RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 ADGBQ8N7X0 1667 aa20.97■□□□□ 0.95
NEDD4L-227ENST00000590020 VWDEQ8N2E2 1590 aa20.96■□□□□ 0.95
NEDD4L-227ENST00000590020 TNRQ92752 1358 aa20.96■□□□□ 0.95
NEDD4L-227ENST00000590020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.951e-7■■□□□ 13.9
NEDD4L-227ENST00000590020 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
NEDD4L-227ENST00000590020 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
NEDD4L-227ENST00000590020 CCNB3Q8WWL7 1395 aa20.94■□□□□ 0.94
NEDD4L-227ENST00000590020 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
NEDD4L-227ENST00000590020 ANKLE2Q86XL3 938 aa20.91■□□□□ 0.94
NEDD4L-227ENST00000590020 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
NEDD4L-227ENST00000590020 STRCP1A6NGW2 1772 aa20.88■□□□□ 0.93
NEDD4L-227ENST00000590020 KIF3BO15066 747 aa20.88■□□□□ 0.93
NEDD4L-227ENST00000590020 PZPP20742 1482 aa20.87■□□□□ 0.93
NEDD4L-227ENST00000590020 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
NEDD4L-227ENST00000590020 RGS17Q9UGC6 210 aaPredicted RBP20.86■□□□□ 0.93
NEDD4L-227ENST00000590020 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
NEDD4L-227ENST00000590020 MBD5Q9P267 1494 aa20.85■□□□□ 0.93
NEDD4L-227ENST00000590020 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
NEDD4L-227ENST00000590020 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
NEDD4L-227ENST00000590020 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
NEDD4L-227ENST00000590020 IQGAP1P46940 1657 aa20.83■□□□□ 0.93
NEDD4L-227ENST00000590020 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
NEDD4L-227ENST00000590020 MIA2Q96PC5 1412 aa20.83■□□□□ 0.93
NEDD4L-227ENST00000590020 TIAM1Q13009 1591 aa20.83■□□□□ 0.92
NEDD4L-227ENST00000590020 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
NEDD4L-227ENST00000590020 MED14O60244 1454 aa20.82■□□□□ 0.92
NEDD4L-227ENST00000590020 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
NEDD4L-227ENST00000590020 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
NEDD4L-227ENST00000590020 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
NEDD4L-227ENST00000590020 RNF17Q9BXT8 1623 aaKnown RBP20.8■□□□□ 0.92
NEDD4L-227ENST00000590020 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
NEDD4L-227ENST00000590020 SYNMO15061 1565 aa20.75■□□□□ 0.91
NEDD4L-227ENST00000590020 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
NEDD4L-227ENST00000590020 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
NEDD4L-227ENST00000590020 ZC3H13Q5T200 1668 aaKnown RBP20.7■□□□□ 0.91
NEDD4L-227ENST00000590020 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
NEDD4L-227ENST00000590020 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
NEDD4L-227ENST00000590020 CAMSAP2Q08AD1 1489 aa20.69■□□□□ 0.9
NEDD4L-227ENST00000590020 ABCC3O15438 1527 aa20.66■□□□□ 0.9
NEDD4L-227ENST00000590020 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
NEDD4L-227ENST00000590020 CEP162Q5TB80 1403 aa20.65■□□□□ 0.9
NEDD4L-227ENST00000590020 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-227ENST00000590020 UBR1Q8IWV7 1749 aa20.64■□□□□ 0.9
NEDD4L-227ENST00000590020 LTKP29376 864 aa20.64■□□□□ 0.89
NEDD4L-227ENST00000590020 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.89
NEDD4L-227ENST00000590020 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
NEDD4L-227ENST00000590020 NCOA2Q15596 1464 aa20.62■□□□□ 0.89
NEDD4L-227ENST00000590020 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
NEDD4L-227ENST00000590020 CEP152O94986 1710 aa20.6■□□□□ 0.89
NEDD4L-227ENST00000590020 TSPY4P0CV99 314 aa20.59■□□□□ 0.89
NEDD4L-227ENST00000590020 TSPY10P0CW01 314 aa20.59■□□□□ 0.89
NEDD4L-227ENST00000590020 RSPH4AQ5TD94 716 aa20.58■□□□□ 0.89
NEDD4L-227ENST00000590020 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.89
NEDD4L-227ENST00000590020 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
NEDD4L-227ENST00000590020 MROH1Q8NDA8 1641 aa20.56■□□□□ 0.88
NEDD4L-227ENST00000590020 ARHGEF5Q12774 1597 aa20.56■□□□□ 0.88
NEDD4L-227ENST00000590020 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
NEDD4L-227ENST00000590020 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
NEDD4L-227ENST00000590020 SLIT1O75093 1534 aa20.54■□□□□ 0.88
NEDD4L-227ENST00000590020 TMEM94Q12767 1356 aa20.54■□□□□ 0.88
NEDD4L-227ENST00000590020 FOXD1Q16676 465 aa20.51■□□□□ 0.87
NEDD4L-227ENST00000590020 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
NEDD4L-227ENST00000590020 EIF2AK4Q9P2K8 1649 aaKnown RBP20.5■□□□□ 0.87
NEDD4L-227ENST00000590020 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
NEDD4L-227ENST00000590020 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
NEDD4L-227ENST00000590020 MAST1Q9Y2H9 1570 aa20.47■□□□□ 0.87
NEDD4L-227ENST00000590020 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
NEDD4L-227ENST00000590020 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
NEDD4L-227ENST00000590020 TMEM2Q9UHN6 1383 aa20.46■□□□□ 0.87
NEDD4L-227ENST00000590020 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
NEDD4L-227ENST00000590020 KCNA6P17658 529 aa20.44■□□□□ 0.86
NEDD4L-227ENST00000590020 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
NEDD4L-227ENST00000590020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.861e-6■■■□□ 16.2
NEDD4L-227ENST00000590020 LRRC9Q6ZRR7 1453 aa20.4■□□□□ 0.86
NEDD4L-227ENST00000590020 UPF1Q92900 1129 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEDD4L-227ENST00000590020 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
NEDD4L-227ENST00000590020 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
NEDD4L-227ENST00000590020 DUOX2Q9NRD8 1548 aa20.39■□□□□ 0.85
NEDD4L-227ENST00000590020 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
NEDD4L-227ENST00000590020 JCADQ9P266 1359 aa20.39■□□□□ 0.85
NEDD4L-227ENST00000590020 TET3O43151 1660 aa20.38■□□□□ 0.85
NEDD4L-227ENST00000590020 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
NEDD4L-227ENST00000590020 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
NEDD4L-227ENST00000590020 IDI1Q13907 227 aa20.37■□□□□ 0.85
NEDD4L-227ENST00000590020 LRP6O75581 1613 aa20.37■□□□□ 0.85
NEDD4L-227ENST00000590020 MSH6P52701 1360 aa20.36■□□□□ 0.85
NEDD4L-227ENST00000590020 BCANQ96GW7 911 aa20.36■□□□□ 0.85
NEDD4L-227ENST00000590020 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
NEDD4L-227ENST00000590020 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
NEDD4L-227ENST00000590020 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
NEDD4L-227ENST00000590020 MEX3CQ5U5Q3 659 aaKnown RBP20.34■□□□□ 0.85
NEDD4L-227ENST00000590020 COL16A1Q07092 1604 aaPredicted RBP20.34■□□□□ 0.85
NEDD4L-227ENST00000590020 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
NEDD4L-227ENST00000590020 KDM5AP29375 1690 aaKnown RBP20.31■□□□□ 0.84
NEDD4L-227ENST00000590020 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
NEDD4L-227ENST00000590020 MYOM3Q5VTT5 1437 aa20.29■□□□□ 0.84
NEDD4L-227ENST00000590020 ERBINQ96RT1 1412 aa20.29■□□□□ 0.84
NEDD4L-227ENST00000590020 ZNF772Q68DY9 489 aaPredicted RBP20.28■□□□□ 0.84
NEDD4L-227ENST00000590020 ADGRB3O60242 1522 aa20.27■□□□□ 0.84
NEDD4L-227ENST00000590020 KANK1Q14678 1352 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms