RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.74
SAFB2-204ENST00000589925 NPATQ14207 1427 aa25.88■■□□□ 1.73
SAFB2-204ENST00000589925 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
SAFB2-204ENST00000589925 RRP7BPQ9NSQ0 103 aa25.88■■□□□ 1.73
SAFB2-204ENST00000589925 CHIC2Q9UKJ5 165 aa25.87■■□□□ 1.73
SAFB2-204ENST00000589925 NCOA1Q15788 1441 aa25.87■■□□□ 1.73
SAFB2-204ENST00000589925 ERBINQ96RT1 1412 aa25.87■■□□□ 1.73
SAFB2-204ENST00000589925 ADGRL2O95490 1459 aa25.86■■□□□ 1.73
SAFB2-204ENST00000589925 ANKRD30AQ9BXX3 1397 aa25.86■■□□□ 1.73
SAFB2-204ENST00000589925 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
SAFB2-204ENST00000589925 HSPA2P54652 639 aa25.85■■□□□ 1.73
SAFB2-204ENST00000589925 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
SAFB2-204ENST00000589925 MROH1Q8NDA8 1641 aa25.84■■□□□ 1.73
SAFB2-204ENST00000589925 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
SAFB2-204ENST00000589925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.725e-6■■■■■ 46.2
SAFB2-204ENST00000589925 ABCC3O15438 1527 aa25.78■■□□□ 1.72
SAFB2-204ENST00000589925 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
SAFB2-204ENST00000589925 PZPP20742 1482 aa25.78■■□□□ 1.72
SAFB2-204ENST00000589925 PRDM15P57071 1507 aaPredicted RBP25.78■■□□□ 1.72
SAFB2-204ENST00000589925 ZC3H13Q5T200 1668 aaKnown RBP25.77■■□□□ 1.72
SAFB2-204ENST00000589925 DEPDC5O75140 1603 aa25.75■■□□□ 1.71
SAFB2-204ENST00000589925 RRBP1Q9P2E9 1410 aaKnown RBP25.75■■□□□ 1.71
SAFB2-204ENST00000589925 MYO3AQ8NEV4 1616 aa25.73■■□□□ 1.71
SAFB2-204ENST00000589925 ROCK1Q13464 1354 aa25.72■■□□□ 1.71
SAFB2-204ENST00000589925 FBXO31Q5XUX0 539 aaPredicted RBP25.72■■□□□ 1.71
SAFB2-204ENST00000589925 ANKRD50Q9ULJ7 1429 aa25.7■■□□□ 1.7
SAFB2-204ENST00000589925 ZNF142P52746 1687 aaPredicted RBP25.68■■□□□ 1.7
SAFB2-204ENST00000589925 CEP152O94986 1710 aa25.67■■□□□ 1.7
SAFB2-204ENST00000589925 CEP170BQ9Y4F5 1589 aaPredicted RBP25.67■■□□□ 1.7
SAFB2-204ENST00000589925 TNRQ92752 1358 aa25.67■■□□□ 1.7
SAFB2-204ENST00000589925 CAMSAP1Q5T5Y3 1602 aa25.66■■□□□ 1.7
SAFB2-204ENST00000589925 VWDEQ8N2E2 1590 aa25.66■■□□□ 1.7
SAFB2-204ENST00000589925 ITGAEP38570 1179 aa25.65■■□□□ 1.7
SAFB2-204ENST00000589925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.74e-7■■□□□ 12.9
SAFB2-204ENST00000589925 KANK1Q14678 1352 aa25.64■■□□□ 1.69
SAFB2-204ENST00000589925 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
SAFB2-204ENST00000589925 LMTK2Q8IWU2 1503 aa25.63■■□□□ 1.69
SAFB2-204ENST00000589925 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
SAFB2-204ENST00000589925 SPATA31D1Q6ZQQ2 1576 aa25.63■■□□□ 1.69
SAFB2-204ENST00000589925 STRCQ7RTU9 1775 aa25.62■■□□□ 1.69
SAFB2-204ENST00000589925 ERVK-7P63135 1459 aa25.61■■□□□ 1.69
SAFB2-204ENST00000589925 NLRP1Q9C000 1473 aa25.59■■□□□ 1.69
SAFB2-204ENST00000589925 PLA2R1Q13018 1463 aa25.57■■□□□ 1.68
SAFB2-204ENST00000589925 UNC13BO14795 1591 aa25.55■■□□□ 1.68
SAFB2-204ENST00000589925 EFCAB6Q5THR3 1501 aa25.54■■□□□ 1.68
SAFB2-204ENST00000589925 DMRT2Q9Y5R5 561 aa25.54■■□□□ 1.68
SAFB2-204ENST00000589925 PTPRTO14522 1441 aa25.51■■□□□ 1.67
SAFB2-204ENST00000589925 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
SAFB2-204ENST00000589925 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
SAFB2-204ENST00000589925 PKD2Q13563 968 aa25.47■■□□□ 1.67
SAFB2-204ENST00000589925 NAIPQ13075 1403 aa25.46■■□□□ 1.67
SAFB2-204ENST00000589925 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
SAFB2-204ENST00000589925 TET3O43151 1660 aa25.45■■□□□ 1.67
SAFB2-204ENST00000589925 THEMISQ8N1K5 641 aaPredicted RBP25.45■■□□□ 1.66
SAFB2-204ENST00000589925 NOS1P29475 1434 aa25.45■■□□□ 1.66
SAFB2-204ENST00000589925 IQGAP3Q86VI3 1631 aa25.45■■□□□ 1.66
SAFB2-204ENST00000589925 HFM1A2PYH4 1435 aa25.43■■□□□ 1.66
SAFB2-204ENST00000589925 SYNMO15061 1565 aa25.42■■□□□ 1.66
SAFB2-204ENST00000589925 NUP155O75694 1391 aa25.42■■□□□ 1.66
SAFB2-204ENST00000589925 GCC2Q8IWJ2 1684 aa25.42■■□□□ 1.66
SAFB2-204ENST00000589925 CFAP65Q6ZU64 1925 aaKnown RBP25.4■■□□□ 1.66
SAFB2-204ENST00000589925 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
SAFB2-204ENST00000589925 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
SAFB2-204ENST00000589925 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
SAFB2-204ENST00000589925 IDI1Q13907 227 aa25.36■■□□□ 1.65
SAFB2-204ENST00000589925 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
SAFB2-204ENST00000589925 POLR1AO95602 1720 aaPredicted RBP25.36■■□□□ 1.65
SAFB2-204ENST00000589925 E9PCH4 1651 aa25.36■■□□□ 1.65
SAFB2-204ENST00000589925 MED14O60244 1454 aa25.34■■□□□ 1.65
SAFB2-204ENST00000589925 SLC52A1Q9NWF4 448 aa25.33■■□□□ 1.65
SAFB2-204ENST00000589925 ARHGAP23Q9P227 1491 aa25.33■■□□□ 1.65
SAFB2-204ENST00000589925 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
SAFB2-204ENST00000589925 SLIT1O75093 1534 aa25.32■■□□□ 1.64
SAFB2-204ENST00000589925 CERKQ8TCT0 537 aa25.3■■□□□ 1.64
SAFB2-204ENST00000589925 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
SAFB2-204ENST00000589925 ADGRB3O60242 1522 aa25.29■■□□□ 1.64
SAFB2-204ENST00000589925 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
SAFB2-204ENST00000589925 TMEM2Q9UHN6 1383 aa25.28■■□□□ 1.64
SAFB2-204ENST00000589925 ILDR1Q86SU0 546 aaPredicted RBP25.27■■□□□ 1.64
SAFB2-204ENST00000589925 STAG3Q9UJ98 1225 aa25.27■■□□□ 1.64
SAFB2-204ENST00000589925 SCAF11Q99590 1463 aaKnown RBP25.27■■□□□ 1.64
SAFB2-204ENST00000589925 ZNF335Q9H4Z2 1342 aaPredicted RBP25.26■■□□□ 1.63
SAFB2-204ENST00000589925 LTKP29376 864 aa25.25■■□□□ 1.63
SAFB2-204ENST00000589925 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
SAFB2-204ENST00000589925 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
SAFB2-204ENST00000589925 FBXO41Q8TF61 875 aa25.22■■□□□ 1.63
SAFB2-204ENST00000589925 TMEM131LA2VDJ0 1609 aa25.2■■□□□ 1.62
SAFB2-204ENST00000589925 EID1Q9Y6B2 187 aa25.2■■□□□ 1.62
SAFB2-204ENST00000589925 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
SAFB2-204ENST00000589925 ZFYVE9O95405 1425 aa25.16■■□□□ 1.62
SAFB2-204ENST00000589925 SPHKAPQ2M3C7 1700 aa25.16■■□□□ 1.62
SAFB2-204ENST00000589925 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
SAFB2-204ENST00000589925 TRPM2O94759 1503 aa25.13■■□□□ 1.61
SAFB2-204ENST00000589925 SLC4A1APQ9BWU0 796 aaKnown RBP25.13■■□□□ 1.61
SAFB2-204ENST00000589925 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
SAFB2-204ENST00000589925 CPS1P31327 1500 aa25.11■■□□□ 1.61
SAFB2-204ENST00000589925 RIMS2Q9UQ26 1411 aa25.11■■□□□ 1.61
SAFB2-204ENST00000589925 MYO5BQ9ULV0 1848 aa25.1■■□□□ 1.61
SAFB2-204ENST00000589925 CHGAP10645 457 aaKnown RBP25.1■■□□□ 1.61
SAFB2-204ENST00000589925 CLTCL1P53675 1640 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms