1657 aa31.41■■■□□ 2.62
CIRBP-226ENST00000590171 SCAF11Q99590 1463 aaKnown RBP31.39■■■□□ 2.62
CIRBP-226ENST00000590171 GCC2Q8IWJ2 1684 aa31.36■■■□□ 2.61
CIRBP-226ENST00000590171 IQGAP3Q86VI3 1631 aa31.36■■■□□ 2.61
CIRBP-226ENST00000590171 LTKP29376 864 aa31.36■■■□□ 2.61
CIRBP-226ENST00000590171 KDM5AP29375 1690 aaKnown RBP31.35■■■□□ 2.61
CIRBP-226ENST00000590171 STAG3Q9UJ98 1225 aa31.35■■■□□ 2.61
CIRBP-226ENST00000590171 TMEM2Q9UHN6 1383 aa31.34■■■□□ 2.61
CIRBP-226ENST00000590171 TXNDC2Q86VQ3 553 aa31.33■■■□□ 2.61
CIRBP-226ENST00000590171 CPS1P31327 1500 aa31.33■■■□□ 2.61
CIRBP-226ENST00000590171 NUP155O75694 1391 aa31.32■■■□□ 2.6
CIRBP-226ENST00000590171 SLC52A1Q9NWF4 448 aa31.32■■■□□ 2.6
CIRBP-226ENST00000590171 ADGRB3O60242 1522 aa31.32■■■□□ 2.6
CIRBP-226ENST00000590171 E9PCH4 1651 aa31.3■■■□□ 2.6
CIRBP-226ENST00000590171 EID1Q9Y6B2 187 aa31.29■■■□□ 2.6
CIRBP-226ENST00000590171 NAIPQ13075 1403 aa31.25■■■□□ 2.59
CIRBP-226ENST00000590171 UBAP1LF5GYI3 381 aa31.22■■■□□ 2.59
CIRBP-226ENST00000590171 STRCP1A6NGW2 1772 aa31.2■■■□□ 2.59
CIRBP-226ENST00000590171 TMEM131LA2VDJ0 1609 aa31.17■■■□□ 2.58
CIRBP-226ENST00000590171 HFM1A2PYH4 1435 aa31.16■■■□□ 2.58
CIRBP-226ENST00000590171 ZFYVE9O95405 1425 aa31.15■■■□□ 2.58
CIRBP-226ENST00000590171 LRRC7Q96NW7 1537 aa31.14■■■□□ 2.58
CIRBP-226ENST00000590171 MYO5BQ9ULV0 1848 aa31.12■■■□□ 2.57
CIRBP-226ENST00000590171 RIMS2Q9UQ26 1411 aa31.11■■■□□ 2.57
CIRBP-226ENST00000590171 CHGAP10645 457 aaKnown RBP31.1■■■□□ 2.57
CIRBP-226ENST00000590171 SLC26A8Q96RN1 970 aa31.08■■■□□ 2.57
CIRBP-226ENST00000590171 SPHKAPQ2M3C7 1700 aa31.06■■■□□ 2.56
CIRBP-226ENST00000590171 TOM1O60784 492 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms