RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
H3F3B-207ENST00000589417 NPATQ14207 1427 aa26.99■■□□□ 1.91
H3F3B-207ENST00000589417 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
H3F3B-207ENST00000589417 EIF2AK4Q9P2K8 1649 aaKnown RBP26.98■■□□□ 1.91
H3F3B-207ENST00000589417 C3P01024 1663 aa26.98■■□□□ 1.91
H3F3B-207ENST00000589417 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
H3F3B-207ENST00000589417 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.91
H3F3B-207ENST00000589417 RNF17Q9BXT8 1623 aaKnown RBP26.94■■□□□ 1.9
H3F3B-207ENST00000589417 WASHC2CQ9Y4E1 1318 aa26.94■■□□□ 1.9
H3F3B-207ENST00000589417 PTPRKQ15262 1439 aa26.93■■□□□ 1.9
H3F3B-207ENST00000589417 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
H3F3B-207ENST00000589417 KDM5DQ9BY66 1539 aa26.93■■□□□ 1.9
H3F3B-207ENST00000589417 CLTCQ00610 1675 aaKnown RBP26.92■■□□□ 1.9
H3F3B-207ENST00000589417 ROCK1Q13464 1354 aa26.91■■□□□ 1.9
H3F3B-207ENST00000589417 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
H3F3B-207ENST00000589417 PREX1Q8TCU6 1659 aa26.88■■□□□ 1.89
H3F3B-207ENST00000589417 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
H3F3B-207ENST00000589417 PZPP20742 1482 aa26.86■■□□□ 1.89
H3F3B-207ENST00000589417 ABCC3O15438 1527 aa26.85■■□□□ 1.89
H3F3B-207ENST00000589417 HSPA2P54652 639 aa26.84■■□□□ 1.89
H3F3B-207ENST00000589417 ANKRD50Q9ULJ7 1429 aa26.83■■□□□ 1.89
H3F3B-207ENST00000589417 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
H3F3B-207ENST00000589417 DEPDC5O75140 1603 aa26.8■■□□□ 1.88
H3F3B-207ENST00000589417 ZC3H13Q5T200 1668 aaKnown RBP26.8■■□□□ 1.88
H3F3B-207ENST00000589417 FBXO31Q5XUX0 539 aaPredicted RBP26.79■■□□□ 1.88
H3F3B-207ENST00000589417 ARHGAP31Q2M1Z3 1444 aa26.78■■□□□ 1.88
H3F3B-207ENST00000589417 KANK1Q14678 1352 aa26.77■■□□□ 1.88
H3F3B-207ENST00000589417 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
H3F3B-207ENST00000589417 TNRQ92752 1358 aa26.75■■□□□ 1.87
H3F3B-207ENST00000589417 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
H3F3B-207ENST00000589417 ITGAEP38570 1179 aa26.73■■□□□ 1.87
H3F3B-207ENST00000589417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.73■■□□□ 1.87
H3F3B-207ENST00000589417 A2ML1A8K2U0 1454 aa26.69■■□□□ 1.86
H3F3B-207ENST00000589417 SPATA31D1Q6ZQQ2 1576 aa26.69■■□□□ 1.86
H3F3B-207ENST00000589417 MYO3AQ8NEV4 1616 aa26.68■■□□□ 1.86
H3F3B-207ENST00000589417 ERVK-7P63135 1459 aa26.68■■□□□ 1.86
H3F3B-207ENST00000589417 NLRP1Q9C000 1473 aa26.68■■□□□ 1.86
H3F3B-207ENST00000589417 DMRT2Q9Y5R5 561 aa26.67■■□□□ 1.86
H3F3B-207ENST00000589417 CAMSAP1Q5T5Y3 1602 aa26.67■■□□□ 1.86
H3F3B-207ENST00000589417 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
H3F3B-207ENST00000589417 ZNF142P52746 1687 aaPredicted RBP26.66■■□□□ 1.86
H3F3B-207ENST00000589417 CEP152O94986 1710 aa26.65■■□□□ 1.86
H3F3B-207ENST00000589417 PLA2R1Q13018 1463 aa26.64■■□□□ 1.86
H3F3B-207ENST00000589417 UNC13BO14795 1591 aa26.61■■□□□ 1.85
H3F3B-207ENST00000589417 NAIPQ13075 1403 aa26.6■■□□□ 1.85
H3F3B-207ENST00000589417 STRCQ7RTU9 1775 aa26.6■■□□□ 1.85
H3F3B-207ENST00000589417 PTPRTO14522 1441 aa26.59■■□□□ 1.85
H3F3B-207ENST00000589417 PKD2Q13563 968 aa26.59■■□□□ 1.85
H3F3B-207ENST00000589417 RPRD2Q5VT52 1461 aaKnown RBP26.58■■□□□ 1.85
H3F3B-207ENST00000589417 THEMISQ8N1K5 641 aaPredicted RBP26.58■■□□□ 1.85
H3F3B-207ENST00000589417 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.85
H3F3B-207ENST00000589417 HFM1A2PYH4 1435 aa26.57■■□□□ 1.84
H3F3B-207ENST00000589417 NOS1P29475 1434 aa26.56■■□□□ 1.84
H3F3B-207ENST00000589417 NUP155O75694 1391 aa26.55■■□□□ 1.84
H3F3B-207ENST00000589417 UGGT1Q9NYU2 1555 aa26.53■■□□□ 1.84
H3F3B-207ENST00000589417 NCKAP5LQ9HCH0 1330 aa26.51■■□□□ 1.83
H3F3B-207ENST00000589417 TET3O43151 1660 aa26.5■■□□□ 1.83
H3F3B-207ENST00000589417 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
H3F3B-207ENST00000589417 SLC52A1Q9NWF4 448 aa26.5■■□□□ 1.83
H3F3B-207ENST00000589417 IDI1Q13907 227 aa26.48■■□□□ 1.83
H3F3B-207ENST00000589417 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
H3F3B-207ENST00000589417 GCC2Q8IWJ2 1684 aa26.45■■□□□ 1.82
H3F3B-207ENST00000589417 SYNMO15061 1565 aa26.44■■□□□ 1.82
H3F3B-207ENST00000589417 CFAP65Q6ZU64 1925 aaKnown RBP26.42■■□□□ 1.82
H3F3B-207ENST00000589417 MED14O60244 1454 aa26.42■■□□□ 1.82
H3F3B-207ENST00000589417 ARHGAP23Q9P227 1491 aa26.4■■□□□ 1.82
H3F3B-207ENST00000589417 UBR1Q8IWV7 1749 aa26.39■■□□□ 1.82
H3F3B-207ENST00000589417 SLIT1O75093 1534 aa26.39■■□□□ 1.81
H3F3B-207ENST00000589417 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
H3F3B-207ENST00000589417 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
H3F3B-207ENST00000589417 E9PCH4 1651 aa26.38■■□□□ 1.81
H3F3B-207ENST00000589417 NEURL4Q96JN8 1562 aa26.37■■□□□ 1.81
H3F3B-207ENST00000589417 TMEM2Q9UHN6 1383 aa26.36■■□□□ 1.81
H3F3B-207ENST00000589417 PIK3C2BO00750 1634 aa26.36■■□□□ 1.81
H3F3B-207ENST00000589417 STAG3Q9UJ98 1225 aa26.34■■□□□ 1.81
H3F3B-207ENST00000589417 CERKQ8TCT0 537 aa26.33■■□□□ 1.81
H3F3B-207ENST00000589417 NPHP4O75161 1426 aaPredicted RBP26.32■■□□□ 1.8
H3F3B-207ENST00000589417 LTKP29376 864 aa26.32■■□□□ 1.8
H3F3B-207ENST00000589417 TXNDC2Q86VQ3 553 aa26.31■■□□□ 1.8
H3F3B-207ENST00000589417 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
H3F3B-207ENST00000589417 POLR1AO95602 1720 aaPredicted RBP26.31■■□□□ 1.8
H3F3B-207ENST00000589417 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
H3F3B-207ENST00000589417 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
H3F3B-207ENST00000589417 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
H3F3B-207ENST00000589417 EID1Q9Y6B2 187 aa26.3■■□□□ 1.8
H3F3B-207ENST00000589417 SETD5Q9C0A6 1442 aa26.29■■□□□ 1.8
H3F3B-207ENST00000589417 SLC4A1APQ9BWU0 796 aaKnown RBP26.26■■□□□ 1.79
H3F3B-207ENST00000589417 ZNF335Q9H4Z2 1342 aaPredicted RBP26.25■■□□□ 1.79
H3F3B-207ENST00000589417 FBXO41Q8TF61 875 aa26.24■■□□□ 1.79
H3F3B-207ENST00000589417 HDGFP51858 240 aaKnown RBP26.23■■□□□ 1.79
H3F3B-207ENST00000589417 TMEM131LA2VDJ0 1609 aa26.23■■□□□ 1.79
H3F3B-207ENST00000589417 ZFYVE9O95405 1425 aa26.22■■□□□ 1.79
H3F3B-207ENST00000589417 HRCP23327 699 aa26.22■■□□□ 1.79
H3F3B-207ENST00000589417 IQGAP1P46940 1657 aa26.2■■□□□ 1.78
H3F3B-207ENST00000589417 ILDR1Q86SU0 546 aaPredicted RBP26.2■■□□□ 1.78
H3F3B-207ENST00000589417 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
H3F3B-207ENST00000589417 MPHOSPH9Q99550 1183 aa26.19■■□□□ 1.78
H3F3B-207ENST00000589417 TRPM2O94759 1503 aa26.19■■□□□ 1.78
H3F3B-207ENST00000589417 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
H3F3B-207ENST00000589417 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms