RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 TRIM52Q96A61 297 aa21.27■■□□□ 1
GFAP-215ENST00000588957 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
GFAP-215ENST00000588957 MLECQ14165 292 aa21.25■□□□□ 0.99
GFAP-215ENST00000588957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.99
GFAP-215ENST00000588957 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
GFAP-215ENST00000588957 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
GFAP-215ENST00000588957 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
GFAP-215ENST00000588957 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
GFAP-215ENST00000588957 NUP155O75694 1391 aa21.23■□□□□ 0.99
GFAP-215ENST00000588957 CNTLNQ9NXG0 1405 aa21.22■□□□□ 0.99
GFAP-215ENST00000588957 RNF17Q9BXT8 1623 aaKnown RBP21.17■□□□□ 0.98
GFAP-215ENST00000588957 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
GFAP-215ENST00000588957 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.98
GFAP-215ENST00000588957 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.98
GFAP-215ENST00000588957 DEPDC5O75140 1603 aa21.13■□□□□ 0.97
GFAP-215ENST00000588957 UNC13BO14795 1591 aa21.13■□□□□ 0.97
GFAP-215ENST00000588957 MPHOSPH9Q99550 1183 aa21.12■□□□□ 0.97
GFAP-215ENST00000588957 LMTK2Q8IWU2 1503 aa21.1■□□□□ 0.97
GFAP-215ENST00000588957 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
GFAP-215ENST00000588957 ARHGAP31Q2M1Z3 1444 aa21.09■□□□□ 0.97
GFAP-215ENST00000588957 VWDEQ8N2E2 1590 aa21.08■□□□□ 0.97
GFAP-215ENST00000588957 ZC3H13Q5T200 1668 aaKnown RBP21.08■□□□□ 0.96
GFAP-215ENST00000588957 ABCC3O15438 1527 aa21.07■□□□□ 0.96
GFAP-215ENST00000588957 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
GFAP-215ENST00000588957 PKD2Q13563 968 aa21.06■□□□□ 0.96
GFAP-215ENST00000588957 MROH1Q8NDA8 1641 aa21.06■□□□□ 0.96
GFAP-215ENST00000588957 RPRD2Q5VT52 1461 aaKnown RBP21.06■□□□□ 0.96
GFAP-215ENST00000588957 IQGAP3Q86VI3 1631 aa21.05■□□□□ 0.96
GFAP-215ENST00000588957 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
GFAP-215ENST00000588957 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
GFAP-215ENST00000588957 PZPP20742 1482 aa21.01■□□□□ 0.95
GFAP-215ENST00000588957 TET3O43151 1660 aa21■□□□□ 0.95
GFAP-215ENST00000588957 SLC52A1Q9NWF4 448 aa21■□□□□ 0.95
GFAP-215ENST00000588957 FER1L4A9Z1Z3 1794 aa21■□□□□ 0.95
GFAP-215ENST00000588957 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
GFAP-215ENST00000588957 NPATQ14207 1427 aa20.98■□□□□ 0.95
GFAP-215ENST00000588957 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
GFAP-215ENST00000588957 MADDQ8WXG6 1647 aa20.97■□□□□ 0.95
GFAP-215ENST00000588957 CLTCQ00610 1675 aaKnown RBP20.96■□□□□ 0.95
GFAP-215ENST00000588957 PTPRMP28827 1452 aa20.96■□□□□ 0.95
GFAP-215ENST00000588957 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
GFAP-215ENST00000588957 CEBPAP49715 358 aaPredicted RBP20.95■□□□□ 0.94
GFAP-215ENST00000588957 CAMSAP1Q5T5Y3 1602 aa20.95■□□□□ 0.94
GFAP-215ENST00000588957 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
GFAP-215ENST00000588957 CEP152O94986 1710 aa20.92■□□□□ 0.94
GFAP-215ENST00000588957 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
GFAP-215ENST00000588957 RIMS1Q86UR5 1692 aaKnown RBP20.92■□□□□ 0.94
GFAP-215ENST00000588957 PTPRTO14522 1441 aa20.91■□□□□ 0.94
GFAP-215ENST00000588957 NOS1P29475 1434 aa20.91■□□□□ 0.94
GFAP-215ENST00000588957 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
GFAP-215ENST00000588957 TNRQ92752 1358 aa20.91■□□□□ 0.94
GFAP-215ENST00000588957 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
GFAP-215ENST00000588957 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
GFAP-215ENST00000588957 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.93
GFAP-215ENST00000588957 FOXD1Q16676 465 aa20.88■□□□□ 0.93
GFAP-215ENST00000588957 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
GFAP-215ENST00000588957 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
GFAP-215ENST00000588957 ANKRD30BQ9BXX2 1392 aa20.87■□□□□ 0.93
GFAP-215ENST00000588957 SPATA31D1Q6ZQQ2 1576 aa20.87■□□□□ 0.93
GFAP-215ENST00000588957 E9PCH4 1651 aa20.86■□□□□ 0.93
GFAP-215ENST00000588957 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
GFAP-215ENST00000588957 C3P01024 1663 aa20.86■□□□□ 0.93
GFAP-215ENST00000588957 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
GFAP-215ENST00000588957 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
GFAP-215ENST00000588957 IDI1Q13907 227 aa20.84■□□□□ 0.93
GFAP-215ENST00000588957 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.93
GFAP-215ENST00000588957 TRPM2O94759 1503 aa20.82■□□□□ 0.92
GFAP-215ENST00000588957 UHRF1BP1Q6BDS2 1440 aa20.81■□□□□ 0.92
GFAP-215ENST00000588957 PREX1Q8TCU6 1659 aa20.81■□□□□ 0.92
GFAP-215ENST00000588957 PLA2R1Q13018 1463 aa20.8■□□□□ 0.92
GFAP-215ENST00000588957 STAC3Q96MF2 364 aa20.79■□□□□ 0.92
GFAP-215ENST00000588957 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
GFAP-215ENST00000588957 SPHKAPQ2M3C7 1700 aa20.78■□□□□ 0.92
GFAP-215ENST00000588957 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
GFAP-215ENST00000588957 TIMELESSQ9UNS1 1208 aa20.77■□□□□ 0.92
GFAP-215ENST00000588957 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.91
GFAP-215ENST00000588957 A2ML1A8K2U0 1454 aa20.75■□□□□ 0.91
GFAP-215ENST00000588957 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.74■□□□□ 0.91
GFAP-215ENST00000588957 SYNMO15061 1565 aa20.73■□□□□ 0.91
GFAP-215ENST00000588957 ZNF326Q5BKZ1 582 aaKnown RBP20.73■□□□□ 0.91
GFAP-215ENST00000588957 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
GFAP-215ENST00000588957 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
GFAP-215ENST00000588957 UGGT1Q9NYU2 1555 aa20.7■□□□□ 0.9
GFAP-215ENST00000588957 PIK3C2BO00750 1634 aa20.7■□□□□ 0.9
GFAP-215ENST00000588957 NEURL4Q96JN8 1562 aa20.69■□□□□ 0.9
GFAP-215ENST00000588957 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
GFAP-215ENST00000588957 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
GFAP-215ENST00000588957 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
GFAP-215ENST00000588957 KDM5AP29375 1690 aaKnown RBP20.68■□□□□ 0.9
GFAP-215ENST00000588957 ANKLE2Q86XL3 938 aa20.68■□□□□ 0.9
GFAP-215ENST00000588957 CEP170BQ9Y4F5 1589 aaPredicted RBP20.68■□□□□ 0.9
GFAP-215ENST00000588957 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
GFAP-215ENST00000588957 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
GFAP-215ENST00000588957 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
GFAP-215ENST00000588957 CLTCL1P53675 1640 aa20.66■□□□□ 0.9
GFAP-215ENST00000588957 MYO3AQ8NEV4 1616 aa20.66■□□□□ 0.9
GFAP-215ENST00000588957 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
GFAP-215ENST00000588957 PPP1R15AO75807 674 aaPredicted RBP20.64■□□□□ 0.89
GFAP-215ENST00000588957 KIF1BO60333 1816 aa20.64■□□□□ 0.89
GFAP-215ENST00000588957 TXNDC2Q86VQ3 553 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms