RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
CNN1-208ENST00000588935 WASHC2CQ9Y4E1 1318 aa21.83■■□□□ 1.09
CNN1-208ENST00000588935 HFM1A2PYH4 1435 aa21.83■■□□□ 1.09
CNN1-208ENST00000588935 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
CNN1-208ENST00000588935 FER1L4A9Z1Z3 1794 aa21.83■■□□□ 1.09
CNN1-208ENST00000588935 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
CNN1-208ENST00000588935 CEBPAP49715 358 aaPredicted RBP21.82■■□□□ 1.08
CNN1-208ENST00000588935 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
CNN1-208ENST00000588935 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
CNN1-208ENST00000588935 KANK1Q14678 1352 aa21.79■■□□□ 1.08
CNN1-208ENST00000588935 CLTCQ00610 1675 aaKnown RBP21.79■■□□□ 1.08
CNN1-208ENST00000588935 RNF17Q9BXT8 1623 aaKnown RBP21.78■■□□□ 1.08
CNN1-208ENST00000588935 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
CNN1-208ENST00000588935 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
CNN1-208ENST00000588935 MROH1Q8NDA8 1641 aa21.77■■□□□ 1.07
CNN1-208ENST00000588935 NUP155O75694 1391 aa21.76■■□□□ 1.07
CNN1-208ENST00000588935 CFAP65Q6ZU64 1925 aaKnown RBP21.76■■□□□ 1.07
CNN1-208ENST00000588935 CEP152O94986 1710 aa21.75■■□□□ 1.07
CNN1-208ENST00000588935 RAB3GAP2Q9H2M9 1393 aa21.74■■□□□ 1.07
CNN1-208ENST00000588935 ZMYM3Q14202 1370 aa21.74■■□□□ 1.07
CNN1-208ENST00000588935 DEPDC5O75140 1603 aa21.73■■□□□ 1.07
CNN1-208ENST00000588935 PTPRMP28827 1452 aa21.72■■□□□ 1.07
CNN1-208ENST00000588935 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
CNN1-208ENST00000588935 KDM5DQ9BY66 1539 aa21.71■■□□□ 1.07
CNN1-208ENST00000588935 CNTLNQ9NXG0 1405 aa21.71■■□□□ 1.07
CNN1-208ENST00000588935 ABCC3O15438 1527 aa21.7■■□□□ 1.07
CNN1-208ENST00000588935 PRDM15P57071 1507 aaPredicted RBP21.7■■□□□ 1.07
CNN1-208ENST00000588935 UNC13BO14795 1591 aa21.7■■□□□ 1.06
CNN1-208ENST00000588935 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
CNN1-208ENST00000588935 C3P01024 1663 aa21.67■■□□□ 1.06
CNN1-208ENST00000588935 SLC4A1APQ9BWU0 796 aaKnown RBP21.66■■□□□ 1.06
CNN1-208ENST00000588935 CAMSAP1Q5T5Y3 1602 aa21.65■■□□□ 1.06
CNN1-208ENST00000588935 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
CNN1-208ENST00000588935 MROH2AA6NES4 1674 aa21.64■■□□□ 1.05
CNN1-208ENST00000588935 ZC3H13Q5T200 1668 aaKnown RBP21.64■■□□□ 1.05
CNN1-208ENST00000588935 FAM135AQ9P2D6 1515 aa21.63■■□□□ 1.05
CNN1-208ENST00000588935 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
CNN1-208ENST00000588935 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
CNN1-208ENST00000588935 PKD2Q13563 968 aa21.61■■□□□ 1.05
CNN1-208ENST00000588935 FOXD1Q16676 465 aa21.61■■□□□ 1.05
CNN1-208ENST00000588935 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
CNN1-208ENST00000588935 PZPP20742 1482 aa21.59■■□□□ 1.05
CNN1-208ENST00000588935 HRCP23327 699 aa21.59■■□□□ 1.05
CNN1-208ENST00000588935 TET3O43151 1660 aa21.59■■□□□ 1.05
CNN1-208ENST00000588935 NPATQ14207 1427 aa21.58■■□□□ 1.05
CNN1-208ENST00000588935 E9PCH4 1651 aa21.56■■□□□ 1.04
CNN1-208ENST00000588935 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
CNN1-208ENST00000588935 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
CNN1-208ENST00000588935 EFCAB6Q5THR3 1501 aa21.55■■□□□ 1.04
CNN1-208ENST00000588935 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
CNN1-208ENST00000588935 TNRQ92752 1358 aa21.54■■□□□ 1.04
CNN1-208ENST00000588935 PREX1Q8TCU6 1659 aa21.53■■□□□ 1.04
CNN1-208ENST00000588935 ERVK-7P63135 1459 aa21.52■■□□□ 1.04
CNN1-208ENST00000588935 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
CNN1-208ENST00000588935 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
CNN1-208ENST00000588935 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
CNN1-208ENST00000588935 HSPA2P54652 639 aa21.46■■□□□ 1.03
CNN1-208ENST00000588935 IDI1Q13907 227 aa21.46■■□□□ 1.03
CNN1-208ENST00000588935 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
CNN1-208ENST00000588935 NOS1P29475 1434 aa21.46■■□□□ 1.03
CNN1-208ENST00000588935 UHRF1BP1Q6BDS2 1440 aa21.45■■□□□ 1.02
CNN1-208ENST00000588935 SYNMO15061 1565 aa21.44■■□□□ 1.02
CNN1-208ENST00000588935 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
CNN1-208ENST00000588935 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
CNN1-208ENST00000588935 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
CNN1-208ENST00000588935 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
CNN1-208ENST00000588935 PLA2R1Q13018 1463 aa21.39■■□□□ 1.02
CNN1-208ENST00000588935 PTPRTO14522 1441 aa21.39■■□□□ 1.02
CNN1-208ENST00000588935 A2ML1A8K2U0 1454 aa21.38■■□□□ 1.01
CNN1-208ENST00000588935 NLRP1Q9C000 1473 aa21.38■■□□□ 1.01
CNN1-208ENST00000588935 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
CNN1-208ENST00000588935 PIK3C2BO00750 1634 aa21.37■■□□□ 1.01
CNN1-208ENST00000588935 LMTK3Q96Q04 1460 aa21.37■■□□□ 1.01
CNN1-208ENST00000588935 CEP170BQ9Y4F5 1589 aaPredicted RBP21.36■■□□□ 1.01
CNN1-208ENST00000588935 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
CNN1-208ENST00000588935 CLTCL1P53675 1640 aa21.34■■□□□ 1.01
CNN1-208ENST00000588935 TRPM2O94759 1503 aa21.34■■□□□ 1.01
CNN1-208ENST00000588935 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
CNN1-208ENST00000588935 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
CNN1-208ENST00000588935 MYO5BQ9ULV0 1848 aa21.33■■□□□ 1.01
CNN1-208ENST00000588935 ANKRD30BQ9BXX2 1392 aa21.33■■□□□ 1
CNN1-208ENST00000588935 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
CNN1-208ENST00000588935 RGL3Q3MIN7 710 aa21.32■■□□□ 1
CNN1-208ENST00000588935 ZNF142P52746 1687 aaPredicted RBP21.31■■□□□ 1
CNN1-208ENST00000588935 NUTM2DQ5VT03 806 aaPredicted RBP21.31■■□□□ 1
CNN1-208ENST00000588935 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
CNN1-208ENST00000588935 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
CNN1-208ENST00000588935 NEUROD1Q13562 356 aa21.3■■□□□ 1
CNN1-208ENST00000588935 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
CNN1-208ENST00000588935 KIF1BO60333 1816 aa21.29■■□□□ 1
CNN1-208ENST00000588935 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
CNN1-208ENST00000588935 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
CNN1-208ENST00000588935 ADGRB3O60242 1522 aa21.26■□□□□ 0.99
CNN1-208ENST00000588935 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
CNN1-208ENST00000588935 ANKLE2Q86XL3 938 aa21.25■□□□□ 0.99
CNN1-208ENST00000588935 LTKP29376 864 aa21.23■□□□□ 0.99
CNN1-208ENST00000588935 BCANQ96GW7 911 aa21.23■□□□□ 0.99
CNN1-208ENST00000588935 EID1Q9Y6B2 187 aa21.23■□□□□ 0.99
CNN1-208ENST00000588935 TMEM2Q9UHN6 1383 aa21.23■□□□□ 0.99
CNN1-208ENST00000588935 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms