RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
MBD1-221ENST00000589867 EIF2AK4Q9P2K8 1649 aaKnown RBP26.76■■□□□ 1.87
MBD1-221ENST00000589867 CHIC2Q9UKJ5 165 aa26.76■■□□□ 1.87
MBD1-221ENST00000589867 NCOA1Q15788 1441 aa26.75■■□□□ 1.87
MBD1-221ENST00000589867 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
MBD1-221ENST00000589867 PREX1Q8TCU6 1659 aa26.75■■□□□ 1.87
MBD1-221ENST00000589867 ADGRL2O95490 1459 aa26.74■■□□□ 1.87
MBD1-221ENST00000589867 HSPA2P54652 639 aa26.72■■□□□ 1.87
MBD1-221ENST00000589867 FAM135AQ9P2D6 1515 aa26.71■■□□□ 1.87
MBD1-221ENST00000589867 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.87
MBD1-221ENST00000589867 NPATQ14207 1427 aa26.7■■□□□ 1.86
MBD1-221ENST00000589867 ANKRD30AQ9BXX3 1397 aa26.7■■□□□ 1.86
MBD1-221ENST00000589867 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
MBD1-221ENST00000589867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.67■■□□□ 1.86
MBD1-221ENST00000589867 ABCC3O15438 1527 aa26.66■■□□□ 1.86
MBD1-221ENST00000589867 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
MBD1-221ENST00000589867 UHRF1BP1Q6BDS2 1440 aa26.65■■□□□ 1.86
MBD1-221ENST00000589867 DEPDC5O75140 1603 aa26.64■■□□□ 1.85
MBD1-221ENST00000589867 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
MBD1-221ENST00000589867 PRDM15P57071 1507 aaPredicted RBP26.63■■□□□ 1.85
MBD1-221ENST00000589867 PZPP20742 1482 aa26.62■■□□□ 1.85
MBD1-221ENST00000589867 FBXO31Q5XUX0 539 aaPredicted RBP26.61■■□□□ 1.85
MBD1-221ENST00000589867 CEP152O94986 1710 aa26.61■■□□□ 1.85
MBD1-221ENST00000589867 ZC3H13Q5T200 1668 aaKnown RBP26.6■■□□□ 1.85
MBD1-221ENST00000589867 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
MBD1-221ENST00000589867 VWDEQ8N2E2 1590 aa26.57■■□□□ 1.84
MBD1-221ENST00000589867 ROCK1Q13464 1354 aa26.57■■□□□ 1.84
MBD1-221ENST00000589867 STRCQ7RTU9 1775 aa26.56■■□□□ 1.84
MBD1-221ENST00000589867 ANKRD50Q9ULJ7 1429 aa26.55■■□□□ 1.84
MBD1-221ENST00000589867 CAMSAP1Q5T5Y3 1602 aa26.54■■□□□ 1.84
MBD1-221ENST00000589867 ZNF142P52746 1687 aaPredicted RBP26.54■■□□□ 1.84
MBD1-221ENST00000589867 ITGAEP38570 1179 aa26.52■■□□□ 1.84
MBD1-221ENST00000589867 CEP170BQ9Y4F5 1589 aaPredicted RBP26.5■■□□□ 1.83
MBD1-221ENST00000589867 TNRQ92752 1358 aa26.5■■□□□ 1.83
MBD1-221ENST00000589867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.5■■□□□ 1.83
MBD1-221ENST00000589867 SPATA31D1Q6ZQQ2 1576 aa26.5■■□□□ 1.83
MBD1-221ENST00000589867 CFAP65Q6ZU64 1925 aaKnown RBP26.49■■□□□ 1.83
MBD1-221ENST00000589867 LMTK2Q8IWU2 1503 aa26.49■■□□□ 1.83
MBD1-221ENST00000589867 ERVK-7P63135 1459 aa26.48■■□□□ 1.83
MBD1-221ENST00000589867 ARHGAP31Q2M1Z3 1444 aa26.48■■□□□ 1.83
MBD1-221ENST00000589867 A2ML1A8K2U0 1454 aa26.46■■□□□ 1.83
MBD1-221ENST00000589867 UNC13BO14795 1591 aa26.44■■□□□ 1.82
MBD1-221ENST00000589867 KANK1Q14678 1352 aa26.42■■□□□ 1.82
MBD1-221ENST00000589867 NLRP1Q9C000 1473 aa26.39■■□□□ 1.82
MBD1-221ENST00000589867 EFCAB6Q5THR3 1501 aa26.39■■□□□ 1.81
MBD1-221ENST00000589867 PLA2R1Q13018 1463 aa26.37■■□□□ 1.81
MBD1-221ENST00000589867 NAIPQ13075 1403 aa26.36■■□□□ 1.81
MBD1-221ENST00000589867 NCKAP5LQ9HCH0 1330 aa26.34■■□□□ 1.81
MBD1-221ENST00000589867 PTPRTO14522 1441 aa26.33■■□□□ 1.81
MBD1-221ENST00000589867 TET3O43151 1660 aa26.33■■□□□ 1.81
MBD1-221ENST00000589867 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
MBD1-221ENST00000589867 NOS1P29475 1434 aa26.32■■□□□ 1.8
MBD1-221ENST00000589867 SYNMO15061 1565 aa26.32■■□□□ 1.8
MBD1-221ENST00000589867 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
MBD1-221ENST00000589867 UGGT1Q9NYU2 1555 aa26.31■■□□□ 1.8
MBD1-221ENST00000589867 UBR1Q8IWV7 1749 aa26.28■■□□□ 1.8
MBD1-221ENST00000589867 HFM1A2PYH4 1435 aa26.28■■□□□ 1.8
MBD1-221ENST00000589867 DMRT2Q9Y5R5 561 aa26.27■■□□□ 1.8
MBD1-221ENST00000589867 RPRD2Q5VT52 1461 aaKnown RBP26.27■■□□□ 1.8
MBD1-221ENST00000589867 NEURL4Q96JN8 1562 aa26.27■■□□□ 1.8
MBD1-221ENST00000589867 E9PCH4 1651 aa26.27■■□□□ 1.8
MBD1-221ENST00000589867 NUP155O75694 1391 aa26.26■■□□□ 1.79
MBD1-221ENST00000589867 PKD2Q13563 968 aa26.25■■□□□ 1.79
MBD1-221ENST00000589867 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
MBD1-221ENST00000589867 IDI1Q13907 227 aa26.23■■□□□ 1.79
MBD1-221ENST00000589867 THEMISQ8N1K5 641 aaPredicted RBP26.23■■□□□ 1.79
MBD1-221ENST00000589867 POLR1AO95602 1720 aaPredicted RBP26.22■■□□□ 1.79
MBD1-221ENST00000589867 ARHGAP23Q9P227 1491 aa26.18■■□□□ 1.78
MBD1-221ENST00000589867 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
MBD1-221ENST00000589867 MED14O60244 1454 aa26.17■■□□□ 1.78
MBD1-221ENST00000589867 KDM5AP29375 1690 aaKnown RBP26.16■■□□□ 1.78
MBD1-221ENST00000589867 SLIT1O75093 1534 aa26.16■■□□□ 1.78
MBD1-221ENST00000589867 ANKLE2Q86XL3 938 aa26.15■■□□□ 1.78
MBD1-221ENST00000589867 LTKP29376 864 aa26.12■■□□□ 1.77
MBD1-221ENST00000589867 SLC52A1Q9NWF4 448 aa26.12■■□□□ 1.77
MBD1-221ENST00000589867 ADGRB3O60242 1522 aa26.12■■□□□ 1.77
MBD1-221ENST00000589867 MYO5BQ9ULV0 1848 aa26.11■■□□□ 1.77
MBD1-221ENST00000589867 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
MBD1-221ENST00000589867 ILDR1Q86SU0 546 aaPredicted RBP26.1■■□□□ 1.77
MBD1-221ENST00000589867 CERKQ8TCT0 537 aa26.1■■□□□ 1.77
MBD1-221ENST00000589867 NPHP4O75161 1426 aaPredicted RBP26.1■■□□□ 1.77
MBD1-221ENST00000589867 ZNF335Q9H4Z2 1342 aaPredicted RBP26.1■■□□□ 1.77
MBD1-221ENST00000589867 TMEM131LA2VDJ0 1609 aa26.08■■□□□ 1.77
MBD1-221ENST00000589867 SCAF11Q99590 1463 aaKnown RBP26.08■■□□□ 1.77
MBD1-221ENST00000589867 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
MBD1-221ENST00000589867 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
MBD1-221ENST00000589867 TXNDC2Q86VQ3 553 aa26.04■■□□□ 1.76
MBD1-221ENST00000589867 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
MBD1-221ENST00000589867 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
MBD1-221ENST00000589867 ZFYVE9O95405 1425 aa26.02■■□□□ 1.76
MBD1-221ENST00000589867 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
MBD1-221ENST00000589867 FBXO41Q8TF61 875 aa25.99■■□□□ 1.75
MBD1-221ENST00000589867 STRCP1A6NGW2 1772 aa25.98■■□□□ 1.75
MBD1-221ENST00000589867 TRPM2O94759 1503 aa25.98■■□□□ 1.75
MBD1-221ENST00000589867 CLTCL1P53675 1640 aa25.97■■□□□ 1.75
MBD1-221ENST00000589867 SLC4A1APQ9BWU0 796 aaKnown RBP25.95■■□□□ 1.74
MBD1-221ENST00000589867 EID1Q9Y6B2 187 aa25.95■■□□□ 1.74
MBD1-221ENST00000589867 RIMS2Q9UQ26 1411 aa25.94■■□□□ 1.74
MBD1-221ENST00000589867 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
MBD1-221ENST00000589867 CHGAP10645 457 aaKnown RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms