RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 ROCK1Q13464 1354 aa13.96□□□□□ -0.18
ZNF440-206ENST00000588954 KIF3BO15066 747 aa13.95□□□□□ -0.18
ZNF440-206ENST00000588954 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
ZNF440-206ENST00000588954 ADGRL2O95490 1459 aa13.94□□□□□ -0.18
ZNF440-206ENST00000588954 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
ZNF440-206ENST00000588954 GGT6Q6P531 493 aa13.94□□□□□ -0.18
ZNF440-206ENST00000588954 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
ZNF440-206ENST00000588954 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
ZNF440-206ENST00000588954 BCORL1Q5H9F3 1711 aa13.91□□□□□ -0.18
ZNF440-206ENST00000588954 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
ZNF440-206ENST00000588954 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
ZNF440-206ENST00000588954 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.19
ZNF440-206ENST00000588954 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
ZNF440-206ENST00000588954 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
ZNF440-206ENST00000588954 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
ZNF440-206ENST00000588954 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
ZNF440-206ENST00000588954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF440-206ENST00000588954 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
ZNF440-206ENST00000588954 KANK1Q14678 1352 aa13.85□□□□□ -0.19
ZNF440-206ENST00000588954 HFM1A2PYH4 1435 aa13.84□□□□□ -0.19
ZNF440-206ENST00000588954 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
ZNF440-206ENST00000588954 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
ZNF440-206ENST00000588954 NAIPQ13075 1403 aa13.82□□□□□ -0.2
ZNF440-206ENST00000588954 PTPRMP28827 1452 aa13.82□□□□□ -0.2
ZNF440-206ENST00000588954 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
ZNF440-206ENST00000588954 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
ZNF440-206ENST00000588954 FAM135AQ9P2D6 1515 aa13.81□□□□□ -0.2
ZNF440-206ENST00000588954 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
ZNF440-206ENST00000588954 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
ZNF440-206ENST00000588954 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
ZNF440-206ENST00000588954 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
ZNF440-206ENST00000588954 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
ZNF440-206ENST00000588954 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
ZNF440-206ENST00000588954 NUP155O75694 1391 aa13.78□□□□□ -0.2
ZNF440-206ENST00000588954 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
ZNF440-206ENST00000588954 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
ZNF440-206ENST00000588954 GCC2Q8IWJ2 1684 aa13.78□□□□□ -0.2
ZNF440-206ENST00000588954 DEPDC5O75140 1603 aa13.77□□□□□ -0.21
ZNF440-206ENST00000588954 SETD5Q9C0A6 1442 aa13.77□□□□□ -0.21
ZNF440-206ENST00000588954 MROH2AA6NES4 1674 aa13.76□□□□□ -0.21
ZNF440-206ENST00000588954 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
ZNF440-206ENST00000588954 ABCC3O15438 1527 aa13.76□□□□□ -0.21
ZNF440-206ENST00000588954 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
ZNF440-206ENST00000588954 UNC13BO14795 1591 aa13.74□□□□□ -0.21
ZNF440-206ENST00000588954 LMTK2Q8IWU2 1503 aa13.73□□□□□ -0.21
ZNF440-206ENST00000588954 VWDEQ8N2E2 1590 aa13.72□□□□□ -0.21
ZNF440-206ENST00000588954 PZPP20742 1482 aa13.72□□□□□ -0.21
ZNF440-206ENST00000588954 C3P01024 1663 aa13.72□□□□□ -0.21
ZNF440-206ENST00000588954 NPATQ14207 1427 aa13.72□□□□□ -0.21
ZNF440-206ENST00000588954 ARHGAP31Q2M1Z3 1444 aa13.72□□□□□ -0.21
ZNF440-206ENST00000588954 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
ZNF440-206ENST00000588954 CEP152O94986 1710 aa13.71□□□□□ -0.21
ZNF440-206ENST00000588954 HRCP23327 699 aa13.71□□□□□ -0.21
ZNF440-206ENST00000588954 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
ZNF440-206ENST00000588954 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
ZNF440-206ENST00000588954 CAMSAP1Q5T5Y3 1602 aa13.7□□□□□ -0.22
ZNF440-206ENST00000588954 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
ZNF440-206ENST00000588954 TNRQ92752 1358 aa13.69□□□□□ -0.22
ZNF440-206ENST00000588954 SETD1BQ9UPS6 1966 aaKnown RBP13.68□□□□□ -0.22
ZNF440-206ENST00000588954 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
ZNF440-206ENST00000588954 TET3O43151 1660 aa13.67□□□□□ -0.22
ZNF440-206ENST00000588954 EFCAB6Q5THR3 1501 aa13.67□□□□□ -0.22
ZNF440-206ENST00000588954 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
ZNF440-206ENST00000588954 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
ZNF440-206ENST00000588954 ERVK-7P63135 1459 aa13.66□□□□□ -0.22
ZNF440-206ENST00000588954 PKD2Q13563 968 aa13.65□□□□□ -0.22
ZNF440-206ENST00000588954 SPATA31D1Q6ZQQ2 1576 aa13.63□□□□□ -0.23
ZNF440-206ENST00000588954 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
ZNF440-206ENST00000588954 PCGF6Q9BYE7 350 aa13.63□□□□□ -0.23
ZNF440-206ENST00000588954 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
ZNF440-206ENST00000588954 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
ZNF440-206ENST00000588954 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
ZNF440-206ENST00000588954 STAG3Q9UJ98 1225 aa13.62□□□□□ -0.23
ZNF440-206ENST00000588954 NOS1P29475 1434 aa13.61□□□□□ -0.23
ZNF440-206ENST00000588954 E9PCH4 1651 aa13.6□□□□□ -0.23
ZNF440-206ENST00000588954 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
ZNF440-206ENST00000588954 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
ZNF440-206ENST00000588954 IDI1Q13907 227 aa13.59□□□□□ -0.23
ZNF440-206ENST00000588954 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
ZNF440-206ENST00000588954 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
ZNF440-206ENST00000588954 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
ZNF440-206ENST00000588954 PTPRTO14522 1441 aa13.57□□□□□ -0.24
ZNF440-206ENST00000588954 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
ZNF440-206ENST00000588954 HSPA2P54652 639 aa13.57□□□□□ -0.24
ZNF440-206ENST00000588954 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
ZNF440-206ENST00000588954 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
ZNF440-206ENST00000588954 SYNMO15061 1565 aa13.55□□□□□ -0.24
ZNF440-206ENST00000588954 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
ZNF440-206ENST00000588954 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
ZNF440-206ENST00000588954 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
ZNF440-206ENST00000588954 TRPM2O94759 1503 aa13.53□□□□□ -0.24
ZNF440-206ENST00000588954 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
ZNF440-206ENST00000588954 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
ZNF440-206ENST00000588954 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
ZNF440-206ENST00000588954 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
ZNF440-206ENST00000588954 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
ZNF440-206ENST00000588954 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
ZNF440-206ENST00000588954 ADGRB3O60242 1522 aa13.49□□□□□ -0.25
ZNF440-206ENST00000588954 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
ZNF440-206ENST00000588954 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms